RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 ZNF317Q96PQ6 595 aaPredicted RBP8.64□□□□□ -1.03
VRK2-203ENST00000417641 PACSIN1Q9BY11 444 aa8.64□□□□□ -1.03
VRK2-203ENST00000417641 NUCKS1Q9H1E3 243 aaKnown RBP8.64□□□□□ -1.03
VRK2-203ENST00000417641 DNAJC5Q9H3Z4 198 aa8.64□□□□□ -1.03
VRK2-203ENST00000417641 A0A087X0T9 212 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 CCDC194A0A1B0GVG4 234 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 MYMKA6NI61 221 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 PHF20L1A8MW92 1017 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 USP17L12C9JPN9 530 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 USP17L21D6R901 530 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 STXBP3O00186 592 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 GSTA1P08263 222 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 OR52Z1P0C646 297 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 FAM228BP0C875 321 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 EZRP15311 586 aaKnown RBP8.63□□□□□ -1.03
VRK2-203ENST00000417641 CTNNA1P35221 906 aaKnown RBP8.63□□□□□ -1.03
VRK2-203ENST00000417641 USP11P51784 963 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 POU5F1Q01860 360 aaKnown RBP8.63□□□□□ -1.03
VRK2-203ENST00000417641 GRIK3Q13003 919 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 GRB10Q13322 594 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 NBPF9Q3BBW0 867 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 FAM83BQ5T0W9 1011 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 SFMBT2Q5VUG0 894 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 DPY19L2P1Q6NXN4 242 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 CRELD2Q6UXH1 353 aaPredicted RBP8.63□□□□□ -1.03
VRK2-203ENST00000417641 PIGWQ7Z7B1 504 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 CEP57Q86XR8 500 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 RASGEF1CQ8N431 466 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 LRRC57Q8N9N7 239 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 PBKQ96KB5 322 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 PNMA5Q96PV4 448 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 NOD2Q9HC29 1040 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 FBXL5Q9UKA1 691 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 ASAP1Q9ULH1 1129 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 NENFQ9UMX5 172 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 NOVA2Q9UNW9 492 aaKnown RBP8.63□□□□□ -1.03
VRK2-203ENST00000417641 SLC12A4Q9UP95 1085 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.63□□□□□ -1.03
VRK2-203ENST00000417641 ZNF142P52746 1687 aaPredicted RBP8.63□□□□□ -1.03
VRK2-203ENST00000417641 CCT8L1PA6NM43 557 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 ERVV-1B6SEH8 477 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 F8VZ95 297 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 CYTH3O43739 400 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 KIF4AO95239 1232 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 FGFR1OPO95684 399 aaKnown RBP8.63□□□□□ -1.03
VRK2-203ENST00000417641 HOXA7P31268 230 aaPredicted RBP8.63□□□□□ -1.03
VRK2-203ENST00000417641 AMPD3Q01432 767 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 MTMR3Q13615 1198 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 E2F5Q15329 346 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 C11orf91Q3C1V1 193 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 ACCSLQ4AC99 568 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 FAM47AQ5JRC9 791 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 SPDYCQ5MJ68 293 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 GKAP1Q5VSY0 366 aaPredicted RBP8.63□□□□□ -1.03
VRK2-203ENST00000417641 TMC3Q7Z5M5 1100 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 TBC1D5Q92609 795 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 SLC4A9Q96Q91 983 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 XPO6Q96QU8 1125 aaKnown RBP8.63□□□□□ -1.03
VRK2-203ENST00000417641 AIPL1Q9NZN9 384 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 STXBP5LQ9Y2K9 1186 aa8.63□□□□□ -1.03
VRK2-203ENST00000417641 SART1O43290 800 aaKnown RBP8.62□□□□□ -1.03
VRK2-203ENST00000417641 TRIM37O94972 964 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 STARD3NLO95772 234 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 SSBP05455 408 aaKnown RBP eCLIP8.62□□□□□ -1.03
VRK2-203ENST00000417641 CYP19A1P11511 503 aaPredicted RBP8.62□□□□□ -1.03
VRK2-203ENST00000417641 ALADP13716 330 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 KIF5BP33176 963 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 RNASE9P60153 205 aaKnown RBP8.62□□□□□ -1.03
VRK2-203ENST00000417641 MAGOHP61326 146 aaKnown RBP8.62□□□□□ -1.03
VRK2-203ENST00000417641 HLTFQ14527 1009 aaKnown RBP eCLIP8.62□□□□□ -1.03
VRK2-203ENST00000417641 GRM4Q14833 912 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 TDRD12Q587J7 1177 aaKnown RBP8.62□□□□□ -1.03
VRK2-203ENST00000417641 CHADLQ6NUI6 762 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 CACNA2D4Q7Z3S7 1137 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 CUL5Q93034 780 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 MAGOHBQ96A72 148 aaKnown RBP8.62□□□□□ -1.03
VRK2-203ENST00000417641 HOOK2Q96ED9 719 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 CHMP6Q96FZ7 201 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 SCLT1Q96NL6 688 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 FAM129AQ9BZQ8 928 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 ADAM7Q9H2U9 754 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 EPB41L4BQ9H329 900 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 NLRC4Q9NPP4 1024 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 TCP11L1Q9NUJ3 509 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 BARHL2Q9NY43 387 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 MAD2L2Q9UI95 211 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 ASAP2O43150 1006 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 DNA2P51530 1060 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 CLNS1AP54105 237 aaKnown RBP8.62□□□□□ -1.03
VRK2-203ENST00000417641 MARSP56192 900 aaKnown RBP8.62□□□□□ -1.03
VRK2-203ENST00000417641 ITIH4Q14624 930 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 RPS6KA1Q15418 735 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 SBK1Q52WX2 424 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 SLFN11Q7Z7L1 901 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 METTL13Q8N6R0 699 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 PIGBQ92521 554 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 GANQ9H2C0 597 aa8.62□□□□□ -1.03
VRK2-203ENST00000417641 CNOT10Q9H9A5 744 aaKnown RBP8.62□□□□□ -1.03
VRK2-203ENST00000417641 A0A0G2JS52 829 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 A0A1B0GUA9 196 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms