RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 CRLF3Q8IUI8 442 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 MLXIPQ9HAP2 919 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 NCOA5Q9HCD5 579 aaKnown RBP6.58□□□□□ -1.36
SCN1A-203ENST00000409050 VPS54Q9P1Q0 977 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 SLC8A2Q9UPR5 921 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 SATB2Q9UPW6 733 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 CSADQ9Y600 493 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 TJP3O95049 919 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 APOA4P06727 396 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 COPB2P35606 906 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 CCT5P48643 541 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 THOC5Q13769 683 aaKnown RBP6.58□□□□□ -1.36
SCN1A-203ENST00000409050 TCP11Q8WWU5 503 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 UIMC1Q96RL1 719 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 ZMYND12Q9H0C1 365 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 KANSL2Q9H9L4 492 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 OLFML3Q9NRN5 406 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 CCNL1Q9UK58 526 aaPredicted RBP6.58□□□□□ -1.36
SCN1A-203ENST00000409050 ASAP2O43150 1006 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 CTNND1O60716 968 aaKnown RBP6.58□□□□□ -1.36
SCN1A-203ENST00000409050 TMCC1O94876 653 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 CFBP00751 764 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 ESRRAP11474 423 aaPredicted RBP6.58□□□□□ -1.36
SCN1A-203ENST00000409050 HARSP12081 509 aaKnown RBP6.58□□□□□ -1.36
SCN1A-203ENST00000409050 RXRAP19793 462 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 CA8P35219 290 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 TNFAIP2Q03169 654 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 MYO1EQ12965 1108 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 CHRNA2Q15822 529 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 CLEC17AQ6ZS10 378 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 SLC35F6Q8N357 371 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 LINC00301Q8NCQ3 95 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 C3orf20Q8ND61 904 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 SYMPKQ92797 1274 aaKnown RBP6.58□□□□□ -1.36
SCN1A-203ENST00000409050 MED10Q9BTT4 135 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 GOLGA8IPA6NC78 632 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 ERVV-1B6SEH8 477 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 GNGT2O14610 69 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 GNPATO15228 680 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 ARHGEF9O43307 516 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 CCDC22O60826 627 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 SRGAP2CP0DJJ0 459 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 ARL4CP56559 192 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 ART3Q13508 389 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 FAM102BQ5T8I3 360 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 RFX6Q8HWS3 928 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 GLG1Q92896 1179 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 KLC2Q9H0B6 622 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 CEP72Q9P209 647 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 SUN2Q9UH99 717 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 TEKT2Q9UIF3 430 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 TTC37Q6PGP7 1564 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 MLH3Q9UHC1 1453 aa6.58□□□□□ -1.36
SCN1A-203ENST00000409050 GSTA4O15217 222 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 CTIFO43310 598 aaKnown RBP6.57□□□□□ -1.36
SCN1A-203ENST00000409050 TAF5LO75529 589 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 CALB1P05937 261 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 MCF2P10911 925 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 LIG3P49916 1009 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 IFRD2Q12894 506 aaPredicted RBP6.57□□□□□ -1.36
SCN1A-203ENST00000409050 OTUD7BQ6GQQ9 843 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 DNAJC24Q6P3W2 148 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 RNF207Q6ZRF8 634 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 ARHGAP27Q6ZUM4 889 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 TRMT1LQ7Z2T5 733 aaKnown RBP6.57□□□□□ -1.36
SCN1A-203ENST00000409050 DGKHQ86XP1 1220 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 SLC7A3Q8WY07 619 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 CNPY3Q9BT09 278 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 OSBPL5Q9H0X9 879 aaPredicted RBP6.57□□□□□ -1.36
SCN1A-203ENST00000409050 PSMD3O43242 534 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 NDUFA10O95299 355 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 MMP1P03956 469 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 CHGBP05060 677 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 ZFXP17010 805 aaPredicted RBP6.57□□□□□ -1.36
SCN1A-203ENST00000409050 CA4P22748 312 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 NR2F2P24468 414 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 PSMD7P51665 324 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 JAK3P52333 1124 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 PTGDRQ13258 359 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 RCSD1Q6JBY9 416 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 C4orf22Q6V702 233 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 ACAD11Q709F0 780 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 ANO5Q75V66 913 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 SCYL3Q8IZE3 742 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 SYT2Q8N9I0 419 aaPredicted RBP6.57□□□□□ -1.36
SCN1A-203ENST00000409050 FBXL13Q8NEE6 735 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 ZNF653Q96CK0 615 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 USP40Q9NVE5 1235 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 DDX56Q9NY93 547 aaKnown RBP6.57□□□□□ -1.36
SCN1A-203ENST00000409050 SEPT10Q9P0V9 454 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 PCDHA5Q9Y5H7 936 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 A0A1W2PQC6 194 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 MYCNP04198 464 aaPredicted RBP6.57□□□□□ -1.36
SCN1A-203ENST00000409050 KRT4P19013 534 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 EEF1DP29692 281 aaKnown RBP6.57□□□□□ -1.36
SCN1A-203ENST00000409050 ATP6V1E1P36543 226 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 CYP2J2P51589 502 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 POLGP54098 1239 aaPredicted RBP6.57□□□□□ -1.36
SCN1A-203ENST00000409050 DR1Q01658 176 aa6.57□□□□□ -1.36
SCN1A-203ENST00000409050 KIF22Q14807 665 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms