RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 TRAF7Q6Q0C0 670 aa20.53■□□□□ 0.88
CPNE1-210ENST00000416778 MAFAQ8NHW3 353 aaPredicted RBP20.53■□□□□ 0.88
CPNE1-210ENST00000416778 PHOSPHO2Q8TCD6 241 aa20.53■□□□□ 0.88
CPNE1-210ENST00000416778 WNT8BQ93098 351 aa20.53■□□□□ 0.88
CPNE1-210ENST00000416778 NKX2-4Q9H2Z4 354 aa20.53■□□□□ 0.88
CPNE1-210ENST00000416778 PCDHA11Q9Y5I1 949 aa20.53■□□□□ 0.88
CPNE1-210ENST00000416778 UBIAD1Q9Y5Z9 338 aa20.53■□□□□ 0.88
CPNE1-210ENST00000416778 EYSQ5T1H1 3165 aa20.53■□□□□ 0.88
CPNE1-210ENST00000416778 CNTNAP5Q8WYK1 1306 aa20.53■□□□□ 0.88
CPNE1-210ENST00000416778 UNC80Q8N2C7 3258 aa20.52■□□□□ 0.88
CPNE1-210ENST00000416778 CXCL10P02778 98 aa20.52■□□□□ 0.88
CPNE1-210ENST00000416778 MYOGP15173 224 aa20.52■□□□□ 0.88
CPNE1-210ENST00000416778 HOXC8P31273 242 aa20.52■□□□□ 0.88
CPNE1-210ENST00000416778 ADD1P35611 737 aaKnown RBP20.52■□□□□ 0.88
CPNE1-210ENST00000416778 RCAN1P53805 252 aa20.52■□□□□ 0.88
CPNE1-210ENST00000416778 LRRC8DQ7L1W4 858 aa20.52■□□□□ 0.88
CPNE1-210ENST00000416778 FBXL16Q8N461 479 aa20.52■□□□□ 0.88
CPNE1-210ENST00000416778 GPRASP2Q96D09 838 aa20.52■□□□□ 0.88
CPNE1-210ENST00000416778 RNPEPQ9H4A4 650 aa20.52■□□□□ 0.88
CPNE1-210ENST00000416778 SLC28A3Q9HAS3 691 aa20.52■□□□□ 0.88
CPNE1-210ENST00000416778 PRUNE2Q8WUY3 3088 aa20.51■□□□□ 0.87
CPNE1-210ENST00000416778 NOP56O00567 594 aaKnown RBP20.51■□□□□ 0.87
CPNE1-210ENST00000416778 MAFGO15525 162 aa20.51■□□□□ 0.87
CPNE1-210ENST00000416778 NBNO60934 754 aa20.51■□□□□ 0.87
CPNE1-210ENST00000416778 PARNO95453 639 aaKnown RBP20.51■□□□□ 0.87
CPNE1-210ENST00000416778 ZNF618Q5T7W0 954 aa20.51■□□□□ 0.87
CPNE1-210ENST00000416778 Q6ZUG5 572 aa20.51■□□□□ 0.87
CPNE1-210ENST00000416778 SERINC5Q86VE9 423 aa20.51■□□□□ 0.87
CPNE1-210ENST00000416778 TEX2Q8IWB9 1127 aa20.51■□□□□ 0.87
CPNE1-210ENST00000416778 GIMAP8Q8ND71 665 aaPredicted RBP20.51■□□□□ 0.87
CPNE1-210ENST00000416778 JAKMIP1Q96N16 626 aaKnown RBP20.51■□□□□ 0.87
CPNE1-210ENST00000416778 RIC8AQ9NPQ8 531 aa20.51■□□□□ 0.87
CPNE1-210ENST00000416778 JADE2Q9NQC1 790 aa20.51■□□□□ 0.87
CPNE1-210ENST00000416778 SPDYE3A6NKU9 549 aa20.5■□□□□ 0.87
CPNE1-210ENST00000416778 GOLGA8AA7E2F4 631 aa20.5■□□□□ 0.87
CPNE1-210ENST00000416778 GOLGA8BA8MQT2 603 aa20.5■□□□□ 0.87
CPNE1-210ENST00000416778 DLL1O00548 723 aa20.5■□□□□ 0.87
CPNE1-210ENST00000416778 SMIM10L2AP0DMW4 78 aa20.5■□□□□ 0.87
CPNE1-210ENST00000416778 SMIM10L2BP0DMW5 78 aa20.5■□□□□ 0.87
CPNE1-210ENST00000416778 KCNA2P16389 499 aa20.5■□□□□ 0.87
CPNE1-210ENST00000416778 APOBRQ0VD83 1088 aa20.5■□□□□ 0.87
CPNE1-210ENST00000416778 CDHR1Q96JP9 859 aa20.5■□□□□ 0.87
CPNE1-210ENST00000416778 PRDM12Q9H4Q4 367 aa20.5■□□□□ 0.87
CPNE1-210ENST00000416778 TRIP12Q14669 1992 aaPredicted RBP20.49■□□□□ 0.87
CPNE1-210ENST00000416778 C17orf102A2RUQ5 167 aa20.49■□□□□ 0.87
CPNE1-210ENST00000416778 SMCO2A6NFE2 343 aa20.49■□□□□ 0.87
CPNE1-210ENST00000416778 STXBP3O00186 592 aa20.49■□□□□ 0.87
CPNE1-210ENST00000416778 NAPAP54920 295 aa20.49■□□□□ 0.87
CPNE1-210ENST00000416778 MBTPS1Q14703 1052 aa20.49■□□□□ 0.87
CPNE1-210ENST00000416778 TCTN1Q2MV58 587 aa20.49■□□□□ 0.87
CPNE1-210ENST00000416778 UTP14CQ5TAP6 766 aaKnown RBP20.49■□□□□ 0.87
CPNE1-210ENST00000416778 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.49■□□□□ 0.87
CPNE1-210ENST00000416778 ATP6V0A1Q93050 837 aa20.49■□□□□ 0.87
CPNE1-210ENST00000416778 AGXT2Q9BYV1 514 aa20.49■□□□□ 0.87
CPNE1-210ENST00000416778 BARHL2Q9NY43 387 aa20.49■□□□□ 0.87
CPNE1-210ENST00000416778 SCN5AQ14524 2016 aa20.49■□□□□ 0.87
CPNE1-210ENST00000416778 TET1Q8NFU7 2136 aa20.48■□□□□ 0.87
CPNE1-210ENST00000416778 CHD7Q9P2D1 2997 aa20.48■□□□□ 0.87
CPNE1-210ENST00000416778 GSTTP1A0A1W2PQM5 241 aa20.48■□□□□ 0.87
CPNE1-210ENST00000416778 RBAK-RBAKDNI3L0D1 243 aa20.48■□□□□ 0.87
CPNE1-210ENST00000416778 TREHO43280 583 aa20.48■□□□□ 0.87
CPNE1-210ENST00000416778 BAIAP3O94812 1187 aa20.48■□□□□ 0.87
CPNE1-210ENST00000416778 REC8O95072 547 aa20.48■□□□□ 0.87
CPNE1-210ENST00000416778 FOSP01100 380 aaPredicted RBP20.48■□□□□ 0.87
CPNE1-210ENST00000416778 RPS6KB1P23443 525 aa20.48■□□□□ 0.87
CPNE1-210ENST00000416778 ADAM17P78536 824 aa20.48■□□□□ 0.87
CPNE1-210ENST00000416778 FGD1P98174 961 aa20.48■□□□□ 0.87
CPNE1-210ENST00000416778 ADGRE1Q14246 886 aa20.48■□□□□ 0.87
CPNE1-210ENST00000416778 BLOC1S2Q6QNY1 142 aa20.48■□□□□ 0.87
CPNE1-210ENST00000416778 CYP2W1Q8TAV3 490 aa20.48■□□□□ 0.87
CPNE1-210ENST00000416778 SEPT1Q8WYJ6 367 aa20.48■□□□□ 0.87
CPNE1-210ENST00000416778 BRF1Q92994 677 aa20.48■□□□□ 0.87
CPNE1-210ENST00000416778 SLC9A7Q96T83 725 aa20.48■□□□□ 0.87
CPNE1-210ENST00000416778 SETD4Q9NVD3 440 aa20.48■□□□□ 0.87
CPNE1-210ENST00000416778 CCDC196A0A1B0GTZ2 297 aa20.47■□□□□ 0.87
CPNE1-210ENST00000416778 SP4Q02446 784 aa20.47■□□□□ 0.87
CPNE1-210ENST00000416778 MTMR1Q13613 665 aa20.47■□□□□ 0.87
CPNE1-210ENST00000416778 PPP1R18Q6NYC8 613 aa20.47■□□□□ 0.87
CPNE1-210ENST00000416778 CNKSR3Q6P9H4 555 aa20.47■□□□□ 0.87
CPNE1-210ENST00000416778 TRIM50Q86XT4 487 aa20.47■□□□□ 0.87
CPNE1-210ENST00000416778 HERC6Q8IVU3 1022 aa20.47■□□□□ 0.87
CPNE1-210ENST00000416778 MXRA8Q9BRK3 442 aa20.47■□□□□ 0.87
CPNE1-210ENST00000416778 NAP1L2Q9ULW6 460 aaPredicted RBP20.47■□□□□ 0.87
CPNE1-210ENST00000416778 MYO9BQ13459 2157 aa20.46■□□□□ 0.87
CPNE1-210ENST00000416778 RSPH10B2B2RC85 870 aa20.46■□□□□ 0.87
CPNE1-210ENST00000416778 hCG_1984214I3L0E3 225 aa20.46■□□□□ 0.87
CPNE1-210ENST00000416778 EPB41L2O43491 1005 aaKnown RBP20.46■□□□□ 0.87
CPNE1-210ENST00000416778 RSPH10BP0C881 870 aa20.46■□□□□ 0.87
CPNE1-210ENST00000416778 PSMA5P28066 241 aa20.46■□□□□ 0.87
CPNE1-210ENST00000416778 TCF7P36402 384 aaPredicted RBP20.46■□□□□ 0.87
CPNE1-210ENST00000416778 THPOP40225 353 aa20.46■□□□□ 0.87
CPNE1-210ENST00000416778 CLK2P49760 499 aaKnown RBP20.46■□□□□ 0.87
CPNE1-210ENST00000416778 METAP2P50579 478 aaKnown RBP eCLIP20.46■□□□□ 0.87
CPNE1-210ENST00000416778 ADCY7P51828 1080 aa20.46■□□□□ 0.87
CPNE1-210ENST00000416778 PFKFB3Q16875 520 aaPredicted RBP20.46■□□□□ 0.87
CPNE1-210ENST00000416778 ZNF713Q8N859 430 aaPredicted RBP20.46■□□□□ 0.87
CPNE1-210ENST00000416778 KCNH7Q9NS40 1196 aa20.46■□□□□ 0.87
CPNE1-210ENST00000416778 ABHD14A-ACY1A0A1B0GW23 586 aa20.45■□□□□ 0.86
CPNE1-210ENST00000416778 PRPF3O43395 683 aaKnown RBP20.45■□□□□ 0.86
CPNE1-210ENST00000416778 GNAT1P11488 350 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms