RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 COA7Q96BR5 231 aa14.26□□□□□ -0.13
PTPRN-202ENST00000409251 GRIN2DO15399 1336 aa14.26□□□□□ -0.13
PTPRN-202ENST00000409251 PPP1R37O75864 691 aa14.26□□□□□ -0.13
PTPRN-202ENST00000409251 RASA1P20936 1047 aa14.26□□□□□ -0.13
PTPRN-202ENST00000409251 INF2Q27J81 1249 aa14.26□□□□□ -0.13
PTPRN-202ENST00000409251 APTXQ7Z2E3 356 aaKnown RBP14.26□□□□□ -0.13
PTPRN-202ENST00000409251 GSDMAQ96QA5 445 aa14.26□□□□□ -0.13
PTPRN-202ENST00000409251 OSBPL9Q96SU4 736 aa14.26□□□□□ -0.13
PTPRN-202ENST00000409251 NOVA2Q9UNW9 492 aaKnown RBP14.26□□□□□ -0.13
PTPRN-202ENST00000409251 NPR1P16066 1061 aa14.26□□□□□ -0.13
PTPRN-202ENST00000409251 AARSP49588 968 aaKnown RBP eCLIP14.26□□□□□ -0.13
PTPRN-202ENST00000409251 KRT71Q3SY84 523 aa14.26□□□□□ -0.13
PTPRN-202ENST00000409251 SPDL1Q96EA4 605 aa14.26□□□□□ -0.13
PTPRN-202ENST00000409251 TRIM6Q9C030 488 aaPredicted RBP14.26□□□□□ -0.13
PTPRN-202ENST00000409251 SLC39A2Q9NP94 309 aa14.26□□□□□ -0.13
PTPRN-202ENST00000409251 STK32BQ9NY57 414 aa14.26□□□□□ -0.13
PTPRN-202ENST00000409251 MYO1AQ9UBC5 1043 aa14.26□□□□□ -0.13
PTPRN-202ENST00000409251 CICQ96RK0 1608 aaPredicted RBP14.25□□□□□ -0.13
PTPRN-202ENST00000409251 SARSP49591 514 aaKnown RBP14.25□□□□□ -0.13
PTPRN-202ENST00000409251 PDE4DQ08499 809 aa14.25□□□□□ -0.13
PTPRN-202ENST00000409251 SWT1Q5T5J6 900 aaKnown RBP14.25□□□□□ -0.13
PTPRN-202ENST00000409251 TTBK2Q6IQ55 1244 aa14.25□□□□□ -0.13
PTPRN-202ENST00000409251 TMTC3Q6ZXV5 915 aa14.25□□□□□ -0.13
PTPRN-202ENST00000409251 BIN2Q9UBW5 565 aaPredicted RBP14.25□□□□□ -0.13
PTPRN-202ENST00000409251 VIMP08670 466 aaKnown RBP14.25□□□□□ -0.13
PTPRN-202ENST00000409251 MYCBPAPQ8TBZ2 947 aa14.25□□□□□ -0.13
PTPRN-202ENST00000409251 KCNV2Q8TDN2 545 aa14.25□□□□□ -0.13
PTPRN-202ENST00000409251 MASTLQ96GX5 879 aa14.25□□□□□ -0.13
PTPRN-202ENST00000409251 TBC1D7Q9P0N9 293 aa14.25□□□□□ -0.13
PTPRN-202ENST00000409251 ALDH1B1P30837 517 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 TRMT1LQ7Z2T5 733 aaKnown RBP14.24□□□□□ -0.13
PTPRN-202ENST00000409251 PARP9Q8IXQ6 854 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 SP8Q8IXZ3 490 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 TAF4BQ92750 862 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 YIPF3Q9GZM5 350 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 GCOM1H8Y6P7 765 aaPredicted RBP14.24□□□□□ -0.13
PTPRN-202ENST00000409251 PSMD14O00487 310 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 NKRFO15226 690 aaKnown RBP eCLIP14.24□□□□□ -0.13
PTPRN-202ENST00000409251 CEP104O60308 925 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 MYZAPP0CAP1 466 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 NAPAP54920 295 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 CDKAL1Q5VV42 579 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 IFT20Q8IY31 132 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 PIGSQ96S52 555 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 MLXIPLQ9NP71 852 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 RGS17Q9UGC6 210 aaPredicted RBP14.24□□□□□ -0.13
PTPRN-202ENST00000409251 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.24□□□□□ -0.13
PTPRN-202ENST00000409251 C4BP0C0L5 1744 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 MYH8P13535 1937 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 ECE2O60344 883 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 SCG2P13521 617 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 RHBDL3P58872 404 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 SPRED3Q2MJR0 410 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 LETM2Q2VYF4 491 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 WDR59Q6PJI9 974 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 MIGA2Q7L4E1 593 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 AKT1S1Q96B36 256 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 CNOT6LQ96LI5 555 aaKnown RBP14.24□□□□□ -0.13
PTPRN-202ENST00000409251 EXOC1Q9NV70 894 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 SNX12Q9UMY4 172 aa14.24□□□□□ -0.13
PTPRN-202ENST00000409251 TNRC6CQ9HCJ0 1690 aaKnown RBP14.24□□□□□ -0.13
PTPRN-202ENST00000409251 KCNK3O14649 394 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 SLCO1A2P46721 670 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 SLC15A2Q16348 729 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 ACCSLQ4AC99 568 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 CYB5D1Q6P9G0 228 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 CYTH3O43739 400 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 CACNA2D3Q8IZS8 1091 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 TRIM58Q8NG06 486 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 DYDC1Q8WWB3 177 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 DDX20Q9UHI6 824 aaKnown RBP14.23□□□□□ -0.13
PTPRN-202ENST00000409251 HYOU1Q9Y4L1 999 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 FAM205AQ6ZU69 1335 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 CCDC194A0A1B0GVG4 234 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 EPS15P42566 896 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 KIF11P52732 1056 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 LRRC41Q15345 812 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 CDC42EP5Q6NZY7 148 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 CCDC170Q8IYT3 715 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 MIEF2Q96C03 454 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 CYFIP2Q96F07 1278 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 RSRC1Q96IZ7 334 aaKnown RBP14.23□□□□□ -0.13
PTPRN-202ENST00000409251 CRAMP1Q96RY5 1269 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 EPN3Q9H201 632 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 TMEM260Q9NX78 707 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 PCDHA13Q9Y5I0 950 aa14.23□□□□□ -0.13
PTPRN-202ENST00000409251 MARCH6O60337 910 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 CPP00450 1065 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 CRKP46108 304 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 PAK2Q13177 524 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 TEKT1Q969V4 418 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 KIF9Q9HAQ2 790 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 ANAPC4Q9UJX5 808 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 ZNF233A6NK53 670 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 LGR5O75473 907 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 FCER1AP12319 257 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 KIF5BP33176 963 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 RAPGEF1Q13905 1077 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 TRIM14Q14142 442 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 PTGISQ16647 500 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms