RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 CCDC62Q6P9F0 684 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 TMC4Q7Z404 712 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 RAPGEF5Q92565 580 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 FANCGO15287 622 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 SART1O43290 800 aaKnown RBP15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 BAG3O95817 575 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 CTSWP56202 376 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 BYSLQ13895 437 aaKnown RBP15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 LRRC41Q15345 812 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 ZBTB38Q8NAP3 1195 aaPredicted RBP15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 ISCUQ9H1K1 167 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 VCX3BQ9H321 246 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 AZI2Q9H6S1 392 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 VCX3AQ9NNX9 186 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 A0A1W2PQJ5 194 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 CALUO43852 315 aaPredicted RBP15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 ATP6V1G2O95670 118 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 LTKP29376 864 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 ANKRD40Q6AI12 368 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 NEK8Q86SG6 692 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 ZBTB10Q96DT7 871 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 MTA3Q9BTC8 594 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 LARSQ9P2J5 1176 aaKnown RBP15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 HDAC9Q9UKV0 1011 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 STXBP3O00186 592 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 FGGP02679 453 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 LARP4BQ92615 738 aaKnown RBP15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 IQCGQ9H095 443 aaKnown RBP15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 SLITRK6Q9H5Y7 841 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 GREM2Q9H772 168 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 CHN1P15882 459 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 KRT15P19012 456 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 IL9RQ01113 521 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 ADAM9Q13443 819 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 PDXDC1Q6P996 788 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 HS2ST1Q7LGA3 356 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 KDM4CQ9H3R0 1056 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 GGA2Q9UJY4 613 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 KIDINS220Q9ULH0 1771 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 COL15A1P39059 1388 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 IFT172Q9UG01 1749 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 GLI1P08151 1106 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 PLEKP08567 350 aaPredicted RBP15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 ALKBH5Q6P6C2 394 aaKnown RBP15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 CREG2Q8IUH2 290 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 REXO1Q8N1G1 1221 aaKnown RBP15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 AMACRQ9UHK6 382 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 PNMA2Q9UL42 364 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 PASKQ96RG2 1323 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 FAM170AA1A519 330 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 PMS2P54278 862 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 MAP7Q14244 749 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 CCDC174Q6PII3 467 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 SAMD1Q6SPF0 538 aaPredicted RBP15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 ARHGEF18Q6ZSZ5 1173 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 CEP128Q6ZU80 1094 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 TMTC3Q6ZXV5 915 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 GDAP1Q8TB36 358 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 DENND2AQ9ULE3 1009 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 TRPC6Q9Y210 931 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 NOC2LQ9Y3T9 749 aaKnown RBP15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 XDHP47989 1333 aa15.13■□□□□ 0.01
CLTCL1-201ENST00000412649 SSU72P8A0A1W2PR75 194 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 SMCO2A6NFE2 343 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 EXOC3L4Q17RC7 722 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 FAM83BQ5T0W9 1011 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 OTUD6AQ7L8S5 288 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 FBXO41Q8TF61 875 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 SH3GL2Q99962 352 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 PANK4Q9NVE7 773 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 THAP12O43422 761 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 PCP11498 1178 aaKnown RBP15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 EDEM3Q9BZQ6 932 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 ETNK1Q9HBU6 452 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 GGT7Q9UJ14 662 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 PLAGL2Q9UPG8 496 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 DLG5Q8TDM6 1919 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 TROVE2P10155 538 aaKnown RBP eCLIP15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 PHLDB2Q86SQ0 1253 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 SNX24Q9Y343 169 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 PTPRUQ92729 1446 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 PP2D1A8MPX8 630 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 H0Y3Z8 333 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 CTNNA2P26232 953 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 TFAP4Q01664 338 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 SH2D4BQ5SQS7 431 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 DDX42Q86XP3 938 aaKnown RBP eCLIP15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 STAMBPL1Q96FJ0 436 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 PHF20Q9BVI0 1012 aa15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 ZBTB12Q9Y330 459 aaPredicted RBP15.12■□□□□ 0.01
CLTCL1-201ENST00000412649 GAS8O95995 478 aa15.11■□□□□ 0.01
CLTCL1-201ENST00000412649 NTRK3Q16288 839 aa15.11■□□□□ 0.01
CLTCL1-201ENST00000412649 ANKRD20A3Q5VUR7 823 aa15.11■□□□□ 0.01
CLTCL1-201ENST00000412649 USP38Q8NB14 1042 aa15.11■□□□□ 0.01
CLTCL1-201ENST00000412649 PNMA1Q8ND90 353 aa15.11■□□□□ 0.01
CLTCL1-201ENST00000412649 MRRFQ96E11 262 aaKnown RBP15.11■□□□□ 0.01
CLTCL1-201ENST00000412649 LRRC10BA6NIK2 292 aa15.11■□□□□ 0.01
CLTCL1-201ENST00000412649 RHOBTB3O94955 611 aa15.11■□□□□ 0.01
CLTCL1-201ENST00000412649 GHRP10912 638 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms