RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 LGALS2P05162 132 aa17.89■□□□□ 0.45
ITGB1-204ENST00000417122 IQCF3P0C7M6 154 aa17.89■□□□□ 0.45
ITGB1-204ENST00000417122 CCT2P78371 535 aaKnown RBP17.89■□□□□ 0.45
ITGB1-204ENST00000417122 NTRK3Q16288 839 aa17.89■□□□□ 0.45
ITGB1-204ENST00000417122 CCDC155Q8N6L0 562 aa17.89■□□□□ 0.45
ITGB1-204ENST00000417122 CAGE1Q8TC20 777 aa17.89■□□□□ 0.45
ITGB1-204ENST00000417122 PGBD1Q96JS3 809 aa17.89■□□□□ 0.45
ITGB1-204ENST00000417122 FAM161BQ96MY7 647 aa17.89■□□□□ 0.45
ITGB1-204ENST00000417122 CTAGE1Q96RT6 745 aa17.89■□□□□ 0.45
ITGB1-204ENST00000417122 GPR20Q99678 358 aa17.89■□□□□ 0.45
ITGB1-204ENST00000417122 UPF3BQ9BZI7 483 aaKnown RBP17.89■□□□□ 0.45
ITGB1-204ENST00000417122 MTIF3Q9H2K0 278 aaKnown RBP17.89■□□□□ 0.45
ITGB1-204ENST00000417122 H3BRB1 525 aa17.88■□□□□ 0.45
ITGB1-204ENST00000417122 MAFGO15525 162 aa17.88■□□□□ 0.45
ITGB1-204ENST00000417122 ATP9AO75110 1047 aa17.88■□□□□ 0.45
ITGB1-204ENST00000417122 PFKMP08237 780 aa17.88■□□□□ 0.45
ITGB1-204ENST00000417122 KCNA2P16389 499 aa17.88■□□□□ 0.45
ITGB1-204ENST00000417122 RFC2P35250 354 aa17.88■□□□□ 0.45
ITGB1-204ENST00000417122 CLK2P49760 499 aaKnown RBP17.88■□□□□ 0.45
ITGB1-204ENST00000417122 AKAP17AQ02040 695 aaKnown RBP17.88■□□□□ 0.45
ITGB1-204ENST00000417122 SP4Q02446 784 aa17.88■□□□□ 0.45
ITGB1-204ENST00000417122 AP3B2Q13367 1082 aa17.88■□□□□ 0.45
ITGB1-204ENST00000417122 MTMR1Q13613 665 aa17.88■□□□□ 0.45
ITGB1-204ENST00000417122 PKN1Q16512 942 aa17.88■□□□□ 0.45
ITGB1-204ENST00000417122 OTOP2Q7RTS6 562 aa17.88■□□□□ 0.45
ITGB1-204ENST00000417122 DEFB128Q7Z7B8 93 aa17.88■□□□□ 0.45
ITGB1-204ENST00000417122 PHKBQ93100 1093 aa17.88■□□□□ 0.45
ITGB1-204ENST00000417122 VWCEQ96DN2 955 aa17.88■□□□□ 0.45
ITGB1-204ENST00000417122 ANO3Q9BYT9 981 aa17.88■□□□□ 0.45
ITGB1-204ENST00000417122 TUT1Q9H6E5 874 aaKnown RBP17.88■□□□□ 0.45
ITGB1-204ENST00000417122 JADE2Q9NQC1 790 aa17.88■□□□□ 0.45
ITGB1-204ENST00000417122 TMEM260Q9NX78 707 aa17.88■□□□□ 0.45
ITGB1-204ENST00000417122 TELO2Q9Y4R8 837 aa17.88■□□□□ 0.45
ITGB1-204ENST00000417122 CCDC12Q8WUD4 166 aaPredicted RBP17.87■□□□□ 0.45
ITGB1-204ENST00000417122 MXRA8Q9BRK3 442 aa17.87■□□□□ 0.45
ITGB1-204ENST00000417122 SLC26A6Q9BXS9 759 aa17.87■□□□□ 0.45
ITGB1-204ENST00000417122 RNF26Q9BY78 433 aaPredicted RBP17.87■□□□□ 0.45
ITGB1-204ENST00000417122 NCOA5Q9HCD5 579 aaKnown RBP17.87■□□□□ 0.45
ITGB1-204ENST00000417122 CXXC1Q9P0U4 656 aaPredicted RBP17.87■□□□□ 0.45
ITGB1-204ENST00000417122 ESYT2A0FGR8 921 aa17.86■□□□□ 0.45
ITGB1-204ENST00000417122 PPFIA3O75145 1194 aa17.86■□□□□ 0.45
ITGB1-204ENST00000417122 IFNAR1P17181 557 aa17.86■□□□□ 0.45
ITGB1-204ENST00000417122 ZNF200P98182 395 aaPredicted RBP17.86■□□□□ 0.45
ITGB1-204ENST00000417122 PTK7Q13308 1070 aa17.86■□□□□ 0.45
ITGB1-204ENST00000417122 UTP14CQ5TAP6 766 aaKnown RBP17.86■□□□□ 0.45
ITGB1-204ENST00000417122 JAKMIP3Q5VZ66 844 aa17.86■□□□□ 0.45
ITGB1-204ENST00000417122 AFAP1L1Q8TED9 768 aa17.86■□□□□ 0.45
ITGB1-204ENST00000417122 DHX38Q92620 1227 aaKnown RBP17.86■□□□□ 0.45
ITGB1-204ENST00000417122 ZNF274Q96GC6 653 aaPredicted RBP17.86■□□□□ 0.45
ITGB1-204ENST00000417122 LARP6Q9BRS8 491 aaKnown RBP17.86■□□□□ 0.45
ITGB1-204ENST00000417122 ZMYND12Q9H0C1 365 aa17.86■□□□□ 0.45
ITGB1-204ENST00000417122 SEMA6BQ9H3T3 888 aa17.86■□□□□ 0.45
ITGB1-204ENST00000417122 C6orf50Q9HD87 102 aa17.86■□□□□ 0.45
ITGB1-204ENST00000417122 PDRG1Q9NUG6 133 aa17.86■□□□□ 0.45
ITGB1-204ENST00000417122 PKD2L1Q9P0L9 805 aa17.86■□□□□ 0.45
ITGB1-204ENST00000417122 C17orf102A2RUQ5 167 aa17.85■□□□□ 0.45
ITGB1-204ENST00000417122 GRXCR1A8MXD5 290 aa17.85■□□□□ 0.45
ITGB1-204ENST00000417122 CKBP12277 381 aa17.85■□□□□ 0.45
ITGB1-204ENST00000417122 DNAJB2P25686 324 aa17.85■□□□□ 0.45
ITGB1-204ENST00000417122 SREBF1P36956 1147 aa17.85■□□□□ 0.45
ITGB1-204ENST00000417122 RBL2Q08999 1139 aa17.85■□□□□ 0.45
ITGB1-204ENST00000417122 HIC1Q14526 733 aa17.85■□□□□ 0.45
ITGB1-204ENST00000417122 TRIM50Q86XT4 487 aa17.85■□□□□ 0.45
ITGB1-204ENST00000417122 CYP2W1Q8TAV3 490 aa17.85■□□□□ 0.45
ITGB1-204ENST00000417122 GUCD1Q96NT3 240 aa17.85■□□□□ 0.45
ITGB1-204ENST00000417122 TTYH1Q9H313 450 aaPredicted RBP17.85■□□□□ 0.45
ITGB1-204ENST00000417122 KCNH7Q9NS40 1196 aa17.85■□□□□ 0.45
ITGB1-204ENST00000417122 ZNF215Q9UL58 517 aaPredicted RBP17.85■□□□□ 0.45
ITGB1-204ENST00000417122 TMEM265A0A087WTH1 108 aa17.84■□□□□ 0.45
ITGB1-204ENST00000417122 ZBBXA8MT70 800 aa17.84■□□□□ 0.45
ITGB1-204ENST00000417122 SMIM10L2AP0DMW4 78 aa17.84■□□□□ 0.45
ITGB1-204ENST00000417122 SMIM10L2BP0DMW5 78 aa17.84■□□□□ 0.45
ITGB1-204ENST00000417122 ACTN1P12814 892 aa17.84■□□□□ 0.45
ITGB1-204ENST00000417122 SELPP16109 830 aa17.84■□□□□ 0.45
ITGB1-204ENST00000417122 GNA11P29992 359 aa17.84■□□□□ 0.45
ITGB1-204ENST00000417122 TCF7P36402 384 aaPredicted RBP17.84■□□□□ 0.45
ITGB1-204ENST00000417122 ZNF76P36508 570 aa17.84■□□□□ 0.45
ITGB1-204ENST00000417122 CEP55Q53EZ4 464 aa17.84■□□□□ 0.45
ITGB1-204ENST00000417122 LRRC8DQ7L1W4 858 aa17.84■□□□□ 0.45
ITGB1-204ENST00000417122 SEPT1Q8WYJ6 367 aa17.84■□□□□ 0.45
ITGB1-204ENST00000417122 ATP6V0A1Q93050 837 aa17.84■□□□□ 0.45
ITGB1-204ENST00000417122 PBX4Q9BYU1 374 aa17.84■□□□□ 0.45
ITGB1-204ENST00000417122 FTOQ9C0B1 505 aaKnown RBP eCLIP17.84■□□□□ 0.45
ITGB1-204ENST00000417122 RNPEPQ9H4A4 650 aa17.84■□□□□ 0.45
ITGB1-204ENST00000417122 STXBP5LQ9Y2K9 1186 aa17.84■□□□□ 0.45
ITGB1-204ENST00000417122 SLC4A7Q9Y6M7 1214 aa17.84■□□□□ 0.45
ITGB1-204ENST00000417122 GSTTP1A0A1W2PQM5 241 aa17.83■□□□□ 0.44
ITGB1-204ENST00000417122 PARNO95453 639 aaKnown RBP17.83■□□□□ 0.44
ITGB1-204ENST00000417122 ARP10275 920 aa17.83■□□□□ 0.44
ITGB1-204ENST00000417122 HOXC8P31273 242 aa17.83■□□□□ 0.44
ITGB1-204ENST00000417122 PBX2P40425 430 aa17.83■□□□□ 0.44
ITGB1-204ENST00000417122 ANAPC15P60006 121 aa17.83■□□□□ 0.44
ITGB1-204ENST00000417122 ARHGAP4P98171 946 aa17.83■□□□□ 0.44
ITGB1-204ENST00000417122 SSRP1Q08945 709 aaKnown RBP17.83■□□□□ 0.44
ITGB1-204ENST00000417122 STK3Q13188 491 aa17.83■□□□□ 0.44
ITGB1-204ENST00000417122 MCTP2Q6DN12 878 aa17.83■□□□□ 0.44
ITGB1-204ENST00000417122 TRIM22Q8IYM9 498 aa17.83■□□□□ 0.44
ITGB1-204ENST00000417122 REXO1Q8N1G1 1221 aaKnown RBP17.83■□□□□ 0.44
ITGB1-204ENST00000417122 CCDC148Q8NFR7 591 aa17.83■□□□□ 0.44
ITGB1-204ENST00000417122 WNT8BQ93098 351 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms