RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 PLA2G4DQ86XP0 818 aa16.73■□□□□ 0.27
CHD1-202ENST00000414220 FAM184AQ8NB25 1140 aa16.73■□□□□ 0.27
CHD1-202ENST00000414220 NSUN7Q8NE18 718 aaKnown RBP16.73■□□□□ 0.27
CHD1-202ENST00000414220 SEPT1Q8WYJ6 367 aa16.73■□□□□ 0.27
CHD1-202ENST00000414220 TNPO1Q92973 898 aaKnown RBP16.73■□□□□ 0.27
CHD1-202ENST00000414220 TBC1D32Q96NH3 1257 aa16.73■□□□□ 0.27
CHD1-202ENST00000414220 NAP1L4Q99733 375 aaKnown RBP16.73■□□□□ 0.27
CHD1-202ENST00000414220 UBE2OQ9C0C9 1292 aaKnown RBP16.73■□□□□ 0.27
CHD1-202ENST00000414220 PKD2L1Q9P0L9 805 aa16.73■□□□□ 0.27
CHD1-202ENST00000414220 KIF3AQ9Y496 699 aa16.73■□□□□ 0.27
CHD1-202ENST00000414220 TNRC18O15417 2968 aaPredicted RBP16.73■□□□□ 0.27
CHD1-202ENST00000414220 KIAA1217Q5T5P2 1943 aa16.72■□□□□ 0.27
CHD1-202ENST00000414220 A0A1W2PPC1 479 aa16.72■□□□□ 0.27
CHD1-202ENST00000414220 LARGE1O95461 756 aa16.72■□□□□ 0.27
CHD1-202ENST00000414220 CTDNEP1O95476 244 aa16.72■□□□□ 0.27
CHD1-202ENST00000414220 HOXD8P13378 290 aaPredicted RBP16.72■□□□□ 0.27
CHD1-202ENST00000414220 KCNA2P16389 499 aa16.72■□□□□ 0.27
CHD1-202ENST00000414220 MAGEA10P43363 369 aaPredicted RBP16.72■□□□□ 0.27
CHD1-202ENST00000414220 SP4Q02446 784 aa16.72■□□□□ 0.27
CHD1-202ENST00000414220 SEMA3FQ13275 785 aa16.72■□□□□ 0.27
CHD1-202ENST00000414220 MFSD10Q14728 455 aa16.72■□□□□ 0.27
CHD1-202ENST00000414220 NONOQ15233 471 aaKnown RBP eCLIP16.72■□□□□ 0.27
CHD1-202ENST00000414220 SAFBQ15424 915 aaKnown RBP eCLIP16.72■□□□□ 0.27
CHD1-202ENST00000414220 KIAA0753Q2KHM9 967 aa16.72■□□□□ 0.27
CHD1-202ENST00000414220 CCDC83Q8IWF9 413 aa16.72■□□□□ 0.27
CHD1-202ENST00000414220 RASGRP4Q8TDF6 673 aa16.72■□□□□ 0.27
CHD1-202ENST00000414220 GPR20Q99678 358 aa16.72■□□□□ 0.27
CHD1-202ENST00000414220 GDF15Q99988 308 aa16.72■□□□□ 0.27
CHD1-202ENST00000414220 PHF20Q9BVI0 1012 aa16.72■□□□□ 0.27
CHD1-202ENST00000414220 BACH2Q9BYV9 841 aa16.72■□□□□ 0.27
CHD1-202ENST00000414220 JPH1Q9HDC5 661 aaPredicted RBP16.72■□□□□ 0.27
CHD1-202ENST00000414220 SLC9A2Q9UBY0 812 aa16.72■□□□□ 0.27
CHD1-202ENST00000414220 KCNJ14Q9UNX9 436 aa16.72■□□□□ 0.27
CHD1-202ENST00000414220 COLQQ9Y215 455 aaPredicted RBP16.72■□□□□ 0.27
CHD1-202ENST00000414220 NFASCO94856 1347 aa16.71■□□□□ 0.27
CHD1-202ENST00000414220 H3BRB1 525 aa16.71■□□□□ 0.27
CHD1-202ENST00000414220 ATP9AO75110 1047 aa16.71■□□□□ 0.27
CHD1-202ENST00000414220 F2P00734 622 aa16.71■□□□□ 0.27
CHD1-202ENST00000414220 TIMP1P01033 207 aa16.71■□□□□ 0.27
CHD1-202ENST00000414220 CD4P01730 458 aa16.71■□□□□ 0.27
CHD1-202ENST00000414220 CIITAP33076 1130 aa16.71■□□□□ 0.27
CHD1-202ENST00000414220 SESTD1Q86VW0 696 aa16.71■□□□□ 0.27
CHD1-202ENST00000414220 TMEM199Q8N511 208 aa16.71■□□□□ 0.27
CHD1-202ENST00000414220 CCDC155Q8N6L0 562 aa16.71■□□□□ 0.27
CHD1-202ENST00000414220 TBCKQ8TEA7 893 aa16.71■□□□□ 0.27
CHD1-202ENST00000414220 AIFM3Q96NN9 605 aa16.71■□□□□ 0.27
CHD1-202ENST00000414220 ZNF577Q9BSK1 485 aa16.71■□□□□ 0.27
CHD1-202ENST00000414220 TUT1Q9H6E5 874 aaKnown RBP16.71■□□□□ 0.27
CHD1-202ENST00000414220 AZI2Q9H6S1 392 aa16.71■□□□□ 0.27
CHD1-202ENST00000414220 AGO4Q9HCK5 861 aaKnown RBP16.71■□□□□ 0.27
CHD1-202ENST00000414220 TBC1D22BQ9NU19 505 aa16.71■□□□□ 0.27
CHD1-202ENST00000414220 GRIN2DO15399 1336 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 TRIM43BA6NCK2 446 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 B4GALT4O60513 344 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 LGALS2P05162 132 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 ZNF286BP0CG31 522 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 ARP10275 920 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 GNAT1P11488 350 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 KRT2P35908 639 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 BFSP2Q13515 415 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 PRR16Q569H4 304 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 UTP14CQ5TAP6 766 aaKnown RBP16.7■□□□□ 0.26
CHD1-202ENST00000414220 SH3RF1Q7Z6J0 888 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 RETREG2Q8NC44 543 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 CYP2W1Q8TAV3 490 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 KAT2BQ92831 832 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 GLG1Q92896 1179 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 BADQ92934 168 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 TRIM43Q96BQ3 446 aaPredicted RBP16.7■□□□□ 0.26
CHD1-202ENST00000414220 TRPV6Q9H1D0 765 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 HIPK3Q9H422 1215 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 SMARCAD1Q9H4L7 1026 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 TBX21Q9UL17 535 aa16.7■□□□□ 0.26
CHD1-202ENST00000414220 FAM86B1E9PN63 330 aa16.69■□□□□ 0.26
CHD1-202ENST00000414220 IPO5O00410 1097 aaKnown RBP16.69■□□□□ 0.26
CHD1-202ENST00000414220 FAM86B2P0C5J1 330 aa16.69■□□□□ 0.26
CHD1-202ENST00000414220 FDPSP14324 419 aaKnown RBP16.69■□□□□ 0.26
CHD1-202ENST00000414220 TCF7P36402 384 aaPredicted RBP16.69■□□□□ 0.26
CHD1-202ENST00000414220 PTGISQ16647 500 aa16.69■□□□□ 0.26
CHD1-202ENST00000414220 MFSD5Q6N075 450 aa16.69■□□□□ 0.26
CHD1-202ENST00000414220 CRYGNQ8WXF5 182 aa16.69■□□□□ 0.26
CHD1-202ENST00000414220 ERAP1Q9NZ08 941 aa16.69■□□□□ 0.26
CHD1-202ENST00000414220 HAS3O00219 553 aa16.68■□□□□ 0.26
CHD1-202ENST00000414220 JAK2O60674 1132 aa16.68■□□□□ 0.26
CHD1-202ENST00000414220 FPGSQ05932 587 aa16.68■□□□□ 0.26
CHD1-202ENST00000414220 PPIGQ13427 754 aaKnown RBP eCLIP16.68■□□□□ 0.26
CHD1-202ENST00000414220 MOXD1Q6UVY6 613 aa16.68■□□□□ 0.26
CHD1-202ENST00000414220 C8orf76Q96K31 380 aa16.68■□□□□ 0.26
CHD1-202ENST00000414220 C16orf70Q9BSU1 422 aa16.68■□□□□ 0.26
CHD1-202ENST00000414220 PPP1R12CQ9BZL4 782 aa16.68■□□□□ 0.26
CHD1-202ENST00000414220 TRMT13Q9NUP7 481 aaKnown RBP16.68■□□□□ 0.26
CHD1-202ENST00000414220 GTF2IRD1Q9UHL9 959 aa16.68■□□□□ 0.26
CHD1-202ENST00000414220 ALPK3Q96L96 1907 aa16.67■□□□□ 0.26
CHD1-202ENST00000414220 IGLV3-22A0A075B6J6 115 aa16.67■□□□□ 0.26
CHD1-202ENST00000414220 C17orf102A2RUQ5 167 aa16.67■□□□□ 0.26
CHD1-202ENST00000414220 M0R2N6 131 aa16.67■□□□□ 0.26
CHD1-202ENST00000414220 MARCH6O60337 910 aa16.67■□□□□ 0.26
CHD1-202ENST00000414220 GCFC2P16383 781 aaKnown RBP16.67■□□□□ 0.26
CHD1-202ENST00000414220 KRT76Q01546 638 aa16.67■□□□□ 0.26
CHD1-202ENST00000414220 GNL2Q13823 731 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms