RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 IWS1Q96ST2 819 aa10.93□□□□□ -0.66
LINC01238-201ENST00000416204 C16orf70Q9BSU1 422 aa10.93□□□□□ -0.66
LINC01238-201ENST00000416204 KCNH6Q9H252 994 aa10.93□□□□□ -0.66
LINC01238-201ENST00000416204 CHMP4BQ9H444 224 aaKnown RBP10.93□□□□□ -0.66
LINC01238-201ENST00000416204 TCP11L1Q9NUJ3 509 aa10.93□□□□□ -0.66
LINC01238-201ENST00000416204 SETD4Q9NVD3 440 aa10.93□□□□□ -0.66
LINC01238-201ENST00000416204 PCDHGC5Q9Y5F6 944 aa10.93□□□□□ -0.66
LINC01238-201ENST00000416204 TECTAO75443 2155 aa10.93□□□□□ -0.66
LINC01238-201ENST00000416204 MX1P20591 662 aa10.92□□□□□ -0.66
LINC01238-201ENST00000416204 UBA1P22314 1058 aaKnown RBP10.92□□□□□ -0.66
LINC01238-201ENST00000416204 NDUFV1P49821 464 aa10.92□□□□□ -0.66
LINC01238-201ENST00000416204 PTPN5P54829 565 aa10.92□□□□□ -0.66
LINC01238-201ENST00000416204 VCPP55072 806 aaKnown RBP10.92□□□□□ -0.66
LINC01238-201ENST00000416204 SP4Q02446 784 aa10.92□□□□□ -0.66
LINC01238-201ENST00000416204 SMAD4Q13485 552 aaKnown RBP10.92□□□□□ -0.66
LINC01238-201ENST00000416204 CTC1Q2NKJ3 1217 aa10.92□□□□□ -0.66
LINC01238-201ENST00000416204 MFSD6Q6ZSS7 791 aa10.92□□□□□ -0.66
LINC01238-201ENST00000416204 TRIM67Q6ZTA4 783 aa10.92□□□□□ -0.66
LINC01238-201ENST00000416204 ADGRD2Q7Z7M1 963 aa10.92□□□□□ -0.66
LINC01238-201ENST00000416204 RNPEPQ9H4A4 650 aa10.92□□□□□ -0.66
LINC01238-201ENST00000416204 CD207Q9UJ71 328 aa10.92□□□□□ -0.66
LINC01238-201ENST00000416204 PNMA2Q9UL42 364 aa10.92□□□□□ -0.66
LINC01238-201ENST00000416204 ATG2AQ2TAZ0 1938 aa10.92□□□□□ -0.66
LINC01238-201ENST00000416204 VPS13AQ96RL7 3174 aa10.91□□□□□ -0.66
LINC01238-201ENST00000416204 H3BRB1 525 aa10.91□□□□□ -0.66
LINC01238-201ENST00000416204 OPLAHO14841 1288 aa10.91□□□□□ -0.66
LINC01238-201ENST00000416204 GFRA3O60609 400 aa10.91□□□□□ -0.66
LINC01238-201ENST00000416204 PPFIA4O75335 1185 aa10.91□□□□□ -0.66
LINC01238-201ENST00000416204 LGALS2P05162 132 aa10.91□□□□□ -0.66
LINC01238-201ENST00000416204 LINC00271P0C7V0 271 aa10.91□□□□□ -0.66
LINC01238-201ENST00000416204 HSPD1P10809 573 aaKnown RBP10.91□□□□□ -0.66
LINC01238-201ENST00000416204 GHRP10912 638 aa10.91□□□□□ -0.66
LINC01238-201ENST00000416204 DNAJB1P25685 340 aa10.91□□□□□ -0.66
LINC01238-201ENST00000416204 BMPR1AP36894 532 aa10.91□□□□□ -0.66
LINC01238-201ENST00000416204 NMIQ13287 307 aaPredicted RBP10.91□□□□□ -0.66
LINC01238-201ENST00000416204 ALX1Q15699 326 aa10.91□□□□□ -0.66
LINC01238-201ENST00000416204 GPATCH4Q5T3I0 446 aaKnown RBP10.91□□□□□ -0.66
LINC01238-201ENST00000416204 UTP14CQ5TAP6 766 aaKnown RBP10.91□□□□□ -0.66
LINC01238-201ENST00000416204 RBM23Q86U06 439 aaKnown RBP10.91□□□□□ -0.66
LINC01238-201ENST00000416204 MCF2L2Q86YR7 1114 aa10.91□□□□□ -0.66
LINC01238-201ENST00000416204 SUGP1Q8IWZ8 645 aaKnown RBP10.91□□□□□ -0.66
LINC01238-201ENST00000416204 PNMA1Q8ND90 353 aa10.91□□□□□ -0.66
LINC01238-201ENST00000416204 POP1Q99575 1024 aaKnown RBP10.91□□□□□ -0.66
LINC01238-201ENST00000416204 TUT1Q9H6E5 874 aaKnown RBP10.91□□□□□ -0.66
LINC01238-201ENST00000416204 JMJD4Q9H9V9 463 aa10.91□□□□□ -0.66
LINC01238-201ENST00000416204 MLXIPQ9HAP2 919 aa10.91□□□□□ -0.66
LINC01238-201ENST00000416204 RCAN3Q9UKA8 241 aa10.91□□□□□ -0.66
LINC01238-201ENST00000416204 MRPL11Q9Y3B7 192 aaKnown RBP10.91□□□□□ -0.66
LINC01238-201ENST00000416204 NLRC5Q86WI3 1866 aa10.91□□□□□ -0.66
LINC01238-201ENST00000416204 ADGRA3Q8IWK6 1321 aa10.9□□□□□ -0.66
LINC01238-201ENST00000416204 KIAA1217Q5T5P2 1943 aa10.9□□□□□ -0.66
LINC01238-201ENST00000416204 ST18O60284 1047 aa10.9□□□□□ -0.66
LINC01238-201ENST00000416204 PPP1R11O60927 126 aaPredicted RBP10.9□□□□□ -0.66
LINC01238-201ENST00000416204 HOXD8P13378 290 aaPredicted RBP10.9□□□□□ -0.66
LINC01238-201ENST00000416204 SP100P23497 879 aaPredicted RBP10.9□□□□□ -0.66
LINC01238-201ENST00000416204 ARHGAP4P98171 946 aa10.9□□□□□ -0.66
LINC01238-201ENST00000416204 RBM10P98175 930 aaKnown RBP10.9□□□□□ -0.66
LINC01238-201ENST00000416204 CAMK1Q14012 370 aa10.9□□□□□ -0.66
LINC01238-201ENST00000416204 BTG3Q14201 252 aaPredicted RBP10.9□□□□□ -0.66
LINC01238-201ENST00000416204 PAN2Q504Q3 1202 aaKnown RBP10.9□□□□□ -0.66
LINC01238-201ENST00000416204 RUFY4Q6ZNE9 571 aa10.9□□□□□ -0.66
LINC01238-201ENST00000416204 FCHSD1Q86WN1 690 aa10.9□□□□□ -0.66
LINC01238-201ENST00000416204 ZBTB10Q96DT7 871 aa10.9□□□□□ -0.66
LINC01238-201ENST00000416204 RPGRIP1Q96KN7 1286 aa10.9□□□□□ -0.66
LINC01238-201ENST00000416204 PDCD2LQ9BRP1 358 aa10.9□□□□□ -0.66
LINC01238-201ENST00000416204 C11orf84Q9BUA3 381 aaPredicted RBP10.9□□□□□ -0.66
LINC01238-201ENST00000416204 KAT14Q9H8E8 782 aa10.9□□□□□ -0.66
LINC01238-201ENST00000416204 BARX2Q9UMQ3 279 aaPredicted RBP10.9□□□□□ -0.66
LINC01238-201ENST00000416204 PCDHB15Q9Y5E8 787 aa10.9□□□□□ -0.66
LINC01238-201ENST00000416204 MYH7BA7E2Y1 1941 aa10.9□□□□□ -0.67
LINC01238-201ENST00000416204 CCDC171Q6TFL3 1326 aa10.89□□□□□ -0.67
LINC01238-201ENST00000416204 TRIM6-TRIM34B2RNG4 842 aa10.89□□□□□ -0.67
LINC01238-201ENST00000416204 NOP56O00567 594 aaKnown RBP10.89□□□□□ -0.67
LINC01238-201ENST00000416204 PPFIA3O75145 1194 aa10.89□□□□□ -0.67
LINC01238-201ENST00000416204 KDM4AO75164 1064 aa10.89□□□□□ -0.67
LINC01238-201ENST00000416204 CHRNA1P02708 482 aa10.89□□□□□ -0.67
LINC01238-201ENST00000416204 NRIP1P48552 1158 aa10.89□□□□□ -0.67
LINC01238-201ENST00000416204 GATMP50440 423 aa10.89□□□□□ -0.67
LINC01238-201ENST00000416204 HSD17B4P51659 736 aa10.89□□□□□ -0.67
LINC01238-201ENST00000416204 RRP1P56182 461 aaKnown RBP10.89□□□□□ -0.67
LINC01238-201ENST00000416204 ZXDAP98168 799 aa10.89□□□□□ -0.67
LINC01238-201ENST00000416204 ADAM15Q13444 863 aa10.89□□□□□ -0.67
LINC01238-201ENST00000416204 PGM5Q15124 567 aa10.89□□□□□ -0.67
LINC01238-201ENST00000416204 MCMDC2Q4G0Z9 681 aa10.89□□□□□ -0.67
LINC01238-201ENST00000416204 CYFIP1Q7L576 1253 aa10.89□□□□□ -0.67
LINC01238-201ENST00000416204 STAG2Q8N3U4 1231 aa10.89□□□□□ -0.67
LINC01238-201ENST00000416204 ATOH1Q92858 354 aaPredicted RBP10.89□□□□□ -0.67
LINC01238-201ENST00000416204 TTC14Q96N46 770 aa10.89□□□□□ -0.67
LINC01238-201ENST00000416204 HELLSQ9NRZ9 838 aa10.89□□□□□ -0.67
LINC01238-201ENST00000416204 CLEC1BQ9P126 229 aa10.89□□□□□ -0.67
LINC01238-201ENST00000416204 MRPL42Q9Y6G3 142 aaKnown RBP10.89□□□□□ -0.67
LINC01238-201ENST00000416204 WDR87Q6ZQQ6 2873 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 B4E1Z4 1266 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 C5orf67F2Z3F1 127 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 H0Y858 1186 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 PER2O15055 1255 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 NCK2O43639 380 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 PDGFBP01127 241 aaPredicted RBP10.88□□□□□ -0.67
LINC01238-201ENST00000416204 MMP1P03956 469 aa10.88□□□□□ -0.67
LINC01238-201ENST00000416204 PARP1P09874 1014 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms