RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 IFNL1Q8IU54 200 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 ERMNQ8TAM6 284 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 SPATA20Q8TB22 786 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 CCDC102AQ96A19 550 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 GPRASP2Q96D09 838 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 PAGE5Q96GU1 130 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 CDK5RAP3Q96JB5 506 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 FGD4Q96M96 766 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 IWS1Q96ST2 819 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 PLIN2Q99541 437 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 MTRQ99707 1265 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 NUDT12Q9BQG2 462 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 TEKT3Q9BXF9 490 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 NT5C3AQ9H0P0 336 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 UNC45AQ9H3U1 944 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 EFCC1Q9HA90 598 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 STK17AQ9UEE5 414 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 ADD3Q9UEY8 706 aaKnown RBP7.47□□□□□ -1.21
VPS41-204ENST00000413141 SSUH2Q9Y2M2 353 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 STK24Q9Y6E0 443 aa7.47□□□□□ -1.21
VPS41-204ENST00000413141 THSD7BQ9C0I4 1608 aa7.46□□□□□ -1.21
VPS41-204ENST00000413141 A0A087WWV3 80 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 POTEB3A0JP26 581 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 POTEFA5A3E0 1075 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 EML1O00423 815 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 DHX15O43143 795 aaKnown RBP7.46□□□□□ -1.22
VPS41-204ENST00000413141 CHMP2AO43633 222 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 GTPBP6O43824 516 aaPredicted RBP7.46□□□□□ -1.22
VPS41-204ENST00000413141 MED24O75448 989 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 MYL1P05976 194 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 RPA1P27694 616 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 CCT6AP40227 531 aaKnown RBP7.46□□□□□ -1.22
VPS41-204ENST00000413141 AFMP43652 599 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 INHBEP58166 350 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 DPYDQ12882 1025 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 TAF1CQ15572 869 aaPredicted RBP7.46□□□□□ -1.22
VPS41-204ENST00000413141 STXBP2Q15833 593 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 ECM1Q16610 540 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 DPCR1Q3MIW9 517 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 GNPTABQ3T906 1256 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 ANO6Q4KMQ2 910 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 POTEBQ6S5H4 581 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 POTEGQ6S5H5 508 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 C11orf57Q6ZUT1 292 aaPredicted RBP7.46□□□□□ -1.22
VPS41-204ENST00000413141 KCNK18Q7Z418 384 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 GPR142Q7Z601 462 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 ABRAQ8N0Z2 381 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 ZNF784Q8NCA9 323 aaPredicted RBP7.46□□□□□ -1.22
VPS41-204ENST00000413141 LARP4BQ92615 738 aaKnown RBP7.46□□□□□ -1.22
VPS41-204ENST00000413141 RAD54LQ92698 747 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 SMARCE1Q969G3 411 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 CDHR1Q96JP9 859 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 POLR3CQ9BUI4 534 aaPredicted RBP7.46□□□□□ -1.22
VPS41-204ENST00000413141 RBSNQ9H1K0 784 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 GRPEL1Q9HAV7 217 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 TBC1D22BQ9NU19 505 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 BLOC1S4Q9NUP1 217 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 KBTBD4Q9NVX7 518 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 PKD2L1Q9P0L9 805 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 PCDHA5Q9Y5H7 936 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 PLXNA1Q9UIW2 1896 aa7.46□□□□□ -1.22
VPS41-204ENST00000413141 LOC102724159A0A0B4J2E5 919 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 RASSF10A6NK89 507 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 DDX39AO00148 427 aaKnown RBP7.45□□□□□ -1.22
VPS41-204ENST00000413141 BIN1O00499 593 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 MAFGO15525 162 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 ATP9AO75110 1047 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 EIF3JO75822 258 aaKnown RBP7.45□□□□□ -1.22
VPS41-204ENST00000413141 SMC2O95347 1197 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 CAVIN2O95810 425 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 SPATA31C1P0DKV0 1188 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 KCNA2P16389 499 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 YY1P25490 414 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 ADORA2AP29274 412 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 CASP1P29466 404 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 MAPK4P31152 587 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 ICAM3P32942 547 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 SARSP49591 514 aaKnown RBP7.45□□□□□ -1.22
VPS41-204ENST00000413141 MRE11P49959 708 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 NLRP12P59046 1061 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 KRT76Q01546 638 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 CYP4A11Q02928 519 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 PDE4DQ08499 809 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 CUL4BQ13620 913 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 MORC3Q14149 939 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 GRB14Q14449 540 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 PWP2Q15269 919 aaKnown RBP7.45□□□□□ -1.22
VPS41-204ENST00000413141 L1TD1Q5T7N2 865 aaKnown RBP7.45□□□□□ -1.22
VPS41-204ENST00000413141 CYP4F22Q6NT55 531 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 PAXIP1Q6ZW49 1069 aaPredicted RBP7.45□□□□□ -1.22
VPS41-204ENST00000413141 CATSPER3Q86XQ3 398 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 TRIML1Q8N9V2 468 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 RNF214Q8ND24 703 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 FAM200AQ8TCP9 573 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 NEK9Q8TD19 979 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 MORC4Q8TE76 937 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 STAMQ92783 540 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 MPHOSPH6Q99547 160 aaKnown RBP7.45□□□□□ -1.22
VPS41-204ENST00000413141 HSD17B14Q9BPX1 270 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 EIF2AK1Q9BQI3 630 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms