RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 LRRC41Q15345 812 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 UNC13DQ70J99 1090 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 OTOP1Q7RTM1 612 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 LRRC8AQ8IWT6 810 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 TPH2Q8IWU9 490 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 RMDN3Q96TC7 470 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 MXRA8Q9BRK3 442 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 ZNF408Q9H9D4 720 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 DOCK5Q9H7D0 1870 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 IPO5O00410 1097 aaKnown RBP11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 TEX33O43247 280 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 RPA1P27694 616 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 MRPS9P82933 396 aaKnown RBP11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 CDKAL1Q5VV42 579 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 CNNM4Q6P4Q7 775 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 PIGOQ8TEQ8 1089 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 SLC5A5Q92911 643 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 DYDC2Q96IM9 177 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 TRIM47Q96LD4 638 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 UNC45AQ9H3U1 944 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 TAF1DQ9H5J8 278 aaPredicted RBP11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 PAPPA2Q9BXP8 1791 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 RPTORQ8N122 1335 aa11.91□□□□□ -0.5
SMPD4P1-201ENST00000416717 ZBTB39O15060 712 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 PGM5Q15124 567 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 ARHGEF16Q5VV41 709 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 RBM46Q8TBY0 533 aaKnown RBP11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 DNAJC19Q96DA6 116 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 ZMYND15Q9H091 742 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 VPS16Q9H269 839 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 KCNH7Q9NS40 1196 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 BMP2KQ9NSY1 1161 aaPredicted RBP11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 PANK4Q9NVE7 773 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 DNM3Q9UQ16 869 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 TESPA1A2RU30 521 aaPredicted RBP11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 ZNF500O60304 480 aaPredicted RBP11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 FDX1P10109 184 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 SETQ01105 290 aaPredicted RBP11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 TKFCQ3LXA3 575 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 ANKRD40Q6AI12 368 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 ARMCX5Q6P1M9 558 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 VSTM4Q8IW00 320 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 TEX2Q8IWB9 1127 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 TEKT3Q9BXF9 490 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 SRRTQ9BXP5 876 aaKnown RBP11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 LRRC27Q9C0I9 530 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 BHMT2Q9H2M3 363 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 PXMP2Q9NR77 195 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 HOXC10Q9NYD6 342 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 TAB2Q9NYJ8 693 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 ADAMTS5Q9UNA0 930 aa11.9□□□□□ -0.5
SMPD4P1-201ENST00000416717 SCN4AP35499 1836 aa11.9□□□□□ -0.51
SMPD4P1-201ENST00000416717 PVALEFA0A1B0GWK0 134 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 KCNJ18B7U540 433 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 TRAF5O00463 557 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 CYP11B2P19099 503 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 SLC12A3P55017 1021 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 COASYQ13057 564 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 MTMR1Q13613 665 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 KCNJ12Q14500 433 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 KRT31Q15323 416 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 ARSHQ5FYA8 562 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 SH3D19Q5HYK7 790 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 PCNX4Q63HM2 1172 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 MAP1SQ66K74 1059 aaPredicted RBP11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 APTXQ7Z2E3 356 aaKnown RBP11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 TRMT1LQ7Z2T5 733 aaKnown RBP11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 ANKRD13AQ8IZ07 590 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 P2RX5Q93086 422 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 TEX13BQ9BXU2 312 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 IMPACTQ9P2X3 320 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 MYH11P35749 1972 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 PES1O00541 588 aaKnown RBP11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 SLITRK3O94933 977 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 PPP2R5CQ13362 524 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 NR1I3Q14994 352 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 TTI2Q6NXR4 508 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 CSGALNACT2Q8N6G5 542 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 BANK1Q8NDB2 785 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 KIAA1524Q8TCG1 905 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 ZC3H15Q8WU90 426 aaKnown RBP11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 DHTKD1Q96HY7 919 aaPredicted RBP11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 PDCD2LQ9BRP1 358 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 PAGR1Q9BTK6 254 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 FGFBP2Q9BYJ0 223 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 SAMM50Q9Y512 469 aa11.89□□□□□ -0.51
SMPD4P1-201ENST00000416717 SKILP12757 684 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 CCNE1P24864 410 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 GSDMDP57764 484 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 GHRHRQ02643 423 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 NOLC1Q14978 699 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 HERC4Q5GLZ8 1057 aaPredicted RBP11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 TCP11X2Q5H9J9 407 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 ERO1BQ86YB8 467 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 IRF2BP1Q8IU81 584 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 OPTNQ96CV9 577 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 DUSP9Q99956 384 aaKnown RBP11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 HSD17B14Q9BPX1 270 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 POLR3CQ9BUI4 534 aaPredicted RBP11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 SEMA6BQ9H3T3 888 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms