RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 LRRC37A2A6NM11 1700 aa16.38■□□□□ 0.21
SGCE-202ENST00000415788 TBX3O15119 743 aa16.37■□□□□ 0.21
SGCE-202ENST00000415788 NKRFO15226 690 aaKnown RBP eCLIP16.37■□□□□ 0.21
SGCE-202ENST00000415788 NEMFO60524 1076 aa16.37■□□□□ 0.21
SGCE-202ENST00000415788 BMP15O95972 392 aa16.37■□□□□ 0.21
SGCE-202ENST00000415788 AKR1A1P14550 325 aa16.37■□□□□ 0.21
SGCE-202ENST00000415788 TRIM32Q13049 653 aa16.37■□□□□ 0.21
SGCE-202ENST00000415788 CCDC144BQ3MJ40 725 aa16.37■□□□□ 0.21
SGCE-202ENST00000415788 PRAMEF19Q5SWL8 479 aa16.37■□□□□ 0.21
SGCE-202ENST00000415788 GIMAP8Q8ND71 665 aaPredicted RBP16.37■□□□□ 0.21
SGCE-202ENST00000415788 SH3TC2Q8TF17 1288 aa16.37■□□□□ 0.21
SGCE-202ENST00000415788 LENG9Q96B70 501 aa16.37■□□□□ 0.21
SGCE-202ENST00000415788 ZNF396Q96N95 335 aaPredicted RBP16.37■□□□□ 0.21
SGCE-202ENST00000415788 SENP7Q9BQF6 1050 aa16.37■□□□□ 0.21
SGCE-202ENST00000415788 HMX1Q9NP08 348 aaPredicted RBP16.37■□□□□ 0.21
SGCE-202ENST00000415788 USP25Q9UHP3 1055 aa16.37■□□□□ 0.21
SGCE-202ENST00000415788 SEPT4O43236 478 aa16.37■□□□□ 0.21
SGCE-202ENST00000415788 MSCO60682 206 aa16.37■□□□□ 0.21
SGCE-202ENST00000415788 MCM7P33993 719 aa16.37■□□□□ 0.21
SGCE-202ENST00000415788 DMTNQ08495 405 aa16.37■□□□□ 0.21
SGCE-202ENST00000415788 ARMC5Q96C12 935 aa16.37■□□□□ 0.21
SGCE-202ENST00000415788 PDGFCQ9NRA1 345 aa16.37■□□□□ 0.21
SGCE-202ENST00000415788 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.37■□□□□ 0.21
SGCE-202ENST00000415788 CEP131Q9UPN4 1083 aa16.37■□□□□ 0.21
SGCE-202ENST00000415788 LAD1O00515 517 aa16.36■□□□□ 0.21
SGCE-202ENST00000415788 SLC37A4O43826 429 aa16.36■□□□□ 0.21
SGCE-202ENST00000415788 TXNP10599 105 aaKnown RBP16.36■□□□□ 0.21
SGCE-202ENST00000415788 ADCYAP1R1P41586 468 aa16.36■□□□□ 0.21
SGCE-202ENST00000415788 TNFAIP2Q03169 654 aa16.36■□□□□ 0.21
SGCE-202ENST00000415788 NEDD9Q14511 834 aa16.36■□□□□ 0.21
SGCE-202ENST00000415788 CCDC62Q6P9F0 684 aa16.36■□□□□ 0.21
SGCE-202ENST00000415788 SLFN12Q8IYM2 578 aa16.36■□□□□ 0.21
SGCE-202ENST00000415788 TRPV1Q8NER1 839 aa16.36■□□□□ 0.21
SGCE-202ENST00000415788 FAM20AQ96MK3 541 aa16.36■□□□□ 0.21
SGCE-202ENST00000415788 AGO4Q9HCK5 861 aaKnown RBP16.36■□□□□ 0.21
SGCE-202ENST00000415788 KCNMB3Q9NPA1 279 aa16.36■□□□□ 0.21
SGCE-202ENST00000415788 DDX41Q9UJV9 622 aaKnown RBP16.36■□□□□ 0.21
SGCE-202ENST00000415788 PCDHB6Q9Y5E3 794 aa16.36■□□□□ 0.21
SGCE-202ENST00000415788 IPO5O00410 1097 aaKnown RBP16.35■□□□□ 0.21
SGCE-202ENST00000415788 WNT7AO00755 349 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 ARP10275 920 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 CNGA1P29973 690 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 SEMA3FQ13275 785 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 ZNF174Q15697 407 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 DUSP28Q4G0W2 176 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 RIT2Q99578 217 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 ZNF577Q9BSK1 485 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 GTPBP4Q9BZE4 634 aaKnown RBP16.35■□□□□ 0.21
SGCE-202ENST00000415788 TBC1D22BQ9NU19 505 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 Q9Y3F1 56 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 MYH7BA7E2Y1 1941 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 NFASCO94856 1347 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 GOLGA6L6A8MZA4 724 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 UBA1P22314 1058 aaKnown RBP16.35■□□□□ 0.21
SGCE-202ENST00000415788 CALCRLQ16602 461 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 FAM173BQ6P4H8 233 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 POTEDQ86YR6 584 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 ETNPPLQ8TBG4 499 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 SDF4Q9BRK5 362 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 MCOLN1Q9GZU1 580 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 POLR3EQ9NVU0 708 aa16.35■□□□□ 0.21
SGCE-202ENST00000415788 MSH4O15457 936 aa16.34■□□□□ 0.21
SGCE-202ENST00000415788 MARCH6O60337 910 aa16.34■□□□□ 0.21
SGCE-202ENST00000415788 KCNA2P16389 499 aa16.34■□□□□ 0.21
SGCE-202ENST00000415788 SMPD1P17405 629 aa16.34■□□□□ 0.21
SGCE-202ENST00000415788 CCND3P30281 292 aaPredicted RBP16.34■□□□□ 0.21
SGCE-202ENST00000415788 ANO1Q5XXA6 986 aa16.34■□□□□ 0.21
SGCE-202ENST00000415788 SLC5A5Q92911 643 aa16.34■□□□□ 0.21
SGCE-202ENST00000415788 ZNF333Q96JL9 665 aa16.34■□□□□ 0.21
SGCE-202ENST00000415788 GDPD2Q9HCC8 539 aa16.34■□□□□ 0.21
SGCE-202ENST00000415788 DDX20Q9UHI6 824 aaKnown RBP16.34■□□□□ 0.21
SGCE-202ENST00000415788 CFAP45Q9UL16 551 aa16.34■□□□□ 0.21
SGCE-202ENST00000415788 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.33■□□□□ 0.21
SGCE-202ENST00000415788 DUSP11O75319 330 aaKnown RBP16.33■□□□□ 0.21
SGCE-202ENST00000415788 ARIH2O95376 493 aa16.33■□□□□ 0.21
SGCE-202ENST00000415788 GH1P01241 217 aa16.33■□□□□ 0.21
SGCE-202ENST00000415788 RARBP10826 455 aa16.33■□□□□ 0.21
SGCE-202ENST00000415788 SF3A1Q15459 793 aaKnown RBP16.33■□□□□ 0.21
SGCE-202ENST00000415788 LY6KQ17RY6 165 aa16.33■□□□□ 0.21
SGCE-202ENST00000415788 METTL7BQ6UX53 244 aa16.33■□□□□ 0.21
SGCE-202ENST00000415788 ZNF710Q8N1W2 664 aa16.33■□□□□ 0.21
SGCE-202ENST00000415788 EMID1Q96A84 441 aaPredicted RBP16.33■□□□□ 0.21
SGCE-202ENST00000415788 MTMR9Q96QG7 549 aa16.33■□□□□ 0.21
SGCE-202ENST00000415788 FUCA2Q9BTY2 467 aa16.33■□□□□ 0.21
SGCE-202ENST00000415788 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.33■□□□□ 0.21
SGCE-202ENST00000415788 TCEAL9Q9UHQ7 104 aa16.33■□□□□ 0.21
SGCE-202ENST00000415788 GNEQ9Y223 722 aaKnown RBP16.33■□□□□ 0.21
SGCE-202ENST00000415788 MCM3APO60318 1980 aa16.33■□□□□ 0.2
SGCE-202ENST00000415788 OR52Z1P0C646 297 aa16.33■□□□□ 0.2
SGCE-202ENST00000415788 PRPHP41219 470 aa16.33■□□□□ 0.2
SGCE-202ENST00000415788 ATP2C1P98194 919 aaPredicted RBP16.33■□□□□ 0.2
SGCE-202ENST00000415788 PTGDRQ13258 359 aa16.33■□□□□ 0.2
SGCE-202ENST00000415788 LAMC2Q13753 1193 aa16.33■□□□□ 0.2
SGCE-202ENST00000415788 CELF3Q5SZQ8 465 aaKnown RBP16.33■□□□□ 0.2
SGCE-202ENST00000415788 ARL6IP4Q66PJ3 421 aaKnown RBP16.33■□□□□ 0.2
SGCE-202ENST00000415788 USP28Q96RU2 1077 aa16.33■□□□□ 0.2
SGCE-202ENST00000415788 PAK6Q9NQU5 681 aaPredicted RBP16.33■□□□□ 0.2
SGCE-202ENST00000415788 MORC2Q9Y6X9 1032 aaPredicted RBP16.33■□□□□ 0.2
SGCE-202ENST00000415788 GAS7O60861 476 aa16.32■□□□□ 0.2
SGCE-202ENST00000415788 ATP9AO75110 1047 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms