RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 MSCO60682 206 aa9.48□□□□□ -0.89
GPC3-203ENST00000406757 FOSP01100 380 aaPredicted RBP9.48□□□□□ -0.89
GPC3-203ENST00000406757 CYBAP13498 195 aa9.48□□□□□ -0.89
GPC3-203ENST00000406757 MARCKSP29966 332 aaPredicted RBP9.48□□□□□ -0.89
GPC3-203ENST00000406757 COPB2P35606 906 aa9.48□□□□□ -0.89
GPC3-203ENST00000406757 ZNF76P36508 570 aa9.48□□□□□ -0.89
GPC3-203ENST00000406757 RTP1P59025 263 aa9.48□□□□□ -0.89
GPC3-203ENST00000406757 GHRHRQ02643 423 aa9.48□□□□□ -0.89
GPC3-203ENST00000406757 AP3B2Q13367 1082 aa9.48□□□□□ -0.89
GPC3-203ENST00000406757 PGM5Q15124 567 aa9.48□□□□□ -0.89
GPC3-203ENST00000406757 EEPD1Q7L9B9 569 aa9.48□□□□□ -0.89
GPC3-203ENST00000406757 NEK8Q86SG6 692 aa9.48□□□□□ -0.89
GPC3-203ENST00000406757 EFCAB3Q8N7B9 438 aa9.48□□□□□ -0.89
GPC3-203ENST00000406757 FAM133AQ8N9E0 248 aa9.48□□□□□ -0.89
GPC3-203ENST00000406757 FGD4Q96M96 766 aa9.48□□□□□ -0.89
GPC3-203ENST00000406757 FAM161BQ96MY7 647 aa9.48□□□□□ -0.89
GPC3-203ENST00000406757 PDCD2LQ9BRP1 358 aa9.48□□□□□ -0.89
GPC3-203ENST00000406757 TMEM60Q9H2L4 133 aa9.48□□□□□ -0.89
GPC3-203ENST00000406757 PKD2L1Q9P0L9 805 aa9.48□□□□□ -0.89
GPC3-203ENST00000406757 ATP11BQ9Y2G3 1177 aa9.48□□□□□ -0.89
GPC3-203ENST00000406757 ZNFX1Q9P2E3 1918 aaKnown RBP9.48□□□□□ -0.89
GPC3-203ENST00000406757 MYH7BA7E2Y1 1941 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 LCTP09848 1927 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 DNAJC25-GNG10A0A024R161 153 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.47□□□□□ -0.89
GPC3-203ENST00000406757 FAM86B1E9PN63 330 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 SORBS3O60504 671 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 IGHA2P01877 340 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 NR3C2P08235 984 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 FAM86B2P0C5J1 330 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 ARP10275 920 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 SREBF1P36956 1147 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 ALDH5A1P51649 535 aaPredicted RBP9.47□□□□□ -0.89
GPC3-203ENST00000406757 KRT85P78386 507 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 MRPS9P82933 396 aaKnown RBP9.47□□□□□ -0.89
GPC3-203ENST00000406757 STK38Q15208 465 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 PTPAQ15257 358 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 ZNF792Q3KQV3 632 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 PRR16Q569H4 304 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 RILPL1Q5EBL4 403 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 PRAMEF19Q5SWL8 479 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 NSUN6Q8TEA1 469 aaKnown RBP9.47□□□□□ -0.89
GPC3-203ENST00000406757 GUCD1Q96NT3 240 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 EHMT1Q9H9B1 1298 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.47□□□□□ -0.89
GPC3-203ENST00000406757 MAP3K20Q9NYL2 800 aaKnown RBP9.47□□□□□ -0.89
GPC3-203ENST00000406757 PRKAG2Q9UGJ0 569 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 ATP6V1DQ9Y5K8 247 aa9.47□□□□□ -0.89
GPC3-203ENST00000406757 TCHHQ07283 1943 aa9.46□□□□□ -0.89
GPC3-203ENST00000406757 MYH15Q9Y2K3 1946 aa9.46□□□□□ -0.89
GPC3-203ENST00000406757 KBTBD13C9JR72 458 aa9.46□□□□□ -0.9
GPC3-203ENST00000406757 STRNO43815 780 aa9.46□□□□□ -0.9
GPC3-203ENST00000406757 GADD45BO75293 160 aaPredicted RBP9.46□□□□□ -0.9
GPC3-203ENST00000406757 PRPF40AO75400 957 aaKnown RBP9.46□□□□□ -0.9
GPC3-203ENST00000406757 CYP3A4P08684 503 aa9.46□□□□□ -0.9
GPC3-203ENST00000406757 ITGB5P18084 799 aa9.46□□□□□ -0.9
GPC3-203ENST00000406757 USP11P51784 963 aa9.46□□□□□ -0.9
GPC3-203ENST00000406757 GRIN1Q05586 938 aa9.46□□□□□ -0.9
GPC3-203ENST00000406757 PTGDRQ13258 359 aa9.46□□□□□ -0.9
GPC3-203ENST00000406757 OLFML2BQ68BL8 750 aa9.46□□□□□ -0.9
GPC3-203ENST00000406757 SLC39A5Q6ZMH5 540 aa9.46□□□□□ -0.9
GPC3-203ENST00000406757 SEPT14Q6ZU15 432 aa9.46□□□□□ -0.9
GPC3-203ENST00000406757 PLA2G4DQ86XP0 818 aa9.46□□□□□ -0.9
GPC3-203ENST00000406757 SAMD3Q8N6K7 520 aa9.46□□□□□ -0.9
GPC3-203ENST00000406757 C4orf32Q8N8J7 132 aa9.46□□□□□ -0.9
GPC3-203ENST00000406757 LINC00301Q8NCQ3 95 aa9.46□□□□□ -0.9
GPC3-203ENST00000406757 ARRDC4Q8NCT1 418 aa9.46□□□□□ -0.9
GPC3-203ENST00000406757 LEO1Q8WVC0 666 aaPredicted RBP9.46□□□□□ -0.9
GPC3-203ENST00000406757 CRYGNQ8WXF5 182 aa9.46□□□□□ -0.9
GPC3-203ENST00000406757 SPATA32Q96LK8 384 aa9.46□□□□□ -0.9
GPC3-203ENST00000406757 CLIC6Q96NY7 704 aa9.46□□□□□ -0.9
GPC3-203ENST00000406757 WDR11Q9BZH6 1224 aa9.46□□□□□ -0.9
GPC3-203ENST00000406757 PRDM5Q9NQX1 630 aaPredicted RBP9.46□□□□□ -0.9
GPC3-203ENST00000406757 DDX25Q9UHL0 483 aaKnown RBP9.46□□□□□ -0.9
GPC3-203ENST00000406757 SPTLC2O15270 562 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 SEPT4O43236 478 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 MARCH6O60337 910 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 PTGS1P23219 599 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 CCND2P30279 289 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 ADCYAP1R1P41586 468 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 TXKP42681 527 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 TRAPPC10P48553 1259 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 NASPP49321 788 aaPredicted RBP9.45□□□□□ -0.9
GPC3-203ENST00000406757 PDE4DQ08499 809 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 SLC39A14Q15043 492 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 SHHQ15465 462 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 IL17AQ16552 155 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 TRIM60Q495X7 471 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 SPECC1Q5M775 1068 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 C9orf50Q5SZB4 431 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 TMEM63BQ5T3F8 832 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 PCNX4Q63HM2 1172 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 MCTP2Q6DN12 878 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.45□□□□□ -0.96e-7■■■■■ 29.2
GPC3-203ENST00000406757 VSIG10LQ86VR7 867 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 FERMT2Q96AC1 680 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 MAML3Q96JK9 1138 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 MXRA8Q9BRK3 442 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 BCAS3Q9H6U6 928 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 RCOR1Q9UKL0 485 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms