RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 ATG7O95352 703 aa7.3□□□□□ -1.24
LMBR1-204ENST00000415428 PROS1P07225 676 aa7.3□□□□□ -1.24
LMBR1-204ENST00000415428 KCNA5P22460 613 aa7.3□□□□□ -1.24
LMBR1-204ENST00000415428 SARSP49591 514 aaKnown RBP7.3□□□□□ -1.24
LMBR1-204ENST00000415428 CCL23P55773 120 aa7.3□□□□□ -1.24
LMBR1-204ENST00000415428 PSMC6P62333 389 aa7.3□□□□□ -1.24
LMBR1-204ENST00000415428 PPP2R5BQ15173 497 aa7.3□□□□□ -1.24
LMBR1-204ENST00000415428 CEP85Q6P2H3 762 aa7.3□□□□□ -1.24
LMBR1-204ENST00000415428 PDXDC1Q6P996 788 aa7.3□□□□□ -1.24
LMBR1-204ENST00000415428 ADSSL1Q8N142 457 aa7.3□□□□□ -1.24
LMBR1-204ENST00000415428 LOXL4Q96JB6 756 aa7.3□□□□□ -1.24
LMBR1-204ENST00000415428 MTA3Q9BTC8 594 aa7.3□□□□□ -1.24
LMBR1-204ENST00000415428 PDGFCQ9NRA1 345 aa7.3□□□□□ -1.24
LMBR1-204ENST00000415428 RNF19AQ9NV58 838 aa7.3□□□□□ -1.24
LMBR1-204ENST00000415428 DKK4Q9UBT3 224 aa7.3□□□□□ -1.24
LMBR1-204ENST00000415428 SAP30BPQ9UHR5 308 aaKnown RBP7.3□□□□□ -1.24
LMBR1-204ENST00000415428 ARIH2O95376 493 aa7.3□□□□□ -1.24
LMBR1-204ENST00000415428 CASTP20810 708 aaKnown RBP7.3□□□□□ -1.24
LMBR1-204ENST00000415428 COL5A1P20908 1838 aaPredicted RBP7.3□□□□□ -1.24
LMBR1-204ENST00000415428 TPRNQ4KMQ1 711 aa7.3□□□□□ -1.24
LMBR1-204ENST00000415428 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.3□□□□□ -1.24
LMBR1-204ENST00000415428 EPB41L4AQ9HCS5 686 aaPredicted RBP7.3□□□□□ -1.24
LMBR1-204ENST00000415428 NFASCO94856 1347 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 ENPP3O14638 875 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 IPO8O15397 1037 aaKnown RBP7.29□□□□□ -1.24
LMBR1-204ENST00000415428 EOMESO95936 686 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 DLX2Q07687 328 aaPredicted RBP7.29□□□□□ -1.24
LMBR1-204ENST00000415428 ACAP1Q15027 740 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 MYSM1Q5VVJ2 828 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 FIBCD1Q8N539 461 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 NETO1Q8TDF5 533 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 DDX11Q96FC9 970 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 CHRDQ9H2X0 955 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 NOB1Q9ULX3 412 aaKnown RBP7.29□□□□□ -1.24
LMBR1-204ENST00000415428 CUL9Q8IWT3 2517 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 TK2O00142 265 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 ITGB1P05556 798 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 ODR4Q5SWX8 454 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 KIAA0319Q5VV43 1072 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 SPRED2Q7Z698 418 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 MBOAT7Q96N66 472 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 SPATA31C2B4DYI2 1134 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 TREHO43280 583 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 GNAT1P11488 350 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 IRX5P78411 483 aaPredicted RBP7.29□□□□□ -1.24
LMBR1-204ENST00000415428 PDXDC2PQ6P474 469 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 DGLUCYQ7Z3D6 616 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 GIMAP8Q8ND71 665 aaPredicted RBP7.29□□□□□ -1.24
LMBR1-204ENST00000415428 ATOH1Q92858 354 aaPredicted RBP7.29□□□□□ -1.24
LMBR1-204ENST00000415428 INPP4AQ96PE3 977 aaPredicted RBP7.29□□□□□ -1.24
LMBR1-204ENST00000415428 NEK1Q96PY6 1258 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.29□□□□□ -1.242e-6■■■□□ 14.7
LMBR1-204ENST00000415428 ERVK-5Q9HDB9 667 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 IL17RBQ9NRM6 502 aa7.29□□□□□ -1.24
LMBR1-204ENST00000415428 IGSF9BQ9UPX0 1349 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 PATL2C9JE40 543 aaKnown RBP7.28□□□□□ -1.24
LMBR1-204ENST00000415428 GRM6O15303 877 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 CYP2C9P11712 490 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 CNR2P34972 360 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 TRAF1Q13077 416 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 ST3GAL2Q16842 350 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 FBXO47Q5MNV8 452 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 MCF2L2Q86YR7 1114 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 ANKRD35Q8N283 1001 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 APPBP2Q92624 585 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 MAP4K1Q92918 833 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 CDCA7LQ96GN5 454 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 MCM9Q9NXL9 1143 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 OPLAHO14841 1288 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 DYNC1LI2O43237 492 aaPredicted RBP7.28□□□□□ -1.24
LMBR1-204ENST00000415428 POLR3DP05423 398 aaPredicted RBP7.28□□□□□ -1.24
LMBR1-204ENST00000415428 PRKCQQ04759 706 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 ZC3H14Q6PJT7 736 aaKnown RBP7.28□□□□□ -1.24
LMBR1-204ENST00000415428 PCDH15Q96QU1 1955 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 RSPH10B2B2RC85 870 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 RSPH10BP0C881 870 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 CYP2D6P10635 497 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 TRIM27P14373 513 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 EVX2Q03828 476 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 GPATCH4Q5T3I0 446 aaKnown RBP7.28□□□□□ -1.24
LMBR1-204ENST00000415428 VSIG10LQ86VR7 867 aa7.28□□□□□ -1.24
LMBR1-204ENST00000415428 FBXO16Q8IX29 292 aaPredicted RBP7.28□□□□□ -1.24
LMBR1-204ENST00000415428 MRPS27Q92552 414 aaKnown RBP7.28□□□□□ -1.24
LMBR1-204ENST00000415428 TLR7Q9NYK1 1049 aaKnown RBP7.28□□□□□ -1.24
LMBR1-204ENST00000415428 TTC41PQ6P2S7 1318 aa7.27□□□□□ -1.25
LMBR1-204ENST00000415428 SP9P0CG40 484 aa7.27□□□□□ -1.25
LMBR1-204ENST00000415428 LPIN1Q14693 890 aa7.27□□□□□ -1.25
LMBR1-204ENST00000415428 SLFN13Q68D06 897 aa7.27□□□□□ -1.25
LMBR1-204ENST00000415428 AMOTL1Q8IY63 956 aa7.27□□□□□ -1.25
LMBR1-204ENST00000415428 CEP95Q96GE4 821 aa7.27□□□□□ -1.25
LMBR1-204ENST00000415428 RXFP1Q9HBX9 757 aa7.27□□□□□ -1.25
LMBR1-204ENST00000415428 RAVER2Q9HCJ3 691 aaKnown RBP7.27□□□□□ -1.25
LMBR1-204ENST00000415428 PCDHA2Q9Y5H9 948 aa7.27□□□□□ -1.25
LMBR1-204ENST00000415428 CHRNA1P02708 482 aa7.27□□□□□ -1.25
LMBR1-204ENST00000415428 GLULP15104 373 aa7.27□□□□□ -1.25
LMBR1-204ENST00000415428 HOXA9P31269 272 aa7.27□□□□□ -1.25
LMBR1-204ENST00000415428 ZNF543Q08ER8 600 aa7.27□□□□□ -1.25
LMBR1-204ENST00000415428 MARCH8Q5T0T0 291 aa7.27□□□□□ -1.25
LMBR1-204ENST00000415428 SYDE2Q5VT97 1194 aa7.27□□□□□ -1.25
LMBR1-204ENST00000415428 ANO1Q5XXA6 986 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms