RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 SYT2Q8N9I0 419 aaPredicted RBP27.43■■□□□ 1.98
DNMT3A-206ENST00000406659 AS3MTQ9HBK9 375 aa27.43■■□□□ 1.98
DNMT3A-206ENST00000406659 PICK1Q9NRD5 415 aa27.43■■□□□ 1.98
DNMT3A-206ENST00000406659 EMILIN3Q9NT22 766 aa27.43■■□□□ 1.98
DNMT3A-206ENST00000406659 PITPNM2Q9BZ72 1349 aa27.42■■□□□ 1.98
DNMT3A-206ENST00000406659 ALAS1P13196 640 aa27.42■■□□□ 1.98
DNMT3A-206ENST00000406659 PSMC6P62333 389 aa27.42■■□□□ 1.98
DNMT3A-206ENST00000406659 SPP2Q13103 211 aa27.42■■□□□ 1.98
DNMT3A-206ENST00000406659 PABPC4Q13310 644 aaKnown RBP eCLIP27.42■■□□□ 1.98
DNMT3A-206ENST00000406659 HERC4Q5GLZ8 1057 aaPredicted RBP27.42■■□□□ 1.98
DNMT3A-206ENST00000406659 REXO1L1PQ8IX06 675 aa27.42■■□□□ 1.98
DNMT3A-206ENST00000406659 TRPM4Q8TD43 1214 aa27.42■■□□□ 1.98
DNMT3A-206ENST00000406659 RPAP3Q9H6T3 665 aaPredicted RBP27.42■■□□□ 1.98
DNMT3A-206ENST00000406659 SLC38A10Q9HBR0 1119 aa27.42■■□□□ 1.98
DNMT3A-206ENST00000406659 RAVER2Q9HCJ3 691 aaKnown RBP27.42■■□□□ 1.98
DNMT3A-206ENST00000406659 GPRC5DQ9NZD1 345 aa27.42■■□□□ 1.98
DNMT3A-206ENST00000406659 PPP1R9AQ9ULJ8 1098 aa27.42■■□□□ 1.98
DNMT3A-206ENST00000406659 B4DLN1 442 aa27.41■■□□□ 1.98
DNMT3A-206ENST00000406659 EML1O00423 815 aa27.41■■□□□ 1.98
DNMT3A-206ENST00000406659 ZBED4O75132 1171 aa27.41■■□□□ 1.98
DNMT3A-206ENST00000406659 PSMD10O75832 226 aa27.41■■□□□ 1.98
DNMT3A-206ENST00000406659 SETQ01105 290 aaPredicted RBP27.41■■□□□ 1.98
DNMT3A-206ENST00000406659 CYP4A11Q02928 519 aa27.41■■□□□ 1.98
DNMT3A-206ENST00000406659 ARSHQ5FYA8 562 aa27.41■■□□□ 1.98
DNMT3A-206ENST00000406659 FOXR2Q6PJQ5 311 aa27.41■■□□□ 1.98
DNMT3A-206ENST00000406659 OTOP1Q7RTM1 612 aa27.41■■□□□ 1.98
DNMT3A-206ENST00000406659 KCTD17Q8N5Z5 321 aa27.41■■□□□ 1.98
DNMT3A-206ENST00000406659 CLEC4DQ8WXI8 215 aa27.41■■□□□ 1.98
DNMT3A-206ENST00000406659 WRNIP1Q96S55 665 aa27.41■■□□□ 1.98
DNMT3A-206ENST00000406659 NOC4LQ9BVI4 516 aaKnown RBP27.41■■□□□ 1.98
DNMT3A-206ENST00000406659 GAS7O60861 476 aa27.4■■□□□ 1.98
DNMT3A-206ENST00000406659 RAD51AP2Q09MP3 1159 aa27.4■■□□□ 1.98
DNMT3A-206ENST00000406659 PPP2R5CQ13362 524 aa27.4■■□□□ 1.98
DNMT3A-206ENST00000406659 PRAMEF18Q5VWM3 479 aa27.4■■□□□ 1.98
DNMT3A-206ENST00000406659 TOGARAM2Q6ZUX3 1019 aa27.4■■□□□ 1.98
DNMT3A-206ENST00000406659 GLIS3Q8NEA6 775 aa27.4■■□□□ 1.98
DNMT3A-206ENST00000406659 ZNF577Q9BSK1 485 aa27.4■■□□□ 1.98
DNMT3A-206ENST00000406659 TBC1D7Q9P0N9 293 aa27.4■■□□□ 1.98
DNMT3A-206ENST00000406659 PNMA2Q9UL42 364 aa27.4■■□□□ 1.98
DNMT3A-206ENST00000406659 GOLGA6L9A6NEM1 432 aa27.4■■□□□ 1.98
DNMT3A-206ENST00000406659 NFIBO00712 420 aa27.4■■□□□ 1.98
DNMT3A-206ENST00000406659 CACNB1Q02641 598 aaPredicted RBP27.4■■□□□ 1.98
DNMT3A-206ENST00000406659 TBC1D8BQ0IIM8 1120 aa27.4■■□□□ 1.98
DNMT3A-206ENST00000406659 GPC2Q8N158 579 aa27.4■■□□□ 1.98
DNMT3A-206ENST00000406659 ZKSCAN4Q969J2 545 aaPredicted RBP27.4■■□□□ 1.98
DNMT3A-206ENST00000406659 ZHX3Q9H4I2 956 aa27.4■■□□□ 1.98
DNMT3A-206ENST00000406659 TUFT1Q9NNX1 390 aa27.4■■□□□ 1.98
DNMT3A-206ENST00000406659 DOCK1Q14185 1865 aa27.39■■□□□ 1.98
DNMT3A-206ENST00000406659 SOWAHDA6NJG2 315 aa27.39■■□□□ 1.98
DNMT3A-206ENST00000406659 KIF20AO95235 890 aa27.39■■□□□ 1.98
DNMT3A-206ENST00000406659 LMNB1P20700 586 aa27.39■■□□□ 1.98
DNMT3A-206ENST00000406659 KRT26Q7Z3Y9 468 aa27.39■■□□□ 1.98
DNMT3A-206ENST00000406659 UPF1Q92900 1129 aaKnown RBP eCLIP27.39■■□□□ 1.98
DNMT3A-206ENST00000406659 MXRA8Q9BRK3 442 aa27.39■■□□□ 1.98
DNMT3A-206ENST00000406659 RGL1Q9NZL6 768 aa27.39■■□□□ 1.98
DNMT3A-206ENST00000406659 EYA4O95677 639 aa27.38■■□□□ 1.97
DNMT3A-206ENST00000406659 FDX1P10109 184 aa27.38■■□□□ 1.97
DNMT3A-206ENST00000406659 KRT9P35527 623 aa27.38■■□□□ 1.97
DNMT3A-206ENST00000406659 BACE1P56817 501 aa27.38■■□□□ 1.97
DNMT3A-206ENST00000406659 ZNF280CQ8ND82 737 aa27.38■■□□□ 1.97
DNMT3A-206ENST00000406659 ZFP91Q96JP5 570 aaPredicted RBP27.38■■□□□ 1.97
DNMT3A-206ENST00000406659 WDR11Q9BZH6 1224 aa27.38■■□□□ 1.97
DNMT3A-206ENST00000406659 ABHD10Q9NUJ1 306 aa27.38■■□□□ 1.97
DNMT3A-206ENST00000406659 GGA3Q9NZ52 723 aa27.38■■□□□ 1.97
DNMT3A-206ENST00000406659 PCDHA2Q9Y5H9 948 aa27.38■■□□□ 1.97
DNMT3A-206ENST00000406659 FRMD3A2A2Y4 597 aa27.37■■□□□ 1.97
DNMT3A-206ENST00000406659 CHMP2AO43633 222 aa27.37■■□□□ 1.97
DNMT3A-206ENST00000406659 ARP10275 920 aa27.37■■□□□ 1.97
DNMT3A-206ENST00000406659 PTPRAP18433 802 aa27.37■■□□□ 1.97
DNMT3A-206ENST00000406659 FECHP22830 423 aa27.37■■□□□ 1.97
DNMT3A-206ENST00000406659 GIT2Q14161 759 aa27.37■■□□□ 1.97
DNMT3A-206ENST00000406659 FKBP15Q5T1M5 1219 aa27.37■■□□□ 1.97
DNMT3A-206ENST00000406659 SYT10Q6XYQ8 523 aa27.37■■□□□ 1.97
DNMT3A-206ENST00000406659 TMTC1Q8IUR5 882 aa27.37■■□□□ 1.97
DNMT3A-206ENST00000406659 SAMD3Q8N6K7 520 aa27.37■■□□□ 1.97
DNMT3A-206ENST00000406659 HSD17B14Q9BPX1 270 aa27.37■■□□□ 1.97
DNMT3A-206ENST00000406659 HOMER2Q9NSB8 354 aa27.37■■□□□ 1.97
DNMT3A-206ENST00000406659 RPTORQ8N122 1335 aa27.37■■□□□ 1.97
DNMT3A-206ENST00000406659 DYDC2Q96IM9 177 aa27.37■■□□□ 1.97
DNMT3A-206ENST00000406659 TEKT3Q9BXF9 490 aa27.37■■□□□ 1.97
DNMT3A-206ENST00000406659 MAP3K20Q9NYL2 800 aaKnown RBP27.37■■□□□ 1.97
DNMT3A-206ENST00000406659 COL20A1Q9P218 1284 aa27.37■■□□□ 1.97
DNMT3A-206ENST00000406659 PPP2R3BQ9Y5P8 575 aa27.37■■□□□ 1.97
DNMT3A-206ENST00000406659 RNF225M0QZC1 329 aaPredicted RBP27.36■■□□□ 1.97
DNMT3A-206ENST00000406659 ETF1P62495 437 aaKnown RBP27.36■■□□□ 1.97
DNMT3A-206ENST00000406659 GHRHRQ02643 423 aa27.36■■□□□ 1.97
DNMT3A-206ENST00000406659 CTTNQ14247 550 aaKnown RBP27.36■■□□□ 1.97
DNMT3A-206ENST00000406659 MTF1Q14872 753 aa27.36■■□□□ 1.97
DNMT3A-206ENST00000406659 MUM1L1Q5H9M0 696 aa27.36■■□□□ 1.97
DNMT3A-206ENST00000406659 MIIPQ5JXC2 388 aa27.36■■□□□ 1.97
DNMT3A-206ENST00000406659 SLC30A10Q6XR72 485 aa27.36■■□□□ 1.97
DNMT3A-206ENST00000406659 TPH2Q8IWU9 490 aa27.36■■□□□ 1.97
DNMT3A-206ENST00000406659 NUP58Q9BVL2 599 aa27.36■■□□□ 1.97
DNMT3A-206ENST00000406659 BHMT2Q9H2M3 363 aa27.36■■□□□ 1.97
DNMT3A-206ENST00000406659 LUC7L2Q9Y383 392 aaKnown RBP27.36■■□□□ 1.97
DNMT3A-206ENST00000406659 CCDC175P0C221 793 aa27.35■■□□□ 1.97
DNMT3A-206ENST00000406659 CYP26C1Q6V0L0 522 aa27.35■■□□□ 1.97
DNMT3A-206ENST00000406659 RAD9BQ6WBX8 426 aa27.35■■□□□ 1.97
DNMT3A-206ENST00000406659 DESI2Q9BSY9 194 aa27.35■■□□□ 1.97
DNMT3A-206ENST00000406659 CAPN11Q9UMQ6 739 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms