RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 DUSP12Q9UNI6 340 aa8.51□□□□□ -1.05
UBE2F-204ENST00000409953 TMX2Q9Y320 296 aa8.51□□□□□ -1.05
UBE2F-204ENST00000409953 SPTA1P02549 2419 aa8.51□□□□□ -1.05
UBE2F-204ENST00000409953 DMXL2Q8TDJ6 3036 aa8.51□□□□□ -1.05
UBE2F-204ENST00000409953 KRBA1A5PL33 1030 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 USP17L12C9JPN9 530 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 USP17L21D6R901 530 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 GPR37O15354 613 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 TBC1D4O60343 1298 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 ANKRD17O75179 2603 aaKnown RBP8.5□□□□□ -1.05
UBE2F-204ENST00000409953 ALDH1L1O75891 902 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 KRT38O76015 456 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 SPINK2P20155 84 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 PPP4CP60510 307 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 TDGQ13569 410 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 DUSP6Q16828 381 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 TWISTNBQ3B726 338 aaPredicted RBP8.5□□□□□ -1.05
UBE2F-204ENST00000409953 PLEKHG4Q58EX7 1191 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 NAA16Q6N069 864 aaPredicted RBP8.5□□□□□ -1.05
UBE2F-204ENST00000409953 C19orf48Q6RUI8 117 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 PRR23CQ6ZRP0 262 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 ADGRA1Q86SQ6 560 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 GPIHBP1Q8IV16 184 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 GLIS3Q8NEA6 775 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 GATA6Q92908 595 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 NECTIN4Q96NY8 510 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 CDCA3Q99618 268 aaPredicted RBP8.5□□□□□ -1.05
UBE2F-204ENST00000409953 HMG20BQ9P0W2 317 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 FBXO40Q9UH90 709 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 MYH1P12882 1939 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 ADAMTS20P59510 1910 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 RAD50Q92878 1312 aa8.5□□□□□ -1.05
UBE2F-204ENST00000409953 LAMA5O15230 3695 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 KPNA6O60684 536 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 CFHP08603 1231 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 RFX5P48382 616 aaPredicted RBP8.49□□□□□ -1.05
UBE2F-204ENST00000409953 ICA1Q05084 483 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 BTG3Q14201 252 aaPredicted RBP8.49□□□□□ -1.05
UBE2F-204ENST00000409953 CCDC6Q16204 474 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 TRIM71Q2Q1W2 868 aaKnown RBP8.49□□□□□ -1.05
UBE2F-204ENST00000409953 NAALADL2Q58DX5 795 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 FAM83BQ5T0W9 1011 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 LLGL2Q6P1M3 1020 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 TTC6Q86TZ1 520 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 SESTD1Q86VW0 696 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 ZNF454Q8N9F8 522 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 KLHL23Q8NBE8 558 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 ZBTB44Q8NCP5 570 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 MICAL1Q8TDZ2 1067 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 WNT8BQ93098 351 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 TSR2Q969E8 191 aaKnown RBP8.49□□□□□ -1.05
UBE2F-204ENST00000409953 SLF1Q9BQI6 1058 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 WDR11Q9BZH6 1224 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 SRCIN1Q9C0H9 1055 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 RC3H2Q9HBD1 1191 aaKnown RBP8.49□□□□□ -1.05
UBE2F-204ENST00000409953 VTA1Q9NP79 307 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 SEMA4GQ9NTN9 838 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 LRP2BPQ9P2M1 347 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 CA14Q9ULX7 337 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 SIT1Q9Y3P8 196 aa8.49□□□□□ -1.05
UBE2F-204ENST00000409953 RAD21O60216 631 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 LILRB5O75023 590 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 GLULP15104 373 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 HOXB8P17481 243 aaPredicted RBP8.48□□□□□ -1.05
UBE2F-204ENST00000409953 CSTF1Q05048 431 aaKnown RBP8.48□□□□□ -1.05
UBE2F-204ENST00000409953 C19orf57Q0VDD7 668 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 FOXC1Q12948 553 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 PTK7Q13308 1070 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 LPAL2Q16609 132 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 CES5AQ6NT32 575 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 SLC4A10Q6U841 1118 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 TMEM184AQ6ZMB5 413 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 TMEM179Q6ZVK1 233 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 SIAH1Q8IUQ4 282 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 SPATA5Q8NB90 893 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 CHST13Q8NET6 341 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 SEPT8Q92599 483 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 MAP4K1Q92918 833 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 RAVER2Q9HCJ3 691 aaKnown RBP8.48□□□□□ -1.05
UBE2F-204ENST00000409953 CYP26B1Q9NR63 512 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 HOMER2Q9NSB8 354 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 ZSCAN32Q9NX65 697 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 FBXO4Q9UKT5 387 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 COG6Q9Y2V7 657 aa8.48□□□□□ -1.05
UBE2F-204ENST00000409953 AKAP13Q12802 2813 aa8.47□□□□□ -1.05
UBE2F-204ENST00000409953 RSPH10B2B2RC85 870 aa8.47□□□□□ -1.05
UBE2F-204ENST00000409953 ATP2A1O14983 1001 aa8.47□□□□□ -1.05
UBE2F-204ENST00000409953 LAMTOR5O43504 91 aa8.47□□□□□ -1.05
UBE2F-204ENST00000409953 NARSO43776 548 aaKnown RBP8.47□□□□□ -1.05
UBE2F-204ENST00000409953 LRP3O75074 770 aa8.47□□□□□ -1.05
UBE2F-204ENST00000409953 KCNK5O95279 499 aa8.47□□□□□ -1.05
UBE2F-204ENST00000409953 WEE2P0C1S8 567 aa8.47□□□□□ -1.05
UBE2F-204ENST00000409953 RSPH10BP0C881 870 aa8.47□□□□□ -1.05
UBE2F-204ENST00000409953 HOXD8P13378 290 aaPredicted RBP8.47□□□□□ -1.05
UBE2F-204ENST00000409953 PLA2G2AP14555 144 aa8.47□□□□□ -1.05
UBE2F-204ENST00000409953 USP5P45974 858 aa8.47□□□□□ -1.05
UBE2F-204ENST00000409953 DYNLL1P63167 89 aaKnown RBP8.47□□□□□ -1.05
UBE2F-204ENST00000409953 PTGDRQ13258 359 aa8.47□□□□□ -1.05
UBE2F-204ENST00000409953 KCNC3Q14003 757 aa8.47□□□□□ -1.05
UBE2F-204ENST00000409953 PPP4R3BQ5MIZ7 849 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms