RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 PLA2G4DQ86XP0 818 aa23.59■■□□□ 1.37
TPM1-208ENST00000404484 RIOX2Q8IUF8 465 aa23.59■■□□□ 1.37
TPM1-208ENST00000404484 ERMNQ8TAM6 284 aa23.59■■□□□ 1.37
TPM1-208ENST00000404484 RAET1EQ8TD07 263 aa23.59■■□□□ 1.37
TPM1-208ENST00000404484 SNX29Q8TEQ0 813 aa23.59■■□□□ 1.37
TPM1-208ENST00000404484 DNAJC25Q9H1X3 360 aa23.59■■□□□ 1.37
TPM1-208ENST00000404484 STK17AQ9UEE5 414 aa23.59■■□□□ 1.37
TPM1-208ENST00000404484 GJD2Q9UKL4 321 aa23.59■■□□□ 1.37
TPM1-208ENST00000404484 POTEMA6NI47 508 aa23.58■■□□□ 1.37
TPM1-208ENST00000404484 GTPBP6O43824 516 aaPredicted RBP23.58■■□□□ 1.37
TPM1-208ENST00000404484 BAATQ14032 418 aaPredicted RBP23.58■■□□□ 1.37
TPM1-208ENST00000404484 MMTAG2Q9BU76 263 aaKnown RBP23.58■■□□□ 1.37
TPM1-208ENST00000404484 MEIS1O00470 390 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 MSH4O15457 936 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 PLCG1P19174 1290 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 AFMP43652 599 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 SLC9C1Q4G0N8 1177 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 HAUS3Q68CZ6 603 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 SPATA20Q8TB22 786 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 SH3TC2Q8TF17 1288 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 ARMC5Q96C12 935 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 RMDN3Q96TC7 470 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 MXRA8Q9BRK3 442 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 SPATC1LQ9H0A9 340 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 NT5C3AQ9H0P0 336 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 KIAA0100Q14667 2235 aaKnown RBP23.57■■□□□ 1.36
TPM1-208ENST00000404484 PRR29P0C7W0 189 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 MAPK4P31152 587 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 SARSP49591 514 aaKnown RBP23.57■■□□□ 1.36
TPM1-208ENST00000404484 UBXN2AP68543 259 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 ARHGEF16Q5VV41 709 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 GSDMAQ96QA5 445 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 PXMP2Q9NR77 195 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 DACH1Q9UI36 760 aa23.57■■□□□ 1.36
TPM1-208ENST00000404484 PFASO15067 1338 aa23.56■■□□□ 1.36
TPM1-208ENST00000404484 BIN1O00499 593 aa23.56■■□□□ 1.36
TPM1-208ENST00000404484 SLC25A27O95847 323 aa23.56■■□□□ 1.36
TPM1-208ENST00000404484 CCNA1P78396 465 aa23.56■■□□□ 1.36
TPM1-208ENST00000404484 AMPD3Q01432 767 aa23.56■■□□□ 1.36
TPM1-208ENST00000404484 DPYDQ12882 1025 aa23.56■■□□□ 1.36
TPM1-208ENST00000404484 SEMA3FQ13275 785 aa23.56■■□□□ 1.36
TPM1-208ENST00000404484 NAALADL2Q58DX5 795 aa23.56■■□□□ 1.36
TPM1-208ENST00000404484 GRAMD1CQ8IYS0 662 aa23.56■■□□□ 1.36
TPM1-208ENST00000404484 SLC5A5Q92911 643 aa23.56■■□□□ 1.36
TPM1-208ENST00000404484 TAAR1Q96RJ0 339 aa23.56■■□□□ 1.36
TPM1-208ENST00000404484 BPIFA3Q9BQP9 254 aa23.56■■□□□ 1.36
TPM1-208ENST00000404484 CBX8Q9HC52 389 aa23.56■■□□□ 1.36
TPM1-208ENST00000404484 CYP39A1Q9NYL5 469 aa23.56■■□□□ 1.36
TPM1-208ENST00000404484 PGM5Q15124 567 aa23.55■■□□□ 1.36
TPM1-208ENST00000404484 HYIQ5T013 277 aa23.55■■□□□ 1.36
TPM1-208ENST00000404484 GPR142Q7Z601 462 aa23.55■■□□□ 1.36
TPM1-208ENST00000404484 CYP2W1Q8TAV3 490 aa23.55■■□□□ 1.36
TPM1-208ENST00000404484 NSUN6Q8TEA1 469 aaKnown RBP23.55■■□□□ 1.36
TPM1-208ENST00000404484 PDCD2LQ9BRP1 358 aa23.55■■□□□ 1.36
TPM1-208ENST00000404484 MOV10L1Q9BXT6 1211 aaKnown RBP23.55■■□□□ 1.36
TPM1-208ENST00000404484 WDR11Q9BZH6 1224 aa23.55■■□□□ 1.36
TPM1-208ENST00000404484 A1CFQ9NQ94 594 aaKnown RBP23.55■■□□□ 1.36
TPM1-208ENST00000404484 KBTBD4Q9NVX7 518 aa23.55■■□□□ 1.36
TPM1-208ENST00000404484 RMND1Q9NWS8 449 aa23.55■■□□□ 1.36
TPM1-208ENST00000404484 MAN1B1Q9UKM7 699 aa23.55■■□□□ 1.36
TPM1-208ENST00000404484 EIF2AK2P19525 551 aaKnown RBP23.54■■□□□ 1.36
TPM1-208ENST00000404484 CCND2P30279 289 aa23.54■■□□□ 1.36
TPM1-208ENST00000404484 GRK4P32298 578 aa23.54■■□□□ 1.36
TPM1-208ENST00000404484 GRB10Q13322 594 aa23.54■■□□□ 1.36
TPM1-208ENST00000404484 IRF5Q13568 498 aa23.54■■□□□ 1.36
TPM1-208ENST00000404484 DPCR1Q3MIW9 517 aa23.54■■□□□ 1.36
TPM1-208ENST00000404484 TMEM119Q4V9L6 283 aa23.54■■□□□ 1.36
TPM1-208ENST00000404484 LRCH2Q5VUJ6 765 aa23.54■■□□□ 1.36
TPM1-208ENST00000404484 C11orf57Q6ZUT1 292 aaPredicted RBP23.54■■□□□ 1.36
TPM1-208ENST00000404484 ZNF333Q96JL9 665 aa23.54■■□□□ 1.36
TPM1-208ENST00000404484 LRRC27Q9C0I9 530 aa23.54■■□□□ 1.36
TPM1-208ENST00000404484 UBIAD1Q9Y5Z9 338 aa23.54■■□□□ 1.36
TPM1-208ENST00000404484 ADCY3O60266 1144 aa23.53■■□□□ 1.36
TPM1-208ENST00000404484 CCT6AP40227 531 aaKnown RBP23.53■■□□□ 1.36
TPM1-208ENST00000404484 SPIRE1Q08AE8 756 aa23.53■■□□□ 1.36
TPM1-208ENST00000404484 PLEKHH3Q7Z736 793 aa23.53■■□□□ 1.36
TPM1-208ENST00000404484 KCTD17Q8N5Z5 321 aa23.53■■□□□ 1.36
TPM1-208ENST00000404484 RIT2Q99578 217 aa23.53■■□□□ 1.36
TPM1-208ENST00000404484 ZNF577Q9BSK1 485 aa23.53■■□□□ 1.36
TPM1-208ENST00000404484 JADE2Q9NQC1 790 aa23.53■■□□□ 1.36
TPM1-208ENST00000404484 VAV3Q9UKW4 847 aa23.53■■□□□ 1.36
TPM1-208ENST00000404484 BECN2A8MW95 431 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 GAS7O60861 476 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 STAM2O75886 525 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 SOX10P56693 466 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 MORC3Q14149 939 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 NCAPH2Q6IBW4 605 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.52■■□□□ 1.36
TPM1-208ENST00000404484 ANKRD35Q8N283 1001 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 MLKLQ8NB16 471 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 IL31RAQ8NI17 732 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 GJA10Q969M2 543 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 PNMA5Q96PV4 448 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 PLIN2Q99541 437 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 GOLGA6L19H0YKK7 550 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 PSMD10O75832 226 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 MYCP01106 439 aaPredicted RBP23.52■■□□□ 1.36
TPM1-208ENST00000404484 ELNP15502 786 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 PPP2R5CQ13362 524 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 CT47A1Q5JQC4 288 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms