RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 PLA2G4DQ86XP0 818 aa22.58■■□□□ 1.2
PDLIM2-207ENST00000409417 FAM184AQ8NB25 1140 aa22.58■■□□□ 1.2
PDLIM2-207ENST00000409417 SLC43A3Q8NBI5 491 aa22.58■■□□□ 1.2
PDLIM2-207ENST00000409417 C8orf76Q96K31 380 aa22.58■■□□□ 1.2
PDLIM2-207ENST00000409417 TOX2Q96NM4 488 aa22.58■■□□□ 1.2
PDLIM2-207ENST00000409417 SEZ6LQ9BYH1 1024 aa22.58■■□□□ 1.2
PDLIM2-207ENST00000409417 NOP56O00567 594 aaKnown RBP22.57■■□□□ 1.2
PDLIM2-207ENST00000409417 EDIL3O43854 480 aa22.57■■□□□ 1.2
PDLIM2-207ENST00000409417 SETQ01105 290 aaPredicted RBP22.57■■□□□ 1.2
PDLIM2-207ENST00000409417 TLE2Q04725 743 aa22.57■■□□□ 1.2
PDLIM2-207ENST00000409417 AGO4Q9HCK5 861 aaKnown RBP22.57■■□□□ 1.2
PDLIM2-207ENST00000409417 PKD2L1Q9P0L9 805 aa22.57■■□□□ 1.2
PDLIM2-207ENST00000409417 GRIN2DO15399 1336 aa22.57■■□□□ 1.2
PDLIM2-207ENST00000409417 FOSBP53539 338 aa22.56■■□□□ 1.2
PDLIM2-207ENST00000409417 PSMC6P62333 389 aa22.56■■□□□ 1.2
PDLIM2-207ENST00000409417 PRR16Q569H4 304 aa22.56■■□□□ 1.2
PDLIM2-207ENST00000409417 GPR20Q99678 358 aa22.56■■□□□ 1.2
PDLIM2-207ENST00000409417 MROH7Q68CQ1 1323 aa22.56■■□□□ 1.2
PDLIM2-207ENST00000409417 MYH7BA7E2Y1 1941 aa22.56■■□□□ 1.2
PDLIM2-207ENST00000409417 ALPK3Q96L96 1907 aa22.56■■□□□ 1.2
PDLIM2-207ENST00000409417 H0YGN5 161 aa22.55■■□□□ 1.2
PDLIM2-207ENST00000409417 PQBP1O60828 265 aaKnown RBP22.55■■□□□ 1.2
PDLIM2-207ENST00000409417 NR5A1Q13285 461 aa22.55■■□□□ 1.2
PDLIM2-207ENST00000409417 INF2Q27J81 1249 aa22.55■■□□□ 1.2
PDLIM2-207ENST00000409417 DIS3L2Q8IYB7 885 aaKnown RBP22.55■■□□□ 1.2
PDLIM2-207ENST00000409417 FBXO18Q8NFZ0 1043 aa22.55■■□□□ 1.2
PDLIM2-207ENST00000409417 KAT2BQ92831 832 aa22.55■■□□□ 1.2
PDLIM2-207ENST00000409417 TNFRSF25Q93038 417 aa22.55■■□□□ 1.2
PDLIM2-207ENST00000409417 LENG9Q96B70 501 aa22.55■■□□□ 1.2
PDLIM2-207ENST00000409417 SDF4Q9BRK5 362 aa22.55■■□□□ 1.2
PDLIM2-207ENST00000409417 JPH1Q9HDC5 661 aaPredicted RBP22.55■■□□□ 1.2
PDLIM2-207ENST00000409417 KIF3AQ9Y496 699 aa22.55■■□□□ 1.2
PDLIM2-207ENST00000409417 NFASCO94856 1347 aa22.55■■□□□ 1.2
PDLIM2-207ENST00000409417 CYP3A7-CYP3A51PA0A087WV96 503 aa22.54■■□□□ 1.2
PDLIM2-207ENST00000409417 DCDC2CA8MYV0 355 aa22.54■■□□□ 1.2
PDLIM2-207ENST00000409417 BTBD18B2RXH4 712 aa22.54■■□□□ 1.2
PDLIM2-207ENST00000409417 CYP3A7P24462 503 aa22.54■■□□□ 1.2
PDLIM2-207ENST00000409417 ITGB3BPQ13352 177 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-207ENST00000409417 SAFBQ15424 915 aaKnown RBP eCLIP22.54■■□□□ 1.2
PDLIM2-207ENST00000409417 MOXD1Q6UVY6 613 aa22.54■■□□□ 1.2
PDLIM2-207ENST00000409417 PIK3AP1Q6ZUJ8 805 aa22.54■■□□□ 1.2
PDLIM2-207ENST00000409417 IPO5O00410 1097 aaKnown RBP22.54■■□□□ 1.2
PDLIM2-207ENST00000409417 F2P00734 622 aa22.54■■□□□ 1.2
PDLIM2-207ENST00000409417 ZNF286BP0CG31 522 aa22.54■■□□□ 1.2
PDLIM2-207ENST00000409417 SP4Q02446 784 aa22.54■■□□□ 1.2
PDLIM2-207ENST00000409417 NBPF20Q3BBV1 942 aa22.54■■□□□ 1.2
PDLIM2-207ENST00000409417 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-207ENST00000409417 SCN10AQ9Y5Y9 1956 aa22.53■■□□□ 1.2
PDLIM2-207ENST00000409417 GUCY1B3Q02153 619 aa22.53■■□□□ 1.2
PDLIM2-207ENST00000409417 CUL4AQ13619 759 aa22.53■■□□□ 1.2
PDLIM2-207ENST00000409417 EARS2Q5JPH6 523 aaKnown RBP22.53■■□□□ 1.2
PDLIM2-207ENST00000409417 NFRKBQ6P4R8 1299 aa22.53■■□□□ 1.2
PDLIM2-207ENST00000409417 NEK8Q86SG6 692 aa22.53■■□□□ 1.2
PDLIM2-207ENST00000409417 ZNF577Q9BSK1 485 aa22.53■■□□□ 1.2
PDLIM2-207ENST00000409417 C16orf70Q9BSU1 422 aa22.53■■□□□ 1.2
PDLIM2-207ENST00000409417 KATNAL1Q9BW62 490 aa22.53■■□□□ 1.2
PDLIM2-207ENST00000409417 SLC9A2Q9UBY0 812 aa22.53■■□□□ 1.2
PDLIM2-207ENST00000409417 TELO2Q9Y4R8 837 aa22.53■■□□□ 1.2
PDLIM2-207ENST00000409417 DHX15O43143 795 aaKnown RBP22.52■■□□□ 1.2
PDLIM2-207ENST00000409417 Q4G0T1 1027 aa22.52■■□□□ 1.2
PDLIM2-207ENST00000409417 PRPF38BQ5VTL8 546 aaKnown RBP22.52■■□□□ 1.2
PDLIM2-207ENST00000409417 FAM126BQ8IXS8 530 aa22.52■■□□□ 1.2
PDLIM2-207ENST00000409417 SEPT1Q8WYJ6 367 aa22.52■■□□□ 1.2
PDLIM2-207ENST00000409417 MBOAT7Q96N66 472 aa22.52■■□□□ 1.2
PDLIM2-207ENST00000409417 TBC1D22BQ9NU19 505 aa22.52■■□□□ 1.2
PDLIM2-207ENST00000409417 ZMYND8Q9ULU4 1186 aaPredicted RBP22.52■■□□□ 1.2
PDLIM2-207ENST00000409417 HAS3O00219 553 aa22.51■■□□□ 1.19
PDLIM2-207ENST00000409417 TDP2O95551 362 aa22.51■■□□□ 1.19
PDLIM2-207ENST00000409417 LGALS2P05162 132 aa22.51■■□□□ 1.19
PDLIM2-207ENST00000409417 CLTBP09497 229 aa22.51■■□□□ 1.19
PDLIM2-207ENST00000409417 FAAP100Q0VG06 881 aa22.51■■□□□ 1.19
PDLIM2-207ENST00000409417 LETM2Q2VYF4 491 aa22.51■■□□□ 1.19
PDLIM2-207ENST00000409417 PPP4R3AQ6IN85 833 aa22.51■■□□□ 1.19
PDLIM2-207ENST00000409417 SNX21Q969T3 373 aa22.51■■□□□ 1.19
PDLIM2-207ENST00000409417 PDLIM7Q9NR12 457 aa22.51■■□□□ 1.19
PDLIM2-207ENST00000409417 PRKAG2Q9UGJ0 569 aa22.51■■□□□ 1.19
PDLIM2-207ENST00000409417 SMC3Q9UQE7 1217 aa22.51■■□□□ 1.19
PDLIM2-207ENST00000409417 GSTTP1A0A1W2PQM5 241 aa22.5■■□□□ 1.19
PDLIM2-207ENST00000409417 GCFC2P16383 781 aaKnown RBP22.5■■□□□ 1.19
PDLIM2-207ENST00000409417 GJB2P29033 226 aa22.5■■□□□ 1.19
PDLIM2-207ENST00000409417 TCF7P36402 384 aaPredicted RBP22.5■■□□□ 1.19
PDLIM2-207ENST00000409417 PSEN2P49810 448 aa22.5■■□□□ 1.19
PDLIM2-207ENST00000409417 CHMP4BP1P59074 171 aa22.5■■□□□ 1.19
PDLIM2-207ENST00000409417 PTPN11Q06124 597 aaPredicted RBP22.5■■□□□ 1.19
PDLIM2-207ENST00000409417 MFSD10Q14728 455 aa22.5■■□□□ 1.19
PDLIM2-207ENST00000409417 KIAA0753Q2KHM9 967 aa22.5■■□□□ 1.19
PDLIM2-207ENST00000409417 NAP1L4Q99733 375 aaKnown RBP22.5■■□□□ 1.19
PDLIM2-207ENST00000409417 FOXP1Q9H334 677 aaPredicted RBP22.5■■□□□ 1.19
PDLIM2-207ENST00000409417 DDX25Q9UHL0 483 aaKnown RBP22.5■■□□□ 1.19
PDLIM2-207ENST00000409417 FAM205CA6NFA0 338 aa22.49■■□□□ 1.19
PDLIM2-207ENST00000409417 H3BRB1 525 aa22.49■■□□□ 1.19
PDLIM2-207ENST00000409417 TLR3O15455 904 aaKnown RBP22.49■■□□□ 1.19
PDLIM2-207ENST00000409417 MSH4O15457 936 aa22.49■■□□□ 1.19
PDLIM2-207ENST00000409417 CD4P01730 458 aa22.49■■□□□ 1.19
PDLIM2-207ENST00000409417 SYN1P17600 705 aa22.49■■□□□ 1.19
PDLIM2-207ENST00000409417 ACTR2P61160 394 aa22.49■■□□□ 1.19
PDLIM2-207ENST00000409417 SESTD1Q86VW0 696 aa22.49■■□□□ 1.19
PDLIM2-207ENST00000409417 UIMC1Q96RL1 719 aa22.49■■□□□ 1.19
PDLIM2-207ENST00000409417 TUT1Q9H6E5 874 aaKnown RBP22.49■■□□□ 1.19
PDLIM2-207ENST00000409417 DOCK5Q9H7D0 1870 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms