RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 PRSS33Q8NF86 280 aa10.66□□□□□ -0.7
NIF3L1-203ENST00000409129 EMID1Q96A84 441 aaPredicted RBP10.66□□□□□ -0.7
NIF3L1-203ENST00000409129 MTMR8Q96EF0 704 aa10.66□□□□□ -0.7
NIF3L1-203ENST00000409129 MAP3K20Q9NYL2 800 aaKnown RBP10.66□□□□□ -0.7
NIF3L1-203ENST00000409129 MAD2L2Q9UI95 211 aa10.66□□□□□ -0.7
NIF3L1-203ENST00000409129 MTUS1Q9ULD2 1270 aa10.66□□□□□ -0.7
NIF3L1-203ENST00000409129 MRVI1Q9Y6F6 885 aa10.66□□□□□ -0.7
NIF3L1-203ENST00000409129 PALM3A6NDB9 673 aaPredicted RBP10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 ZBTB5O15062 677 aa10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 DCXO43602 365 aa10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 PPP1R11O60927 126 aaPredicted RBP10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 PARNO95453 639 aaKnown RBP10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 ALADP13716 330 aa10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 KCNJ6P48051 423 aa10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 PSEN2P49810 448 aa10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 RBL2Q08999 1139 aa10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 PTCRAQ6ISU1 281 aaPredicted RBP10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 KCNV1Q6PIU1 500 aa10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 STOX1Q6ZVD7 989 aa10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 CYB5R4Q7L1T6 521 aa10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 LRRC8DQ7L1W4 858 aa10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 SAMD3Q8N6K7 520 aa10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 PPTC7Q8NI37 304 aa10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 DHX38Q92620 1227 aaKnown RBP10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 YTHDC1Q96MU7 727 aaKnown RBP10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 PDCD2LQ9BRP1 358 aa10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 ALG1Q9BT22 464 aa10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 KATNAL1Q9BW62 490 aa10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 IL25Q9H293 177 aa10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 HDAC6Q9UBN7 1215 aa10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 GTF2IRD1Q9UHL9 959 aa10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 PCDHA1Q9Y5I3 950 aa10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 PTPRZ1P23471 2315 aaPredicted RBP10.65□□□□□ -0.7
NIF3L1-203ENST00000409129 LAMA4Q16363 1823 aa10.65□□□□□ -0.71
NIF3L1-203ENST00000409129 MICAL3Q7RTP6 2002 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 CACNA1HO95180 2353 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 POTEB3A0JP26 581 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 HAS3O00219 553 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 PPFIA4O75335 1185 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 RGS20O76081 388 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 F2P00734 622 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 CXCL10P02778 98 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 CKBP12277 381 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 MYCLP12524 364 aaPredicted RBP10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 HOXA13P31271 388 aaPredicted RBP10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 TRDNQ13061 729 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 TRAF1Q13077 416 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 PTK7Q13308 1070 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 MFSD10Q14728 455 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 KIAA0753Q2KHM9 967 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 LEXMQ3ZCV2 418 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 IER5LQ5T953 404 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 MYSM1Q5VVJ2 828 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 POTEBQ6S5H4 581 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 VSIG10LQ86VR7 867 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 FAM86C1Q9NVL1 165 aa10.64□□□□□ -0.71
NIF3L1-203ENST00000409129 CACNA1BQ00975 2339 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 H3BQ06 376 aaPredicted RBP10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 GCOM1H8Y6P7 765 aaPredicted RBP10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 ST18O60284 1047 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 NBNO60934 754 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 POLR2MP0CAP2 368 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 ZNF286BP0CG31 522 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 TGFB3P10600 412 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 HOXD8P13378 290 aaPredicted RBP10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 PDE4AP27815 886 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 WDR5P61964 334 aaKnown RBP10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 SP2Q02086 613 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 GRM4Q14833 912 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 PGM5Q15124 567 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 SLC35G1Q2M3R5 365 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 TRIM71Q2Q1W2 868 aaKnown RBP10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 CELF3Q5SZQ8 465 aaKnown RBP10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 TTC22Q5TAA0 569 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 CNKSR3Q6P9H4 555 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 MAMSTRQ6ZN01 415 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 SPATA33Q96N06 139 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 PIGSQ96S52 555 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 ZBED2Q9BTP6 218 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 KCNH6Q9H252 994 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 RIOX1Q9H6W3 641 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 DMDP11532 3685 aa10.63□□□□□ -0.71
NIF3L1-203ENST00000409129 KIAA1217Q5T5P2 1943 aa10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 ABHD14A-ACY1A0A1B0GW23 586 aa10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 ERICH2A1L162 156 aa10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 GRXCR2A6NFK2 248 aa10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 IFIT3O14879 490 aaKnown RBP10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 ATMINO43313 823 aaPredicted RBP10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 SORBS3O60504 671 aa10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 GGPS1O95749 300 aa10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 CYP21A2P08686 494 aa10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 GSPT1P15170 499 aaKnown RBP10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 CCND2P30279 289 aa10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 ZNF200P98182 395 aaPredicted RBP10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 PTH1RQ03431 593 aa10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 IKBKEQ14164 716 aa10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 TCTN1Q2MV58 587 aa10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 HSDL1Q3SXM5 330 aa10.62□□□□□ -0.71
NIF3L1-203ENST00000409129 ZNF618Q5T7W0 954 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms