RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 TRIM59Q8IWR1 403 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 PBKQ96KB5 322 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 KRT82Q9NSB4 513 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 FIS1Q9Y3D6 152 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 MYL1P05976 194 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 CDC25BP30305 580 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 ANGPTL8Q6UXH0 198 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 FAM186BQ8IYM0 893 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 CFAP36Q96G28 342 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 ZSWIM6Q9HCJ5 1215 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 CHRNDQ07001 517 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 TMED2Q15363 201 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 ARMC9Q7Z3E5 817 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 BANK1Q8NDB2 785 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 ATP10AO60312 1499 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 PFDN1O60925 122 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 ELF1P32519 619 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 IFNA8P32881 189 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 UHMK1Q8TAS1 419 aaKnown RBP13□□□□□ -0.33
SMCR8-201ENST00000406438 PARVGQ9HBI0 331 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 LEMD3Q9Y2U8 911 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 NUP153P49790 1475 aaKnown RBP13□□□□□ -0.33
SMCR8-201ENST00000406438 A0A0D9SFI3 127 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 TOM1L1O75674 476 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 SYF2O95926 243 aaKnown RBP13□□□□□ -0.33
SMCR8-201ENST00000406438 DYNLT1P63172 113 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 BASP1P80723 227 aaKnown RBP13□□□□□ -0.33
SMCR8-201ENST00000406438 KCTD16Q68DU8 428 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 FBXO41Q8TF61 875 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 RPF1Q9H9Y2 349 aaKnown RBP13□□□□□ -0.33
SMCR8-201ENST00000406438 ADD1P35611 737 aaKnown RBP13□□□□□ -0.33
SMCR8-201ENST00000406438 IFT88Q13099 833 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 CEP19Q96LK0 163 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 KDM5CP41229 1560 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 ECEL1O95672 775 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 CNOT10Q9H9A5 744 aaKnown RBP13□□□□□ -0.33
SMCR8-201ENST00000406438 TBX22Q9Y458 520 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 ZNF496Q96IT1 587 aaPredicted RBP13□□□□□ -0.33
SMCR8-201ENST00000406438 ATP8A1Q9Y2Q0 1164 aa13□□□□□ -0.33
SMCR8-201ENST00000406438 PGRMC1O00264 195 aaKnown RBP12.99□□□□□ -0.33
SMCR8-201ENST00000406438 PPP6R2O75170 966 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 KRT1P04264 644 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 NCF2P19878 526 aaPredicted RBP12.99□□□□□ -0.33
SMCR8-201ENST00000406438 OCRLQ01968 901 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 TTC19Q6DKK2 380 aaPredicted RBP12.99□□□□□ -0.33
SMCR8-201ENST00000406438 CEP170P1Q96L14 293 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 CLIC4Q9Y696 253 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 HOXA7P31268 230 aaPredicted RBP12.99□□□□□ -0.33
SMCR8-201ENST00000406438 IFNAR2P48551 515 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 EIF4A1P60842 406 aaKnown RBP12.99□□□□□ -0.33
SMCR8-201ENST00000406438 FKBP3Q00688 224 aaKnown RBP12.99□□□□□ -0.33
SMCR8-201ENST00000406438 SEPT2Q15019 361 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 TTC30BQ8N4P2 665 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 RABGGTAQ92696 567 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 CLIC6Q96NY7 704 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 FMO2Q99518 471 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 RNF219Q5W0B1 726 aaPredicted RBP12.99□□□□□ -0.33
SMCR8-201ENST00000406438 SPOPLQ6IQ16 392 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 GSDMAQ96QA5 445 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 USP28Q96RU2 1077 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 UPF3AQ9H1J1 476 aaKnown RBP12.99□□□□□ -0.33
SMCR8-201ENST00000406438 NUMA1Q14980 2115 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 FAM95CA0A1B0GW59 222 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 GOLGA8FQ08AF8 430 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 GOLGA8DPQ0D2H9 430 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 TAF11Q15544 211 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 KIF19Q2TAC6 998 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 CYP4F22Q6NT55 531 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 GDAP1Q8TB36 358 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 PIP4K2CQ8TBX8 421 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 BCL2L12Q9HB09 334 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 PDE11AQ9HCR9 933 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 UBE2TQ9NPD8 197 aaPredicted RBP12.99□□□□□ -0.33
SMCR8-201ENST00000406438 YWHAHQ04917 246 aaPredicted RBP12.99□□□□□ -0.33
SMCR8-201ENST00000406438 TBCCQ15814 346 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 ELMOD1Q8N336 334 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 LZICQ8WZA0 190 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 MMTAG2Q9BU76 263 aaKnown RBP12.99□□□□□ -0.33
SMCR8-201ENST00000406438 HPCAL4Q9UM19 191 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 FNDC3AQ9Y2H6 1198 aaKnown RBP12.99□□□□□ -0.33
SMCR8-201ENST00000406438 BICRAQ9NZM4 1560 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 MAP3K15Q6ZN16 1313 aa12.99□□□□□ -0.33
SMCR8-201ENST00000406438 BTBD18B2RXH4 712 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 EEF1DP29692 281 aaKnown RBP12.98□□□□□ -0.33
SMCR8-201ENST00000406438 EPHB4P54760 987 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 SCRN1Q12765 414 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 SZRD1Q7Z422 152 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 EEF2KMTQ96G04 330 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 LAMC1P11047 1609 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 CLASP1Q7Z460 1538 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 KRT80Q6KB66 452 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 TRIM67Q6ZTA4 783 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 ORAI2Q96SN7 254 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 RNF26Q9BY78 433 aaPredicted RBP12.98□□□□□ -0.33
SMCR8-201ENST00000406438 EPB41L5Q9HCM4 733 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 SLAIN2Q9P270 581 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 MID2Q9UJV3 735 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 ACBD5Q5T8D3 534 aaPredicted RBP12.98□□□□□ -0.33
SMCR8-201ENST00000406438 ABCF3Q9NUQ8 709 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 EXOC1LA0A1B0GW35 172 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms