RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 DESP17661 470 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 PIP4K2AP48426 406 aaPredicted RBP7□□□□□ -1.29
CCNT1-202ENST00000417344 MAGOHP61326 146 aaKnown RBP7□□□□□ -1.29
CCNT1-202ENST00000417344 GRIN1Q05586 938 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 IDI1Q13907 227 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 KCNJ12Q14500 433 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 RASA3Q14644 834 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 ZRSR2Q15696 482 aaKnown RBP7□□□□□ -1.29
CCNT1-202ENST00000417344 CFAP221Q4G0U5 840 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 TCP11X2Q5H9J9 407 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 SESTD1Q86VW0 696 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 SMYD4Q8IYR2 804 aaPredicted RBP7□□□□□ -1.29
CCNT1-202ENST00000417344 PI4KAP1Q8N8J0 262 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 NKX2-3Q8TAU0 364 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 FBF1Q8TES7 1133 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 DYDC1Q8WWB3 177 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 MAGOHBQ96A72 148 aaKnown RBP7□□□□□ -1.29
CCNT1-202ENST00000417344 LRRC45Q96CN5 670 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 KLHL29Q96CT2 875 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 IFT43Q96FT9 208 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 ZNF317Q96PQ6 595 aaPredicted RBP7□□□□□ -1.29
CCNT1-202ENST00000417344 NDNQ99608 321 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 ECT2Q9H8V3 914 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 NHEJ1Q9H9Q4 299 aaPredicted RBP7□□□□□ -1.29
CCNT1-202ENST00000417344 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7□□□□□ -1.29
CCNT1-202ENST00000417344 ARHGEF3Q9NR81 526 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 ZNHIT6Q9NWK9 470 aaKnown RBP7□□□□□ -1.29
CCNT1-202ENST00000417344 C9orf78Q9NZ63 289 aaPredicted RBP7□□□□□ -1.29
CCNT1-202ENST00000417344 DLGAP2Q9P1A6 1054 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 FBXO2Q9UK22 296 aaPredicted RBP7□□□□□ -1.29
CCNT1-202ENST00000417344 CTNND2Q9UQB3 1225 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 STK38LQ9Y2H1 464 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 EID1Q9Y6B2 187 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 A0A0G2JLW4 131 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 USO1O60763 962 aaKnown RBP7□□□□□ -1.29
CCNT1-202ENST00000417344 UBOX5O94941 541 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 ACADSP16219 412 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 GNAZP19086 355 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 GBP1P32455 592 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 CYP27A1Q02318 531 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 DEUP1Q05D60 604 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 KCNH2Q12809 1159 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 TSHZ1Q6ZSZ6 1077 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 GPKOWQ92917 476 aaPredicted RBP eCLIP7□□□□□ -1.297e-6■■■■■ 33.4
CCNT1-202ENST00000417344 AIFM3Q96NN9 605 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 TRIM7Q9C029 511 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 PHACTR1Q9C0D0 580 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 RAB17Q9H0T7 212 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 SH2D4AQ9H788 454 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 PREBQ9HCU5 417 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 ABCF3Q9NUQ8 709 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 RNF14Q9UBS8 474 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 LRWD1Q9UFC0 647 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 TMCO1Q9UM00 188 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 GMEB1Q9Y692 573 aa7□□□□□ -1.29
CCNT1-202ENST00000417344 POGZQ7Z3K3 1410 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 A0A1W2PQC6 194 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 DCDC2CA8MYV0 355 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 COBLO75128 1261 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 MOCS3O95396 460 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 BAG3O95817 575 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 GSTA2P09210 222 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 PARP1P09874 1014 aaKnown RBP6.99□□□□□ -1.29
CCNT1-202ENST00000417344 INHBCP55103 352 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 TMEM62Q0P6H9 643 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 DPYDQ12882 1025 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 SPA17Q15506 151 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 UAP1Q16222 522 aaPredicted RBP6.99□□□□□ -1.29
CCNT1-202ENST00000417344 GALNTL6Q49A17 601 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 Q4G0T1 1027 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 OR52E8Q6IFG1 317 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 RAB11FIP4Q86YS3 637 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 FAM114A1Q8IWE2 563 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 KIF2BQ8N4N8 673 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 MB21D1Q8N884 522 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 GBP7Q8N8V2 638 aaPredicted RBP6.99□□□□□ -1.29
CCNT1-202ENST00000417344 EIF1ADQ8N9N8 165 aaKnown RBP6.99□□□□□ -1.29
CCNT1-202ENST00000417344 ANKLE1Q8NAG6 615 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 IFT74Q96LB3 600 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 GSDMAQ96QA5 445 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 TSPAN18Q96SJ8 248 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 MLXIPQ9HAP2 919 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 THRAP3Q9Y2W1 955 aaKnown RBP6.99□□□□□ -1.29
CCNT1-202ENST00000417344 MAP3K19Q56UN5 1328 aa6.99□□□□□ -1.29
CCNT1-202ENST00000417344 BCL9LQ86UU0 1499 aa6.98□□□□□ -1.29
CCNT1-202ENST00000417344 A0A0G2JS52 829 aa6.98□□□□□ -1.29
CCNT1-202ENST00000417344 NCK2O43639 380 aa6.98□□□□□ -1.29
CCNT1-202ENST00000417344 PRC1O43663 620 aa6.98□□□□□ -1.29
CCNT1-202ENST00000417344 HSPD1P10809 573 aaKnown RBP6.98□□□□□ -1.29
CCNT1-202ENST00000417344 RPL13P26373 211 aaKnown RBP6.98□□□□□ -1.29
CCNT1-202ENST00000417344 AFMP43652 599 aa6.98□□□□□ -1.29
CCNT1-202ENST00000417344 SF3A3Q12874 501 aaKnown RBP eCLIP6.98□□□□□ -1.29
CCNT1-202ENST00000417344 BNIP1Q12981 228 aa6.98□□□□□ -1.29
CCNT1-202ENST00000417344 PABPC4Q13310 644 aaKnown RBP eCLIP6.98□□□□□ -1.29
CCNT1-202ENST00000417344 MPP3Q13368 585 aa6.98□□□□□ -1.29
CCNT1-202ENST00000417344 TRIM29Q14134 588 aa6.98□□□□□ -1.29
CCNT1-202ENST00000417344 HLTFQ14527 1009 aaKnown RBP eCLIP6.98□□□□□ -1.29
CCNT1-202ENST00000417344 TRADDQ15628 312 aa6.98□□□□□ -1.29
CCNT1-202ENST00000417344 TSNAXIP1Q2TAA8 658 aa6.98□□□□□ -1.29
CCNT1-202ENST00000417344 FOXB2Q5VYV0 432 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms