RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 PCDHA4Q9UN74 947 aa18.02■□□□□ 0.48
CDK11B-204ENST00000407249 GAKO14976 1311 aa18.02■□□□□ 0.48
CDK11B-204ENST00000407249 USP17L8P0C7I0 530 aa18.02■□□□□ 0.47
CDK11B-204ENST00000407249 PRLRP16471 622 aa18.02■□□□□ 0.47
CDK11B-204ENST00000407249 SNX1Q13596 522 aa18.02■□□□□ 0.47
CDK11B-204ENST00000407249 SPA17Q15506 151 aa18.02■□□□□ 0.47
CDK11B-204ENST00000407249 FAM47AQ5JRC9 791 aa18.02■□□□□ 0.47
CDK11B-204ENST00000407249 KRT26Q7Z3Y9 468 aa18.02■□□□□ 0.47
CDK11B-204ENST00000407249 RASGRP4Q8TDF6 673 aa18.02■□□□□ 0.47
CDK11B-204ENST00000407249 SMCR8Q8TEV9 937 aaPredicted RBP18.02■□□□□ 0.47
CDK11B-204ENST00000407249 P2RX5Q93086 422 aa18.02■□□□□ 0.47
CDK11B-204ENST00000407249 CNOT6LQ96LI5 555 aaKnown RBP18.02■□□□□ 0.47
CDK11B-204ENST00000407249 ERGIC2Q96RQ1 377 aa18.02■□□□□ 0.47
CDK11B-204ENST00000407249 SH3GL2Q99962 352 aa18.02■□□□□ 0.47
CDK11B-204ENST00000407249 CAPN6Q9Y6Q1 641 aa18.02■□□□□ 0.47
CDK11B-204ENST00000407249 CCNE1P24864 410 aa18.01■□□□□ 0.47
CDK11B-204ENST00000407249 PDE6BP35913 854 aa18.01■□□□□ 0.47
CDK11B-204ENST00000407249 CCT5P48643 541 aa18.01■□□□□ 0.47
CDK11B-204ENST00000407249 ANKRD40Q6AI12 368 aa18.01■□□□□ 0.47
CDK11B-204ENST00000407249 SPATA4Q8NEY3 305 aa18.01■□□□□ 0.47
CDK11B-204ENST00000407249 CAPS2Q9BXY5 557 aa18.01■□□□□ 0.47
CDK11B-204ENST00000407249 IQCGQ9H095 443 aaKnown RBP18.01■□□□□ 0.47
CDK11B-204ENST00000407249 POLLQ9UGP5 575 aa18.01■□□□□ 0.47
CDK11B-204ENST00000407249 BICDL2A1A5D9 508 aa18.01■□□□□ 0.47
CDK11B-204ENST00000407249 M0R2N6 131 aa18.01■□□□□ 0.47
CDK11B-204ENST00000407249 ERLIN2O94905 339 aa18.01■□□□□ 0.47
CDK11B-204ENST00000407249 PYGLP06737 847 aa18.01■□□□□ 0.47
CDK11B-204ENST00000407249 PLEKP08567 350 aaPredicted RBP18.01■□□□□ 0.47
CDK11B-204ENST00000407249 BTDP43251 543 aa18.01■□□□□ 0.47
CDK11B-204ENST00000407249 GNAQP50148 359 aa18.01■□□□□ 0.47
CDK11B-204ENST00000407249 DIXDC1Q155Q3 683 aa18.01■□□□□ 0.47
CDK11B-204ENST00000407249 GPKOWQ92917 476 aaPredicted RBP eCLIP18.01■□□□□ 0.47
CDK11B-204ENST00000407249 RRP36Q96EU6 259 aaKnown RBP18.01■□□□□ 0.47
CDK11B-204ENST00000407249 PCMTD1Q96MG8 357 aaPredicted RBP18.01■□□□□ 0.47
CDK11B-204ENST00000407249 NOC4LQ9BVI4 516 aaKnown RBP18.01■□□□□ 0.47
CDK11B-204ENST00000407249 SH3GLB2Q9NR46 395 aa18.01■□□□□ 0.47
CDK11B-204ENST00000407249 PLAGL2Q9UPG8 496 aa18.01■□□□□ 0.47
CDK11B-204ENST00000407249 TACC1O75410 805 aa18■□□□□ 0.47
CDK11B-204ENST00000407249 HNRNPH3P31942 346 aaKnown RBP18■□□□□ 0.47
CDK11B-204ENST00000407249 FAM114A1Q8IWE2 563 aa18■□□□□ 0.47
CDK11B-204ENST00000407249 PARD3BQ8TEW8 1205 aa18■□□□□ 0.47
CDK11B-204ENST00000407249 GPR101Q96P66 508 aaPredicted RBP18■□□□□ 0.47
CDK11B-204ENST00000407249 IFIH1Q9BYX4 1025 aaKnown RBP18■□□□□ 0.47
CDK11B-204ENST00000407249 SH2D4AQ9H788 454 aa18■□□□□ 0.47
CDK11B-204ENST00000407249 MKNK2Q9HBH9 465 aa18■□□□□ 0.47
CDK11B-204ENST00000407249 QSER1Q2KHR3 1735 aa18■□□□□ 0.47
CDK11B-204ENST00000407249 C6orf229H3BNL8 230 aa18■□□□□ 0.47
CDK11B-204ENST00000407249 EBAG9O00559 213 aa18■□□□□ 0.47
CDK11B-204ENST00000407249 ZSCAN9O15535 394 aaPredicted RBP18■□□□□ 0.47
CDK11B-204ENST00000407249 USO1O60763 962 aaKnown RBP18■□□□□ 0.47
CDK11B-204ENST00000407249 MFSD14BQ5SR56 506 aa18■□□□□ 0.47
CDK11B-204ENST00000407249 YIPF2Q9BWQ6 316 aa18■□□□□ 0.47
CDK11B-204ENST00000407249 EHD4Q9H223 541 aa18■□□□□ 0.47
CDK11B-204ENST00000407249 GRIN2DO15399 1336 aa18■□□□□ 0.47
CDK11B-204ENST00000407249 CDK5RAP2Q96SN8 1893 aa17.99■□□□□ 0.47
CDK11B-204ENST00000407249 CCDC194A0A1B0GVG4 234 aa17.99■□□□□ 0.47
CDK11B-204ENST00000407249 GOLGA8KD6RF30 607 aa17.99■□□□□ 0.47
CDK11B-204ENST00000407249 EIF3HO15372 352 aaKnown RBP eCLIP17.99■□□□□ 0.47
CDK11B-204ENST00000407249 MTIF2P46199 727 aaKnown RBP17.99■□□□□ 0.47
CDK11B-204ENST00000407249 RAB27AP51159 221 aa17.99■□□□□ 0.47
CDK11B-204ENST00000407249 TFAP4Q01664 338 aa17.99■□□□□ 0.47
CDK11B-204ENST00000407249 CCDC15Q0P6D6 951 aa17.99■□□□□ 0.47
CDK11B-204ENST00000407249 STK4Q13043 487 aa17.99■□□□□ 0.47
CDK11B-204ENST00000407249 RCSD1Q6JBY9 416 aa17.99■□□□□ 0.47
CDK11B-204ENST00000407249 TYW1BQ6NUM6 668 aa17.99■□□□□ 0.47
CDK11B-204ENST00000407249 C3orf20Q8ND61 904 aa17.99■□□□□ 0.47
CDK11B-204ENST00000407249 PCDHA13Q9Y5I0 950 aa17.99■□□□□ 0.47
CDK11B-204ENST00000407249 NKRFO15226 690 aaKnown RBP eCLIP17.99■□□□□ 0.47
CDK11B-204ENST00000407249 GRIK5Q16478 980 aa17.99■□□□□ 0.47
CDK11B-204ENST00000407249 ZNF444Q8N0Y2 327 aaPredicted RBP17.99■□□□□ 0.47
CDK11B-204ENST00000407249 BCAS4Q8TDM0 211 aa17.99■□□□□ 0.47
CDK11B-204ENST00000407249 TGFBRAP1Q8WUH2 860 aa17.99■□□□□ 0.47
CDK11B-204ENST00000407249 ARHGAP20Q9P2F6 1191 aa17.99■□□□□ 0.47
CDK11B-204ENST00000407249 EPB41P11171 864 aaKnown RBP17.98■□□□□ 0.47
CDK11B-204ENST00000407249 GCKP35557 465 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 SLC51AQ86UW1 340 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 COL23A1Q86Y22 540 aaPredicted RBP17.98■□□□□ 0.47
CDK11B-204ENST00000407249 IQCDQ96DY2 449 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 AGAP3Q96P47 875 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 OSBPL9Q96SU4 736 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 TRIM9Q9C026 710 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 CUEDC2Q9H467 287 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 MLXIPQ9HAP2 919 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 KIF9Q9HAQ2 790 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 FAM169AQ9Y6X4 670 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 OPA1O60313 960 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 APBA3O96018 575 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 TCP1P17987 556 aaKnown RBP17.98■□□□□ 0.47
CDK11B-204ENST00000407249 EPHB4P54760 987 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 PDE4DQ08499 809 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 FKBP15Q5T1M5 1219 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 EMBQ6PCB8 327 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 MAGEF1Q9HAY2 307 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 PCDHA6Q9UN73 950 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 PCDHA8Q9Y5H6 950 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 FOCADQ5VW36 1801 aa17.98■□□□□ 0.47
CDK11B-204ENST00000407249 LAD1O00515 517 aa17.97■□□□□ 0.47
CDK11B-204ENST00000407249 MOCS3O95396 460 aa17.97■□□□□ 0.47
CDK11B-204ENST00000407249 SLC7A5Q01650 507 aa17.97■□□□□ 0.47
CDK11B-204ENST00000407249 GRM4Q14833 912 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms