RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 RASGRP4Q8TDF6 673 aa20.47■□□□□ 0.87
PDLIM2-206ENST00000409141 KIF2CQ99661 725 aa20.47■□□□□ 0.87
PDLIM2-206ENST00000409141 ALG1Q9BT22 464 aa20.47■□□□□ 0.87
PDLIM2-206ENST00000409141 KATNAL1Q9BW62 490 aa20.47■□□□□ 0.87
PDLIM2-206ENST00000409141 GTF3C3Q9Y5Q9 886 aa20.47■□□□□ 0.87
PDLIM2-206ENST00000409141 CTDNEP1O95476 244 aa20.46■□□□□ 0.87
PDLIM2-206ENST00000409141 KCNA2P16389 499 aa20.46■□□□□ 0.87
PDLIM2-206ENST00000409141 PSEN2P49810 448 aa20.46■□□□□ 0.87
PDLIM2-206ENST00000409141 GTF3C6Q969F1 213 aa20.46■□□□□ 0.87
PDLIM2-206ENST00000409141 GPR20Q99678 358 aa20.46■□□□□ 0.87
PDLIM2-206ENST00000409141 PPP1R12CQ9BZL4 782 aa20.46■□□□□ 0.87
PDLIM2-206ENST00000409141 KCNH7Q9NS40 1196 aa20.46■□□□□ 0.87
PDLIM2-206ENST00000409141 TRMT13Q9NUP7 481 aaKnown RBP20.46■□□□□ 0.87
PDLIM2-206ENST00000409141 PCDHA4Q9UN74 947 aa20.46■□□□□ 0.87
PDLIM2-206ENST00000409141 LIMCH1Q9UPQ0 1083 aa20.46■□□□□ 0.87
PDLIM2-206ENST00000409141 STK36Q9NRP7 1315 aa20.45■□□□□ 0.86
PDLIM2-206ENST00000409141 SCN10AQ9Y5Y9 1956 aa20.45■□□□□ 0.86
PDLIM2-206ENST00000409141 CYP3A4P08684 503 aa20.45■□□□□ 0.86
PDLIM2-206ENST00000409141 MFSD10Q14728 455 aa20.45■□□□□ 0.86
PDLIM2-206ENST00000409141 KIAA0753Q2KHM9 967 aa20.45■□□□□ 0.86
PDLIM2-206ENST00000409141 C7orf31Q8N865 590 aa20.45■□□□□ 0.86
PDLIM2-206ENST00000409141 ORC3Q9UBD5 711 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-206ENST00000409141 MEIS1O00470 390 aa20.44■□□□□ 0.86
PDLIM2-206ENST00000409141 F2P00734 622 aa20.44■□□□□ 0.86
PDLIM2-206ENST00000409141 ARP10275 920 aa20.44■□□□□ 0.86
PDLIM2-206ENST00000409141 XBP1P17861 261 aa20.44■□□□□ 0.86
PDLIM2-206ENST00000409141 FPGSQ05932 587 aa20.44■□□□□ 0.86
PDLIM2-206ENST00000409141 TDHQ8IZJ6 230 aa20.44■□□□□ 0.86
PDLIM2-206ENST00000409141 FAM177A1Q8N128 213 aaPredicted RBP20.44■□□□□ 0.86
PDLIM2-206ENST00000409141 WASF1Q92558 559 aa20.44■□□□□ 0.86
PDLIM2-206ENST00000409141 C16orf70Q9BSU1 422 aa20.44■□□□□ 0.86
PDLIM2-206ENST00000409141 HIPK3Q9H422 1215 aa20.44■□□□□ 0.86
PDLIM2-206ENST00000409141 NOD1Q9Y239 953 aa20.44■□□□□ 0.86
PDLIM2-206ENST00000409141 TELO2Q9Y4R8 837 aa20.44■□□□□ 0.86
PDLIM2-206ENST00000409141 HAS3O00219 553 aa20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 LGALS2P05162 132 aa20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 CYP2C18P33260 490 aa20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 GALNT17Q6IS24 598 aa20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 MFSD5Q6N075 450 aa20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 NIPA1Q7RTP0 329 aa20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 BLIDQ8IZY5 108 aa20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 CRYGNQ8WXF5 182 aa20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 KCNJ14Q9UNX9 436 aa20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 FAM86B1E9PN63 330 aa20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 H3BRB1 525 aa20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 FAM86B2P0C5J1 330 aa20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 CYP2C9P11712 490 aa20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 UTP14CQ5TAP6 766 aaKnown RBP20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 SESTD1Q86VW0 696 aa20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 PLA2G4DQ86XP0 818 aa20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 TMEM199Q8N511 208 aa20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 SEPT1Q8WYJ6 367 aa20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 SDF4Q9BRK5 362 aa20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 NOC4LQ9BVI4 516 aaKnown RBP20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 TUT1Q9H6E5 874 aaKnown RBP20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 AGO4Q9HCK5 861 aaKnown RBP20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 HDAC6Q9UBN7 1215 aa20.43■□□□□ 0.86
PDLIM2-206ENST00000409141 RANBP2P49792 3224 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-206ENST00000409141 FDPSP14324 419 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-206ENST00000409141 TCF7P36402 384 aaPredicted RBP20.42■□□□□ 0.86
PDLIM2-206ENST00000409141 PTGISQ16647 500 aa20.42■□□□□ 0.86
PDLIM2-206ENST00000409141 GDF6Q6KF10 455 aaPredicted RBP20.42■□□□□ 0.86
PDLIM2-206ENST00000409141 DAGLBQ8NCG7 672 aa20.42■□□□□ 0.86
PDLIM2-206ENST00000409141 NSUN7Q8NE18 718 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-206ENST00000409141 PHF20Q9BVI0 1012 aa20.42■□□□□ 0.86
PDLIM2-206ENST00000409141 LTBP2Q14767 1821 aa20.41■□□□□ 0.86
PDLIM2-206ENST00000409141 RABEP1Q15276 862 aa20.41■□□□□ 0.86
PDLIM2-206ENST00000409141 ZSCAN31Q96LW9 406 aaPredicted RBP20.41■□□□□ 0.86
PDLIM2-206ENST00000409141 JPH1Q9HDC5 661 aaPredicted RBP20.41■□□□□ 0.86
PDLIM2-206ENST00000409141 SLC9A2Q9UBY0 812 aa20.41■□□□□ 0.86
PDLIM2-206ENST00000409141 GTF2IRD1Q9UHL9 959 aa20.41■□□□□ 0.86
PDLIM2-206ENST00000409141 NFASCO94856 1347 aa20.4■□□□□ 0.86
PDLIM2-206ENST00000409141 UMODL1Q5DID0 1318 aa20.4■□□□□ 0.86
PDLIM2-206ENST00000409141 IGLV3-22A0A075B6J6 115 aa20.4■□□□□ 0.86
PDLIM2-206ENST00000409141 GSTTP1A0A1W2PQM5 241 aa20.4■□□□□ 0.86
PDLIM2-206ENST00000409141 CSF2RAP15509 400 aa20.4■□□□□ 0.86
PDLIM2-206ENST00000409141 USP11P51784 963 aa20.4■□□□□ 0.86
PDLIM2-206ENST00000409141 CCL23P55773 120 aa20.4■□□□□ 0.86
PDLIM2-206ENST00000409141 ITGB3BPQ13352 177 aaPredicted RBP20.4■□□□□ 0.86
PDLIM2-206ENST00000409141 NPY5RQ15761 445 aa20.4■□□□□ 0.86
PDLIM2-206ENST00000409141 PRR16Q569H4 304 aa20.4■□□□□ 0.86
PDLIM2-206ENST00000409141 TRIM50Q86XT4 487 aa20.4■□□□□ 0.86
PDLIM2-206ENST00000409141 TBCKQ8TEA7 893 aa20.4■□□□□ 0.86
PDLIM2-206ENST00000409141 GJB4Q9NTQ9 266 aa20.4■□□□□ 0.86
PDLIM2-206ENST00000409141 ZNF215Q9UL58 517 aaPredicted RBP20.4■□□□□ 0.86
PDLIM2-206ENST00000409141 DOCK5Q9H7D0 1870 aa20.4■□□□□ 0.86
PDLIM2-206ENST00000409141 M0R2N6 131 aa20.39■□□□□ 0.85
PDLIM2-206ENST00000409141 JAK2O60674 1132 aa20.39■□□□□ 0.85
PDLIM2-206ENST00000409141 CIITAP33076 1130 aa20.39■□□□□ 0.85
PDLIM2-206ENST00000409141 EPHB4P54760 987 aa20.39■□□□□ 0.85
PDLIM2-206ENST00000409141 PPIGQ13427 754 aaKnown RBP eCLIP20.39■□□□□ 0.851e-8■■■□□ 18.4
PDLIM2-206ENST00000409141 SHHQ15465 462 aa20.39■□□□□ 0.85
PDLIM2-206ENST00000409141 CCDC83Q8IWF9 413 aa20.39■□□□□ 0.85
PDLIM2-206ENST00000409141 UIMC1Q96RL1 719 aa20.39■□□□□ 0.85
PDLIM2-206ENST00000409141 FXR1P51114 621 aaKnown RBP eCLIP20.38■□□□□ 0.85
PDLIM2-206ENST00000409141 SETQ01105 290 aaPredicted RBP20.38■□□□□ 0.85
PDLIM2-206ENST00000409141 ST3GAL1Q11201 340 aa20.38■□□□□ 0.85
PDLIM2-206ENST00000409141 C9orf50Q5SZB4 431 aa20.38■□□□□ 0.85
PDLIM2-206ENST00000409141 RETREG2Q8NC44 543 aa20.38■□□□□ 0.85
PDLIM2-206ENST00000409141 GLG1Q92896 1179 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms