RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 BTG3Q14201 252 aaPredicted RBP18.58■□□□□ 0.56
CPNE1-208ENST00000414711 BTNL9Q6UXG8 535 aa18.58■□□□□ 0.56
CPNE1-208ENST00000414711 RBM23Q86U06 439 aaKnown RBP18.58■□□□□ 0.56
CPNE1-208ENST00000414711 KREMEN2Q8NCW0 462 aa18.58■□□□□ 0.56
CPNE1-208ENST00000414711 DCAF4Q8WV16 495 aa18.58■□□□□ 0.56
CPNE1-208ENST00000414711 P2RX5Q93086 422 aa18.58■□□□□ 0.56
CPNE1-208ENST00000414711 PNMA2Q9UL42 364 aa18.58■□□□□ 0.56
CPNE1-208ENST00000414711 MTMR3Q13615 1198 aa18.57■□□□□ 0.56
CPNE1-208ENST00000414711 ASTLQ6HA08 431 aaPredicted RBP18.57■□□□□ 0.56
CPNE1-208ENST00000414711 UBALD2Q8IYN6 164 aa18.57■□□□□ 0.56
CPNE1-208ENST00000414711 ATP6V0A1Q93050 837 aa18.57■□□□□ 0.56
CPNE1-208ENST00000414711 C17orf102A2RUQ5 167 aa18.56■□□□□ 0.56
CPNE1-208ENST00000414711 NMT2O60551 498 aa18.56■□□□□ 0.56
CPNE1-208ENST00000414711 APPP05067 770 aa18.56■□□□□ 0.56
CPNE1-208ENST00000414711 ITGB1P05556 798 aa18.56■□□□□ 0.56
CPNE1-208ENST00000414711 HOXD8P13378 290 aaPredicted RBP18.56■□□□□ 0.56
CPNE1-208ENST00000414711 SP100P23497 879 aaPredicted RBP18.56■□□□□ 0.56
CPNE1-208ENST00000414711 LAMC2Q13753 1193 aa18.56■□□□□ 0.56
CPNE1-208ENST00000414711 PUM1Q14671 1186 aaKnown RBP eCLIP18.56■□□□□ 0.56
CPNE1-208ENST00000414711 DDX41Q9UJV9 622 aaKnown RBP18.56■□□□□ 0.56
CPNE1-208ENST00000414711 CEP250Q9BV73 2442 aa18.55■□□□□ 0.56
CPNE1-208ENST00000414711 KIAA1217Q5T5P2 1943 aa18.55■□□□□ 0.56
CPNE1-208ENST00000414711 GPAA1O43292 621 aa18.55■□□□□ 0.56
CPNE1-208ENST00000414711 SLC3A2P08195 630 aaKnown RBP18.55■□□□□ 0.56
CPNE1-208ENST00000414711 GNAT2P19087 354 aa18.55■□□□□ 0.56
CPNE1-208ENST00000414711 RBM10P98175 930 aaKnown RBP18.55■□□□□ 0.56
CPNE1-208ENST00000414711 FTSJ3Q8IY81 847 aaKnown RBP18.55■□□□□ 0.56
CPNE1-208ENST00000414711 SPPL3Q8TCT6 385 aa18.55■□□□□ 0.56
CPNE1-208ENST00000414711 OSBP2Q969R2 916 aa18.55■□□□□ 0.56
CPNE1-208ENST00000414711 ZNF689Q96CS4 500 aaPredicted RBP18.55■□□□□ 0.56
CPNE1-208ENST00000414711 IL17RBQ9NRM6 502 aa18.55■□□□□ 0.56
CPNE1-208ENST00000414711 SORCS3Q9UPU3 1222 aa18.55■□□□□ 0.56
CPNE1-208ENST00000414711 PCDHGC5Q9Y5F6 944 aa18.55■□□□□ 0.56
CPNE1-208ENST00000414711 FRMPD2Q68DX3 1309 aaPredicted RBP18.54■□□□□ 0.56
CPNE1-208ENST00000414711 WDR19Q8NEZ3 1342 aa18.54■□□□□ 0.56
CPNE1-208ENST00000414711 TSPY2A6NKD2 308 aa18.54■□□□□ 0.56
CPNE1-208ENST00000414711 BRD1O95696 1058 aa18.54■□□□□ 0.56
CPNE1-208ENST00000414711 HOXC8P31273 242 aa18.54■□□□□ 0.56
CPNE1-208ENST00000414711 STXBP2Q15833 593 aa18.54■□□□□ 0.56
CPNE1-208ENST00000414711 NAALADL2Q58DX5 795 aa18.54■□□□□ 0.56
CPNE1-208ENST00000414711 KIAA2013Q8IYS2 634 aa18.54■□□□□ 0.56
CPNE1-208ENST00000414711 POF1BQ8WVV4 589 aa18.54■□□□□ 0.56
CPNE1-208ENST00000414711 APPBP2Q92624 585 aa18.54■□□□□ 0.56
CPNE1-208ENST00000414711 TLE6Q9H808 572 aa18.54■□□□□ 0.56
CPNE1-208ENST00000414711 MRVI1Q9Y6F6 885 aa18.54■□□□□ 0.56
CPNE1-208ENST00000414711 MRPL42Q9Y6G3 142 aaKnown RBP18.54■□□□□ 0.56
CPNE1-208ENST00000414711 TREHO43280 583 aa18.53■□□□□ 0.56
CPNE1-208ENST00000414711 KLHL23Q8NBE8 558 aa18.53■□□□□ 0.56
CPNE1-208ENST00000414711 VN1R2Q8NFZ6 395 aa18.53■□□□□ 0.56
CPNE1-208ENST00000414711 NSUN6Q8TEA1 469 aaKnown RBP18.53■□□□□ 0.56
CPNE1-208ENST00000414711 ATP8B4Q8TF62 1192 aa18.53■□□□□ 0.56
CPNE1-208ENST00000414711 NEK1Q96PY6 1258 aa18.53■□□□□ 0.56
CPNE1-208ENST00000414711 MFSD1Q9H3U5 465 aa18.53■□□□□ 0.56
CPNE1-208ENST00000414711 GPCPD1Q9NPB8 672 aa18.53■□□□□ 0.56
CPNE1-208ENST00000414711 BAHCC1Q9P281 2608 aa18.53■□□□□ 0.56
CPNE1-208ENST00000414711 KIAA1671Q9BY89 1806 aa18.53■□□□□ 0.56
CPNE1-208ENST00000414711 PPFIA4O75335 1185 aa18.52■□□□□ 0.56
CPNE1-208ENST00000414711 PPARAQ07869 468 aa18.52■□□□□ 0.56
CPNE1-208ENST00000414711 IFNL3Q8IZI9 196 aa18.52■□□□□ 0.56
CPNE1-208ENST00000414711 KCNG4Q8TDN1 519 aa18.52■□□□□ 0.56
CPNE1-208ENST00000414711 FSD2A1L4K1 749 aa18.51■□□□□ 0.55
CPNE1-208ENST00000414711 DGKIO75912 1065 aa18.51■□□□□ 0.55
CPNE1-208ENST00000414711 SMIM10L2AP0DMW4 78 aa18.51■□□□□ 0.55
CPNE1-208ENST00000414711 SMIM10L2BP0DMW5 78 aa18.51■□□□□ 0.55
CPNE1-208ENST00000414711 CLCN5P51795 746 aa18.51■□□□□ 0.55
CPNE1-208ENST00000414711 USH1GQ495M9 461 aa18.51■□□□□ 0.55
CPNE1-208ENST00000414711 RGS22Q8NE09 1264 aa18.51■□□□□ 0.55
CPNE1-208ENST00000414711 SPATA33Q96N06 139 aa18.51■□□□□ 0.55
CPNE1-208ENST00000414711 TAAR1Q96RJ0 339 aa18.51■□□□□ 0.55
CPNE1-208ENST00000414711 IWS1Q96ST2 819 aa18.51■□□□□ 0.55
CPNE1-208ENST00000414711 C16orf70Q9BSU1 422 aa18.51■□□□□ 0.55
CPNE1-208ENST00000414711 NACAP1Q9BZK3 213 aa18.51■□□□□ 0.55
CPNE1-208ENST00000414711 SMOC2Q9H3U7 446 aa18.51■□□□□ 0.55
CPNE1-208ENST00000414711 TSHZ2Q9NRE2 1034 aa18.51■□□□□ 0.55
CPNE1-208ENST00000414711 NR2E1Q9Y466 385 aa18.51■□□□□ 0.55
CPNE1-208ENST00000414711 M0R2C6 588 aa18.5■□□□□ 0.55
CPNE1-208ENST00000414711 PER2O15055 1255 aa18.5■□□□□ 0.55
CPNE1-208ENST00000414711 SORBS3O60504 671 aa18.5■□□□□ 0.55
CPNE1-208ENST00000414711 RLBP1P12271 317 aa18.5■□□□□ 0.55
CPNE1-208ENST00000414711 HSDL1Q3SXM5 330 aa18.5■□□□□ 0.55
CPNE1-208ENST00000414711 CMTR2Q8IYT2 770 aaKnown RBP18.5■□□□□ 0.55
CPNE1-208ENST00000414711 SYTL5Q8TDW5 730 aaPredicted RBP18.5■□□□□ 0.55
CPNE1-208ENST00000414711 COL20A1Q9P218 1284 aa18.5■□□□□ 0.55
CPNE1-208ENST00000414711 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.5■□□□□ 0.55
CPNE1-208ENST00000414711 PATL2C9JE40 543 aaKnown RBP18.49■□□□□ 0.55
CPNE1-208ENST00000414711 LMNAP02545 664 aaKnown RBP18.49■□□□□ 0.55
CPNE1-208ENST00000414711 SRGAP2BP0DMP2 458 aa18.49■□□□□ 0.55
CPNE1-208ENST00000414711 GHRP10912 638 aa18.49■□□□□ 0.55
CPNE1-208ENST00000414711 NOVP48745 357 aa18.49■□□□□ 0.55
CPNE1-208ENST00000414711 ANGPT1Q15389 498 aa18.49■□□□□ 0.55
CPNE1-208ENST00000414711 FAM26DQ5JW98 314 aa18.49■□□□□ 0.55
CPNE1-208ENST00000414711 MYSM1Q5VVJ2 828 aa18.49■□□□□ 0.55
CPNE1-208ENST00000414711 RMDN3Q96TC7 470 aa18.49■□□□□ 0.55
CPNE1-208ENST00000414711 CDCA3Q99618 268 aaPredicted RBP18.49■□□□□ 0.55
CPNE1-208ENST00000414711 NAPBQ9H115 298 aa18.49■□□□□ 0.55
CPNE1-208ENST00000414711 S1PR5Q9H228 398 aa18.49■□□□□ 0.55
CPNE1-208ENST00000414711 DLL3Q9NYJ7 618 aa18.49■□□□□ 0.55
CPNE1-208ENST00000414711 CHD6Q8TD26 2715 aa18.49■□□□□ 0.55
CPNE1-208ENST00000414711 CFAP47Q6ZTR5 3102 aa18.48■□□□□ 0.55
CPNE1-208ENST00000414711 EIF3JO75822 258 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms