RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 ADD1P35611 737 aaKnown RBP19.33■□□□□ 0.68
SCAMP4-204ENST00000414057 NFKBIBQ15653 356 aa19.33■□□□□ 0.68
SCAMP4-204ENST00000414057 NTRK3Q16288 839 aa19.33■□□□□ 0.68
SCAMP4-204ENST00000414057 PTGISQ16647 500 aa19.33■□□□□ 0.68
SCAMP4-204ENST00000414057 OTOP2Q7RTS6 562 aa19.33■□□□□ 0.68
SCAMP4-204ENST00000414057 PIBF1Q8WXW3 757 aa19.33■□□□□ 0.68
SCAMP4-204ENST00000414057 WASF1Q92558 559 aa19.33■□□□□ 0.68
SCAMP4-204ENST00000414057 MYL10Q9BUA6 226 aa19.33■□□□□ 0.68
SCAMP4-204ENST00000414057 FAM217BQ9NTX9 383 aaPredicted RBP19.33■□□□□ 0.68
SCAMP4-204ENST00000414057 MSRAQ9UJ68 235 aa19.33■□□□□ 0.68
SCAMP4-204ENST00000414057 LAMA2P24043 3122 aaKnown RBP19.32■□□□□ 0.68
SCAMP4-204ENST00000414057 PPFIA4O75335 1185 aa19.32■□□□□ 0.68
SCAMP4-204ENST00000414057 PTMSP20962 102 aa19.32■□□□□ 0.68
SCAMP4-204ENST00000414057 TRIM22Q8IYM9 498 aa19.32■□□□□ 0.68
SCAMP4-204ENST00000414057 C7orf31Q8N865 590 aa19.32■□□□□ 0.68
SCAMP4-204ENST00000414057 CAGE1Q8TC20 777 aa19.32■□□□□ 0.68
SCAMP4-204ENST00000414057 SCLYQ96I15 445 aa19.32■□□□□ 0.68
SCAMP4-204ENST00000414057 PBX4Q9BYU1 374 aa19.32■□□□□ 0.68
SCAMP4-204ENST00000414057 ZNF576Q9H609 170 aa19.32■□□□□ 0.68
SCAMP4-204ENST00000414057 MLXIPQ9HAP2 919 aa19.32■□□□□ 0.68
SCAMP4-204ENST00000414057 MTMR6Q9Y217 621 aa19.32■□□□□ 0.68
SCAMP4-204ENST00000414057 SLC4A7Q9Y6M7 1214 aa19.32■□□□□ 0.68
SCAMP4-204ENST00000414057 FOSL2P15408 326 aa19.31■□□□□ 0.68
SCAMP4-204ENST00000414057 RXRAP19793 462 aa19.31■□□□□ 0.68
SCAMP4-204ENST00000414057 CELF3Q5SZQ8 465 aaKnown RBP19.31■□□□□ 0.68
SCAMP4-204ENST00000414057 MYSM1Q5VVJ2 828 aa19.31■□□□□ 0.68
SCAMP4-204ENST00000414057 RAB11FIP4Q86YS3 637 aa19.31■□□□□ 0.68
SCAMP4-204ENST00000414057 SPATA33Q96N06 139 aa19.31■□□□□ 0.68
SCAMP4-204ENST00000414057 ORC3Q9UBD5 711 aaPredicted RBP19.31■□□□□ 0.68
SCAMP4-204ENST00000414057 COL6A3P12111 3177 aa19.31■□□□□ 0.68
SCAMP4-204ENST00000414057 SCN10AQ9Y5Y9 1956 aa19.3■□□□□ 0.68
SCAMP4-204ENST00000414057 VPS37CA5D8V6 355 aaPredicted RBP19.3■□□□□ 0.68
SCAMP4-204ENST00000414057 ZBBXA8MT70 800 aa19.3■□□□□ 0.68
SCAMP4-204ENST00000414057 GOLGA6L22H0YM25 854 aa19.3■□□□□ 0.68
SCAMP4-204ENST00000414057 H3BQV1 296 aa19.3■□□□□ 0.68
SCAMP4-204ENST00000414057 PIK3CDO00329 1044 aa19.3■□□□□ 0.68
SCAMP4-204ENST00000414057 RGS20O76081 388 aa19.3■□□□□ 0.68
SCAMP4-204ENST00000414057 PARNO95453 639 aaKnown RBP19.3■□□□□ 0.68
SCAMP4-204ENST00000414057 GGPS1O95749 300 aa19.3■□□□□ 0.68
SCAMP4-204ENST00000414057 F13A1P00488 732 aa19.3■□□□□ 0.68
SCAMP4-204ENST00000414057 FDPSP14324 419 aaKnown RBP19.3■□□□□ 0.68
SCAMP4-204ENST00000414057 PSEN2P49810 448 aa19.3■□□□□ 0.68
SCAMP4-204ENST00000414057 SSRP1Q08945 709 aaKnown RBP19.3■□□□□ 0.68
SCAMP4-204ENST00000414057 XRRA1Q6P2D8 792 aa19.3■□□□□ 0.68
SCAMP4-204ENST00000414057 MYLIPQ8WY64 445 aa19.3■□□□□ 0.68
SCAMP4-204ENST00000414057 KAT2BQ92831 832 aa19.3■□□□□ 0.68
SCAMP4-204ENST00000414057 RNF26Q9BY78 433 aaPredicted RBP19.3■□□□□ 0.68
SCAMP4-204ENST00000414057 GTF2IRD1Q9UHL9 959 aa19.3■□□□□ 0.68
SCAMP4-204ENST00000414057 DDX11L8A8MPP1 907 aa19.29■□□□□ 0.68
SCAMP4-204ENST00000414057 F2P00734 622 aa19.29■□□□□ 0.68
SCAMP4-204ENST00000414057 IQCF3P0C7M6 154 aa19.29■□□□□ 0.68
SCAMP4-204ENST00000414057 NEDD9Q14511 834 aa19.29■□□□□ 0.68
SCAMP4-204ENST00000414057 AFAP1L1Q8TED9 768 aa19.29■□□□□ 0.68
SCAMP4-204ENST00000414057 CXXC1Q9P0U4 656 aaPredicted RBP19.29■□□□□ 0.68
SCAMP4-204ENST00000414057 FRMPD4Q14CM0 1322 aa19.29■□□□□ 0.68
SCAMP4-204ENST00000414057 GRXCR1A8MXD5 290 aa19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 PLEKHA8P1O95397 391 aa19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 BAG4O95429 457 aaKnown RBP19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 HOXD8P13378 290 aaPredicted RBP19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 UBA1P22314 1058 aaKnown RBP19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 ICAM3P32942 547 aa19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 MCM4P33991 863 aa19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 MFSD10Q14728 455 aa19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 KIAA0753Q2KHM9 967 aa19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 DEFB128Q7Z7B8 93 aa19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 SRBD1Q8N5C6 995 aaKnown RBP19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 MAFAQ8NHW3 353 aaPredicted RBP19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 IL31RAQ8NI17 732 aa19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 ALG1Q9BT22 464 aa19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 ZSCAN16Q9H4T2 348 aaPredicted RBP19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 KIAA1217Q5T5P2 1943 aa19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 NOP56O00567 594 aaKnown RBP19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 FIBPO43427 364 aa19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 DEXIO95424 95 aa19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 GRIN2CQ14957 1233 aa19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 HSDL1Q3SXM5 330 aa19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 GDF6Q6KF10 455 aaPredicted RBP19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 TMTC3Q6ZXV5 915 aa19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 PPP1R13LQ8WUF5 828 aa19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 INPP4AQ96PE3 977 aaPredicted RBP19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 FTOQ9C0B1 505 aaKnown RBP eCLIP19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 SLC28A3Q9HAS3 691 aa19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 HDAC6Q9UBN7 1215 aa19.28■□□□□ 0.68
SCAMP4-204ENST00000414057 HAS3O00219 553 aa19.27■□□□□ 0.67
SCAMP4-204ENST00000414057 ATP2A2P16615 1042 aaKnown RBP19.27■□□□□ 0.67
SCAMP4-204ENST00000414057 PBX2P40425 430 aa19.27■□□□□ 0.67
SCAMP4-204ENST00000414057 AKAP17AQ02040 695 aaKnown RBP19.27■□□□□ 0.67
SCAMP4-204ENST00000414057 PCNX4Q63HM2 1172 aa19.27■□□□□ 0.67
SCAMP4-204ENST00000414057 USP17L6PQ6QN14 398 aa19.27■□□□□ 0.67
SCAMP4-204ENST00000414057 NLRX1Q86UT6 975 aa19.27■□□□□ 0.67
SCAMP4-204ENST00000414057 C8orf76Q96K31 380 aa19.27■□□□□ 0.67
SCAMP4-204ENST00000414057 GAS2L1Q99501 681 aaPredicted RBP19.27■□□□□ 0.67
SCAMP4-204ENST00000414057 SLC26A6Q9BXS9 759 aa19.27■□□□□ 0.67
SCAMP4-204ENST00000414057 PSTPIP2Q9H939 334 aa19.27■□□□□ 0.67
SCAMP4-204ENST00000414057 SPATA31C2B4DYI2 1134 aa19.26■□□□□ 0.67
SCAMP4-204ENST00000414057 DLL1O00548 723 aa19.26■□□□□ 0.67
SCAMP4-204ENST00000414057 MEIS2O14770 477 aa19.26■□□□□ 0.67
SCAMP4-204ENST00000414057 PRPF3O43395 683 aaKnown RBP19.26■□□□□ 0.67
SCAMP4-204ENST00000414057 ZNF286BP0CG31 522 aa19.26■□□□□ 0.67
SCAMP4-204ENST00000414057 SELPP16109 830 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms