RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 SP4Q02446 784 aa15.85■□□□□ 0.13
CPNE1-206ENST00000412056 LETM2Q2VYF4 491 aa15.85■□□□□ 0.13
CPNE1-206ENST00000412056 HSDL1Q3SXM5 330 aa15.85■□□□□ 0.13
CPNE1-206ENST00000412056 BRDTQ58F21 947 aaPredicted RBP15.85■□□□□ 0.13
CPNE1-206ENST00000412056 METTL7BQ6UX53 244 aa15.85■□□□□ 0.13
CPNE1-206ENST00000412056 PPTC7Q8NI37 304 aa15.85■□□□□ 0.13
CPNE1-206ENST00000412056 INTS4Q96HW7 963 aaKnown RBP15.85■□□□□ 0.13
CPNE1-206ENST00000412056 TRIP12Q14669 1992 aaPredicted RBP15.85■□□□□ 0.13
CPNE1-206ENST00000412056 KAT6AQ92794 2004 aa15.85■□□□□ 0.13
CPNE1-206ENST00000412056 WNT7AO00755 349 aa15.84■□□□□ 0.13
CPNE1-206ENST00000412056 PURAQ00577 322 aaKnown RBP15.84■□□□□ 0.13
CPNE1-206ENST00000412056 ITGB3BPQ13352 177 aaPredicted RBP15.84■□□□□ 0.13
CPNE1-206ENST00000412056 LRRC26Q2I0M4 334 aa15.84■□□□□ 0.13
CPNE1-206ENST00000412056 MOXD1Q6UVY6 613 aa15.84■□□□□ 0.13
CPNE1-206ENST00000412056 SLC39A5Q6ZMH5 540 aa15.84■□□□□ 0.13
CPNE1-206ENST00000412056 GLT1D1Q96MS3 346 aa15.84■□□□□ 0.13
CPNE1-206ENST00000412056 FOXP1Q9H334 677 aaPredicted RBP15.84■□□□□ 0.13
CPNE1-206ENST00000412056 STARD7Q9NQZ5 370 aa15.84■□□□□ 0.13
CPNE1-206ENST00000412056 POLR3EQ9NVU0 708 aa15.84■□□□□ 0.13
CPNE1-206ENST00000412056 NFASCO94856 1347 aa15.84■□□□□ 0.13
CPNE1-206ENST00000412056 MYH15Q9Y2K3 1946 aa15.84■□□□□ 0.13
CPNE1-206ENST00000412056 CYP3A7-CYP3A51PA0A087WV96 503 aa15.83■□□□□ 0.12
CPNE1-206ENST00000412056 DDX39AO00148 427 aaKnown RBP15.83■□□□□ 0.12
CPNE1-206ENST00000412056 SLC37A4O43826 429 aa15.83■□□□□ 0.12
CPNE1-206ENST00000412056 ZNF286BP0CG31 522 aa15.83■□□□□ 0.12
CPNE1-206ENST00000412056 HOXD8P13378 290 aaPredicted RBP15.83■□□□□ 0.12
CPNE1-206ENST00000412056 CYP3A7P24462 503 aa15.83■□□□□ 0.12
CPNE1-206ENST00000412056 PSMC6P62333 389 aa15.83■□□□□ 0.12
CPNE1-206ENST00000412056 MLLT1Q03111 559 aaPredicted RBP15.83■□□□□ 0.12
CPNE1-206ENST00000412056 DGKDQ16760 1214 aa15.83■□□□□ 0.12
CPNE1-206ENST00000412056 Q4G0T1 1027 aa15.83■□□□□ 0.12
CPNE1-206ENST00000412056 LARP1BQ659C4 914 aaKnown RBP15.83■□□□□ 0.12
CPNE1-206ENST00000412056 GIMAP8Q8ND71 665 aaPredicted RBP15.83■□□□□ 0.12
CPNE1-206ENST00000412056 VTI1AQ96AJ9 217 aa15.83■□□□□ 0.12
CPNE1-206ENST00000412056 MBOAT7Q96N66 472 aa15.83■□□□□ 0.12
CPNE1-206ENST00000412056 GPR20Q99678 358 aa15.83■□□□□ 0.12
CPNE1-206ENST00000412056 ZNF577Q9BSK1 485 aa15.83■□□□□ 0.12
CPNE1-206ENST00000412056 HTATIP2Q9BUP3 242 aa15.83■□□□□ 0.12
CPNE1-206ENST00000412056 BRCA2P51587 3418 aa15.82■□□□□ 0.12
CPNE1-206ENST00000412056 H3BQV1 296 aa15.82■□□□□ 0.12
CPNE1-206ENST00000412056 IPO5O00410 1097 aaKnown RBP15.82■□□□□ 0.12
CPNE1-206ENST00000412056 NOP56O00567 594 aaKnown RBP15.82■□□□□ 0.12
CPNE1-206ENST00000412056 MSH4O15457 936 aa15.82■□□□□ 0.12
CPNE1-206ENST00000412056 CCNT1O60563 726 aaKnown RBP15.82■□□□□ 0.12
CPNE1-206ENST00000412056 CABYRO75952 493 aa15.82■□□□□ 0.12
CPNE1-206ENST00000412056 RTP1P59025 263 aa15.82■□□□□ 0.12
CPNE1-206ENST00000412056 GNL2Q13823 731 aaKnown RBP15.82■□□□□ 0.12
CPNE1-206ENST00000412056 SNX17Q15036 470 aa15.82■□□□□ 0.12
CPNE1-206ENST00000412056 MCTP1Q6DN14 999 aa15.82■□□□□ 0.12
CPNE1-206ENST00000412056 PPP1R13LQ8WUF5 828 aa15.82■□□□□ 0.12
CPNE1-206ENST00000412056 GJA10Q969M2 543 aa15.82■□□□□ 0.12
CPNE1-206ENST00000412056 SDF4Q9BRK5 362 aa15.82■□□□□ 0.12
CPNE1-206ENST00000412056 MTG1Q9BT17 334 aaPredicted RBP15.82■□□□□ 0.12
CPNE1-206ENST00000412056 JPH1Q9HDC5 661 aaPredicted RBP15.82■□□□□ 0.12
CPNE1-206ENST00000412056 SLC9A2Q9UBY0 812 aa15.82■□□□□ 0.12
CPNE1-206ENST00000412056 DDX25Q9UHL0 483 aaKnown RBP15.82■□□□□ 0.12
CPNE1-206ENST00000412056 ELP1O95163 1332 aa15.82■□□□□ 0.12
CPNE1-206ENST00000412056 A0A0U1RQG5 324 aaPredicted RBP15.81■□□□□ 0.12
CPNE1-206ENST00000412056 GSTTP1A0A1W2PQM5 241 aa15.81■□□□□ 0.12
CPNE1-206ENST00000412056 GRIN2DO15399 1336 aa15.81■□□□□ 0.12
CPNE1-206ENST00000412056 DHX15O43143 795 aaKnown RBP15.81■□□□□ 0.12
CPNE1-206ENST00000412056 KPNA6O60684 536 aa15.81■□□□□ 0.12
CPNE1-206ENST00000412056 LGALS2P05162 132 aa15.81■□□□□ 0.12
CPNE1-206ENST00000412056 GCFC2P16383 781 aaKnown RBP15.81■□□□□ 0.12
CPNE1-206ENST00000412056 U2AF2P26368 475 aaKnown RBP eCLIP15.81■□□□□ 0.123e-26■□□□□ 9.9
CPNE1-206ENST00000412056 TRIM60Q495X7 471 aa15.81■□□□□ 0.12
CPNE1-206ENST00000412056 PDE4DIPQ5VU43 2346 aa15.81■□□□□ 0.12
CPNE1-206ENST00000412056 PPP4R3AQ6IN85 833 aa15.81■□□□□ 0.12
CPNE1-206ENST00000412056 TRIM50Q86XT4 487 aa15.81■□□□□ 0.12
CPNE1-206ENST00000412056 NOSTRINQ8IVI9 506 aa15.81■□□□□ 0.12
CPNE1-206ENST00000412056 KAT2BQ92831 832 aa15.81■□□□□ 0.12
CPNE1-206ENST00000412056 CCNE2O96020 404 aa15.8■□□□□ 0.12
CPNE1-206ENST00000412056 ATP2B1P20020 1258 aa15.8■□□□□ 0.12
CPNE1-206ENST00000412056 TCF7P36402 384 aaPredicted RBP15.8■□□□□ 0.12
CPNE1-206ENST00000412056 ITGA7Q13683 1181 aa15.8■□□□□ 0.12
CPNE1-206ENST00000412056 UTP14CQ5TAP6 766 aaKnown RBP15.8■□□□□ 0.12
CPNE1-206ENST00000412056 POTEDQ86YR6 584 aa15.8■□□□□ 0.12
CPNE1-206ENST00000412056 SPRYD3Q8NCJ5 442 aa15.8■□□□□ 0.12
CPNE1-206ENST00000412056 ETNPPLQ8TBG4 499 aa15.8■□□□□ 0.12
CPNE1-206ENST00000412056 DPF3Q92784 378 aa15.8■□□□□ 0.12
CPNE1-206ENST00000412056 SLC5A5Q92911 643 aa15.8■□□□□ 0.12
CPNE1-206ENST00000412056 NAP1L4Q99733 375 aaKnown RBP15.8■□□□□ 0.12
CPNE1-206ENST00000412056 C16orf70Q9BSU1 422 aa15.8■□□□□ 0.12
CPNE1-206ENST00000412056 ATP11BQ9Y2G3 1177 aa15.8■□□□□ 0.12
CPNE1-206ENST00000412056 LTBP2Q14767 1821 aa15.8■□□□□ 0.12
CPNE1-206ENST00000412056 VPS37CA5D8V6 355 aaPredicted RBP15.79■□□□□ 0.12
CPNE1-206ENST00000412056 ARVCFO00192 962 aa15.79■□□□□ 0.12
CPNE1-206ENST00000412056 PPFIA4O75335 1185 aa15.79■□□□□ 0.12
CPNE1-206ENST00000412056 F2P00734 622 aa15.79■□□□□ 0.12
CPNE1-206ENST00000412056 HSP90AA1P07900 732 aaKnown RBP15.79■□□□□ 0.12
CPNE1-206ENST00000412056 PDCP20941 246 aa15.79■□□□□ 0.12
CPNE1-206ENST00000412056 PSEN2P49810 448 aa15.79■□□□□ 0.12
CPNE1-206ENST00000412056 CHMP4BP1P59074 171 aa15.79■□□□□ 0.12
CPNE1-206ENST00000412056 ACTR2P61160 394 aa15.79■□□□□ 0.12
CPNE1-206ENST00000412056 C1orf53Q5VUE5 145 aa15.79■□□□□ 0.12
CPNE1-206ENST00000412056 C7orf61Q8IZ16 206 aa15.79■□□□□ 0.12
CPNE1-206ENST00000412056 SEPT1Q8WYJ6 367 aa15.79■□□□□ 0.12
CPNE1-206ENST00000412056 TBC1D22BQ9NU19 505 aa15.79■□□□□ 0.12
CPNE1-206ENST00000412056 HAS3O00219 553 aa15.78■□□□□ 0.12
CPNE1-206ENST00000412056 EVI5O60447 810 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms