RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 BIRC3Q13489 604 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 TRIM68Q6AZZ1 485 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 RINLQ6ZS11 566 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 TSHZ1Q6ZSZ6 1077 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 PNMA1Q8ND90 353 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 AGAP11Q8TF27 550 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 MASTLQ96GX5 879 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 L3MBTL3Q96JM7 780 aaPredicted RBP8.56□□□□□ -1.04
SIK3-203ENST00000415541 PCMTD1Q96MG8 357 aaPredicted RBP8.56□□□□□ -1.04
SIK3-203ENST00000415541 UIMC1Q96RL1 719 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 MXD3Q9BW11 206 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 BRIP1Q9BX63 1249 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 NSRP1Q9H0G5 558 aaKnown RBP8.56□□□□□ -1.04
SIK3-203ENST00000415541 DNAAF2Q9NVR5 837 aaKnown RBP8.56□□□□□ -1.04
SIK3-203ENST00000415541 ROBO1Q9Y6N7 1651 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 MRC1P22897 1456 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 USP17L3A6NCW0 530 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 USP17L4A6NCW7 530 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 SH2B2O14492 632 aaPredicted RBP8.56□□□□□ -1.04
SIK3-203ENST00000415541 TRAPPC3O43617 180 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 USO1O60763 962 aaKnown RBP8.56□□□□□ -1.04
SIK3-203ENST00000415541 TACC1O75410 805 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 NDUFA10O95299 355 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 FGFR2P21802 821 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 TNFRSF8P28908 595 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 MCM7P33993 719 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 ZNF76P36508 570 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 PLCD1P51178 756 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 SPATA1Q5VX52 437 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 NUGGCQ68CJ6 796 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 USP17L1Q7RTZ2 530 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 ELOA2Q8IYF1 753 aaPredicted RBP8.56□□□□□ -1.04
SIK3-203ENST00000415541 WHAMMQ8TF30 809 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 FGD4Q96M96 766 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 TRIM7Q9C029 511 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 TAF1DQ9H5J8 278 aaPredicted RBP8.56□□□□□ -1.04
SIK3-203ENST00000415541 KCNH3Q9ULD8 1083 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 C5P01031 1676 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 CLRN2A0PK11 232 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 PPP6R2O75170 966 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 PARP1P09874 1014 aaKnown RBP8.55□□□□□ -1.04
SIK3-203ENST00000415541 KRT9P35527 623 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 TMED1Q13445 227 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 ZNF365Q70YC5 407 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 SYCP3Q8IZU3 236 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 LRRC47Q8N1G4 583 aaKnown RBP8.55□□□□□ -1.04
SIK3-203ENST00000415541 CCT6BQ92526 530 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 OPTNQ96CV9 577 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 TSPAN18Q96SJ8 248 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 SENP2Q9HC62 589 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 CEP104O60308 925 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 TCP1P17987 556 aaKnown RBP8.55□□□□□ -1.04
SIK3-203ENST00000415541 ZNF268Q14587 947 aaPredicted RBP8.55□□□□□ -1.04
SIK3-203ENST00000415541 SLC10A5Q5PT55 438 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 ANKRD20A2Q5SQ80 823 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 ANKRD20A1Q5TYW2 823 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 ANKRD20A3Q5VUR7 823 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 MB21D2Q8IYB1 491 aaPredicted RBP8.55□□□□□ -1.04
SIK3-203ENST00000415541 ARHGAP18Q8N392 663 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 TSEN2Q8NCE0 465 aaKnown RBP8.55□□□□□ -1.04
SIK3-203ENST00000415541 TBC1D16Q8TBP0 767 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 NSUN4Q96CB9 384 aaKnown RBP8.55□□□□□ -1.04
SIK3-203ENST00000415541 PLIN2Q99541 437 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 UBA5Q9GZZ9 404 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 MAF1Q9H063 256 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 DCP1AQ9NPI6 582 aaPredicted RBP8.55□□□□□ -1.04
SIK3-203ENST00000415541 SAMSN1Q9NSI8 373 aaKnown RBP8.55□□□□□ -1.04
SIK3-203ENST00000415541 ABHD10Q9NUJ1 306 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 WDR35Q9P2L0 1181 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 A0A0U1RQJ8 604 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 C5orf60A6NFR6 353 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 TCP10L2B9ZVM9 353 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 KRT2P35908 639 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 KIF5AQ12840 1032 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 PPP1R15BQ5SWA1 713 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 LRIG3Q6UXM1 1119 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 PIK3AP1Q6ZUJ8 805 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 TRMT44Q8IYL2 757 aaKnown RBP8.55□□□□□ -1.04
SIK3-203ENST00000415541 TRAPPC9Q96Q05 1148 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 LRRC1Q9BTT6 524 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 ZWILCHQ9H900 591 aa8.55□□□□□ -1.04
SIK3-203ENST00000415541 CNOT10Q9H9A5 744 aaKnown RBP8.55□□□□□ -1.04
SIK3-203ENST00000415541 EPB41L4AQ9HCS5 686 aaPredicted RBP8.55□□□□□ -1.04
SIK3-203ENST00000415541 PFDN1O60925 122 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 FECHP22830 423 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 CDC25CP30307 473 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 UBA7P41226 1012 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 KLC1Q07866 573 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 POSTNQ15063 836 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.54□□□□□ -1.04
SIK3-203ENST00000415541 FBXO33Q7Z6M2 555 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 SESTD1Q86VW0 696 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 GPKOWQ92917 476 aaPredicted RBP eCLIP8.54□□□□□ -1.04
SIK3-203ENST00000415541 LRRC45Q96CN5 670 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 LZTS2Q9BRK4 669 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 TMEM165Q9HC07 324 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 SCOCQ9UIL1 159 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 MAN1B1Q9UKM7 699 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 DPPA5A6NC42 116 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 FAM196BA6NMK8 535 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms