RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 TRIM59Q8IWR1 403 aa11.84□□□□□ -0.51
CLIP4-204ENST00000404424 HDAC7Q8WUI4 952 aa11.84□□□□□ -0.51
CLIP4-204ENST00000404424 GPCPD1Q9NPB8 672 aa11.84□□□□□ -0.51
CLIP4-204ENST00000404424 DAGLAQ9Y4D2 1042 aa11.84□□□□□ -0.51
CLIP4-204ENST00000404424 MYH10P35580 1976 aa11.84□□□□□ -0.51
CLIP4-204ENST00000404424 ZBTB5O15062 677 aa11.84□□□□□ -0.51
CLIP4-204ENST00000404424 NAP1L1P55209 391 aaKnown RBP11.84□□□□□ -0.51
CLIP4-204ENST00000404424 NAB2Q15742 525 aa11.84□□□□□ -0.51
CLIP4-204ENST00000404424 SLC18A3Q16572 532 aa11.84□□□□□ -0.51
CLIP4-204ENST00000404424 ZC3H3Q8IXZ2 948 aaKnown RBP11.84□□□□□ -0.51
CLIP4-204ENST00000404424 GLIS3Q8NEA6 775 aa11.84□□□□□ -0.51
CLIP4-204ENST00000404424 NLRC4Q9NPP4 1024 aa11.84□□□□□ -0.51
CLIP4-204ENST00000404424 AIPL1Q9NZN9 384 aa11.84□□□□□ -0.51
CLIP4-204ENST00000404424 PCDHA2Q9Y5H9 948 aa11.84□□□□□ -0.51
CLIP4-204ENST00000404424 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLIP4-204ENST00000404424 TLR2O60603 784 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 ADRA2BP18089 450 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 CXCR5P32302 372 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 MATR3P43243 847 aaKnown RBP eCLIP11.83□□□□□ -0.52
CLIP4-204ENST00000404424 ATP2B2Q01814 1243 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 UBE2SQ16763 222 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 EDRF1Q3B7T1 1238 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 FOXR1Q6PIV2 292 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 DPP8Q6V1X1 898 aaPredicted RBP11.83□□□□□ -0.52
CLIP4-204ENST00000404424 IFT20Q8IY31 132 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 C10orf67Q8IYJ2 551 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 RUFY1Q96T51 708 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 LSM14BQ9BX40 385 aaKnown RBP11.83□□□□□ -0.52
CLIP4-204ENST00000404424 PSTPIP2Q9H939 334 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 RSPH14Q9UHP6 348 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 ATF5Q9Y2D1 282 aaPredicted RBP11.83□□□□□ -0.52
CLIP4-204ENST00000404424 PITPNM2Q9BZ72 1349 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 BUB1O43683 1085 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 HSF2BPO75031 334 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 PLA2G4BP0C869 781 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 USP11P51784 963 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 POLR2FP61218 127 aaKnown RBP11.83□□□□□ -0.52
CLIP4-204ENST00000404424 C10orf76Q5T2E6 689 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 ANKRD13CQ8N6S4 541 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 TBC1D16Q8TBP0 767 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 RBM12Q9NTZ6 932 aaKnown RBP11.83□□□□□ -0.52
CLIP4-204ENST00000404424 SERPINB13Q9UIV8 391 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 PCDHGC5Q9Y5F6 944 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 TAF1LQ8IZX4 1826 aa11.83□□□□□ -0.52
CLIP4-204ENST00000404424 FRMD3A2A2Y4 597 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 BTNL10A8MVZ5 291 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 NCK2O43639 380 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 PPP1R11O60927 126 aaPredicted RBP11.82□□□□□ -0.52
CLIP4-204ENST00000404424 SLC7A5Q01650 507 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 APBA1Q02410 837 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 PICALMQ13492 652 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 DNAJC21Q5F1R6 531 aaKnown RBP11.82□□□□□ -0.52
CLIP4-204ENST00000404424 PSMB7Q99436 277 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 FAM107BQ9H098 131 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 KCTD10Q9H3F6 313 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 GDF3Q9NR23 364 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 EMILIN3Q9NT22 766 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 POLLQ9UGP5 575 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 KIAA1024Q9UPX6 916 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 CES2O00748 559 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 TRIM66O15016 1216 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 CETN3O15182 167 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 PALMO75781 387 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 SSBP05455 408 aaKnown RBP eCLIP11.82□□□□□ -0.52
CLIP4-204ENST00000404424 ERCC3P19447 782 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 MAGEA9P43362 315 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 EIF6P56537 245 aaKnown RBP11.82□□□□□ -0.52
CLIP4-204ENST00000404424 HERC4Q5GLZ8 1057 aaPredicted RBP11.82□□□□□ -0.52
CLIP4-204ENST00000404424 MEI1Q5TIA1 1274 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 MOXD1Q6UVY6 613 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 SLFN12Q8IYM2 578 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 TBC1D5Q92609 795 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 CAPS2Q9BXY5 557 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 KCNMB3Q9NPA1 279 aa11.82□□□□□ -0.52
CLIP4-204ENST00000404424 CYP3A7-CYP3A51PA0A087WV96 503 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 E9PMD0 336 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 CYP11B2P19099 503 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 CYP3A7P24462 503 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 HOXA10P31260 410 aaPredicted RBP11.81□□□□□ -0.52
CLIP4-204ENST00000404424 EPS15P42566 896 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 CORO7P57737 925 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 KLHL30Q0D2K2 578 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 PAK2Q13177 524 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 ADAM9Q13443 819 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 FAM196AQ6ZSG2 479 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 TMC4Q7Z404 712 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 GPBP1Q86WP2 473 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 SCFD1Q8WVM8 642 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 STK24Q9Y6E0 443 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 BZW2Q9Y6E2 419 aaKnown RBP11.81□□□□□ -0.52
CLIP4-204ENST00000404424 ATAD5Q96QE3 1844 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 LY75O60449 1722 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 KLRC1P26715 233 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 IRAK1P51617 712 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 RAPGEF1Q13905 1077 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 ASIC2Q16515 512 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 MCTP2Q6DN12 878 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 TTBK2Q6IQ55 1244 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.81□□□□□ -0.52
CLIP4-204ENST00000404424 MBOAT7Q96N66 472 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms