RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 A0A1W2PQ27 194 aa13.11□□□□□ -0.31
HDAC9-206ENST00000413380 A0A1W2PQ64 194 aa13.11□□□□□ -0.31
HDAC9-206ENST00000413380 A0A1W2PQD8 194 aa13.11□□□□□ -0.31
HDAC9-206ENST00000413380 CUTAO60888 179 aa13.11□□□□□ -0.31
HDAC9-206ENST00000413380 GABBR2O75899 941 aa13.11□□□□□ -0.31
HDAC9-206ENST00000413380 HSPA8P11142 646 aaKnown RBP13.11□□□□□ -0.31
HDAC9-206ENST00000413380 LONP1P36776 959 aaKnown RBP13.11□□□□□ -0.31
HDAC9-206ENST00000413380 ITGB3BPQ13352 177 aaPredicted RBP13.11□□□□□ -0.31
HDAC9-206ENST00000413380 PPP2R5CQ13362 524 aa13.11□□□□□ -0.31
HDAC9-206ENST00000413380 PDIA5Q14554 519 aa13.11□□□□□ -0.31
HDAC9-206ENST00000413380 CCL14Q16627 93 aa13.11□□□□□ -0.31
HDAC9-206ENST00000413380 ADALQ6DHV7 355 aa13.11□□□□□ -0.31
HDAC9-206ENST00000413380 OTOP1Q7RTM1 612 aa13.11□□□□□ -0.31
HDAC9-206ENST00000413380 SCFD2Q8WU76 684 aa13.11□□□□□ -0.31
HDAC9-206ENST00000413380 TRIB2Q92519 343 aa13.11□□□□□ -0.31
HDAC9-206ENST00000413380 AK8Q96MA6 479 aa13.11□□□□□ -0.31
HDAC9-206ENST00000413380 GDPD2Q9HCC8 539 aa13.11□□□□□ -0.31
HDAC9-206ENST00000413380 TBC1D22BQ9NU19 505 aa13.11□□□□□ -0.31
HDAC9-206ENST00000413380 VAV3Q9UKW4 847 aa13.11□□□□□ -0.31
HDAC9-206ENST00000413380 PCDHA7Q9UN72 937 aa13.11□□□□□ -0.31
HDAC9-206ENST00000413380 MRVI1Q9Y6F6 885 aa13.11□□□□□ -0.31
HDAC9-206ENST00000413380 MAP3K13O43283 966 aa13.1□□□□□ -0.31
HDAC9-206ENST00000413380 SLC26A4O43511 780 aa13.1□□□□□ -0.31
HDAC9-206ENST00000413380 ZNF865P0CJ78 1059 aaPredicted RBP13.1□□□□□ -0.31
HDAC9-206ENST00000413380 MARCKSP29966 332 aaPredicted RBP13.1□□□□□ -0.31
HDAC9-206ENST00000413380 MCM4P33991 863 aa13.1□□□□□ -0.31
HDAC9-206ENST00000413380 ACVR2BQ13705 512 aa13.1□□□□□ -0.31
HDAC9-206ENST00000413380 DTHD1Q6ZMT9 781 aa13.1□□□□□ -0.31
HDAC9-206ENST00000413380 FBXO16Q8IX29 292 aaPredicted RBP13.1□□□□□ -0.31
HDAC9-206ENST00000413380 GIMAP8Q8ND71 665 aaPredicted RBP13.1□□□□□ -0.31
HDAC9-206ENST00000413380 ZFP91Q96JP5 570 aaPredicted RBP13.1□□□□□ -0.31
HDAC9-206ENST00000413380 ZNF577Q9BSK1 485 aa13.1□□□□□ -0.31
HDAC9-206ENST00000413380 LMBRD1Q9NUN5 540 aa13.1□□□□□ -0.31
HDAC9-206ENST00000413380 TSKSQ9UJT2 592 aa13.1□□□□□ -0.31
HDAC9-206ENST00000413380 DDX41Q9UJV9 622 aaKnown RBP13.1□□□□□ -0.31
HDAC9-206ENST00000413380 PCDHA12Q9UN75 941 aa13.1□□□□□ -0.31
HDAC9-206ENST00000413380 GOLGA6L22H0YM25 854 aa13.09□□□□□ -0.31
HDAC9-206ENST00000413380 FOXN1O15353 648 aa13.09□□□□□ -0.31
HDAC9-206ENST00000413380 ATP9AO75110 1047 aa13.09□□□□□ -0.31
HDAC9-206ENST00000413380 CYBAP13498 195 aa13.09□□□□□ -0.31
HDAC9-206ENST00000413380 UBA1P22314 1058 aaKnown RBP13.09□□□□□ -0.31
HDAC9-206ENST00000413380 ME1P48163 572 aa13.09□□□□□ -0.31
HDAC9-206ENST00000413380 SP2Q02086 613 aa13.09□□□□□ -0.31
HDAC9-206ENST00000413380 GRIN1Q05586 938 aa13.09□□□□□ -0.31
HDAC9-206ENST00000413380 NEDD9Q14511 834 aa13.09□□□□□ -0.31
HDAC9-206ENST00000413380 TTLL4Q14679 1199 aa13.09□□□□□ -0.31
HDAC9-206ENST00000413380 TMEM266Q2M3C6 531 aa13.09□□□□□ -0.31
HDAC9-206ENST00000413380 MAP3K21Q5TCX8 1036 aa13.09□□□□□ -0.31
HDAC9-206ENST00000413380 LRCH2Q5VUJ6 765 aa13.09□□□□□ -0.31
HDAC9-206ENST00000413380 IQSEC1Q6DN90 963 aa13.09□□□□□ -0.31
HDAC9-206ENST00000413380 SEPT14Q6ZU15 432 aa13.09□□□□□ -0.31
HDAC9-206ENST00000413380 SLAIN1Q8ND83 568 aa13.09□□□□□ -0.31
HDAC9-206ENST00000413380 RDM1Q8NG50 284 aa13.09□□□□□ -0.31
HDAC9-206ENST00000413380 EMID1Q96A84 441 aaPredicted RBP13.09□□□□□ -0.31
HDAC9-206ENST00000413380 RAB34Q9BZG1 259 aa13.09□□□□□ -0.31
HDAC9-206ENST00000413380 TTC12Q9H892 705 aaPredicted RBP13.09□□□□□ -0.31
HDAC9-206ENST00000413380 VWA3AA6NCI4 1184 aa13.08□□□□□ -0.32
HDAC9-206ENST00000413380 DDX11L8A8MPP1 907 aa13.08□□□□□ -0.32
HDAC9-206ENST00000413380 NKRFO15226 690 aaKnown RBP eCLIP13.08□□□□□ -0.32
HDAC9-206ENST00000413380 GAS7O60861 476 aa13.08□□□□□ -0.32
HDAC9-206ENST00000413380 ECM2O94769 699 aaPredicted RBP13.08□□□□□ -0.32
HDAC9-206ENST00000413380 ARIH2O95376 493 aa13.08□□□□□ -0.32
HDAC9-206ENST00000413380 HMGCRP04035 888 aa13.08□□□□□ -0.32
HDAC9-206ENST00000413380 CMA1P23946 247 aa13.08□□□□□ -0.32
HDAC9-206ENST00000413380 CYP2C19P33261 490 aa13.08□□□□□ -0.32
HDAC9-206ENST00000413380 TXKP42681 527 aa13.08□□□□□ -0.32
HDAC9-206ENST00000413380 CTCFP49711 727 aaPredicted RBP13.08□□□□□ -0.32
HDAC9-206ENST00000413380 UBE2HP62256 183 aa13.08□□□□□ -0.32
HDAC9-206ENST00000413380 KRT76Q01546 638 aa13.08□□□□□ -0.32
HDAC9-206ENST00000413380 DUSP28Q4G0W2 176 aa13.08□□□□□ -0.32
HDAC9-206ENST00000413380 MFSD14CQ5VZR4 134 aa13.08□□□□□ -0.32
HDAC9-206ENST00000413380 RESP18Q5W5W9 173 aa13.08□□□□□ -0.32
HDAC9-206ENST00000413380 ZNF746Q6NUN9 644 aaPredicted RBP13.08□□□□□ -0.32
HDAC9-206ENST00000413380 SHC4Q6S5L8 630 aa13.08□□□□□ -0.32
HDAC9-206ENST00000413380 METTL7BQ6UX53 244 aa13.08□□□□□ -0.32
HDAC9-206ENST00000413380 CLIC6Q96NY7 704 aa13.08□□□□□ -0.32
HDAC9-206ENST00000413380 TEKT3Q9BXF9 490 aa13.08□□□□□ -0.32
HDAC9-206ENST00000413380 CSRNP2Q9H175 543 aa13.08□□□□□ -0.32
HDAC9-206ENST00000413380 STK24Q9Y6E0 443 aa13.08□□□□□ -0.32
HDAC9-206ENST00000413380 ADCY3O60266 1144 aa13.07□□□□□ -0.32
HDAC9-206ENST00000413380 FARP2O94887 1054 aaPredicted RBP13.07□□□□□ -0.32
HDAC9-206ENST00000413380 ATG7O95352 703 aa13.07□□□□□ -0.32
HDAC9-206ENST00000413380 HSPA1AP0DMV8 641 aaKnown RBP13.07□□□□□ -0.32
HDAC9-206ENST00000413380 HSPA1BP0DMV9 641 aaKnown RBP13.07□□□□□ -0.32
HDAC9-206ENST00000413380 PTMSP20962 102 aa13.07□□□□□ -0.32
HDAC9-206ENST00000413380 NKX3-2P78367 333 aa13.07□□□□□ -0.32
HDAC9-206ENST00000413380 CCDC144BQ3MJ40 725 aa13.07□□□□□ -0.32
HDAC9-206ENST00000413380 CELF3Q5SZQ8 465 aaKnown RBP13.07□□□□□ -0.32
HDAC9-206ENST00000413380 HYIQ5T013 277 aa13.07□□□□□ -0.32
HDAC9-206ENST00000413380 EEPD1Q7L9B9 569 aa13.07□□□□□ -0.32
HDAC9-206ENST00000413380 SMAP1Q8IYB5 467 aaPredicted RBP13.07□□□□□ -0.32
HDAC9-206ENST00000413380 KCTD17Q8N5Z5 321 aa13.07□□□□□ -0.32
HDAC9-206ENST00000413380 GJA10Q969M2 543 aa13.07□□□□□ -0.32
HDAC9-206ENST00000413380 SDF4Q9BRK5 362 aa13.07□□□□□ -0.32
HDAC9-206ENST00000413380 CCSER1Q9C0I3 900 aa13.07□□□□□ -0.32
HDAC9-206ENST00000413380 PDGFCQ9NRA1 345 aa13.07□□□□□ -0.32
HDAC9-206ENST00000413380 HPSEQ9Y251 543 aa13.07□□□□□ -0.32
HDAC9-206ENST00000413380 Q9Y3F1 56 aa13.07□□□□□ -0.32
HDAC9-206ENST00000413380 TRIM17Q9Y577 477 aa13.07□□□□□ -0.32
HDAC9-206ENST00000413380 ARID2Q68CP9 1835 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms