RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 LACTBP83111 547 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 CYP4F8P98187 520 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 IRF9Q00978 393 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 SPIRE1Q08AE8 756 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 SEC23AQ15436 765 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 GPR19Q15760 415 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 HABP4Q5JVS0 413 aaKnown RBP5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 RNF219Q5W0B1 726 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 IQSEC1Q6DN90 963 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 SLC23A3Q6PIS1 610 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 ANKLE2Q86XL3 938 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 CMIPQ8IY22 773 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 BCAS3Q9H6U6 928 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 PDLIM7Q9NR12 457 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 ACSL6Q9UKU0 697 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 TRHDEQ9UKU6 1024 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 APOBEC2Q9Y235 224 aaKnown RBP5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 TELO2Q9Y4R8 837 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 HCFC2Q9Y5Z7 792 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 ZC3H12DA2A288 527 aaKnown RBP5.31□□□□□ -1.56
HMGB1P17-201ENST00000403495 ALDH1L1O75891 902 aa5.31□□□□□ -1.56
HMGB1P17-201ENST00000403495 HPXP02790 462 aa5.31□□□□□ -1.56
HMGB1P17-201ENST00000403495 PMLP29590 882 aa5.31□□□□□ -1.56
HMGB1P17-201ENST00000403495 LSSP48449 732 aa5.31□□□□□ -1.56
HMGB1P17-201ENST00000403495 CHRNEQ04844 493 aa5.31□□□□□ -1.56
HMGB1P17-201ENST00000403495 STEAP3Q658P3 488 aa5.31□□□□□ -1.56
HMGB1P17-201ENST00000403495 NLRX1Q86UT6 975 aa5.31□□□□□ -1.56
HMGB1P17-201ENST00000403495 KIF18BQ86Y91 864 aa5.31□□□□□ -1.56
HMGB1P17-201ENST00000403495 SPPL2CQ8IUH8 684 aa5.31□□□□□ -1.56
HMGB1P17-201ENST00000403495 NOSTRINQ8IVI9 506 aa5.31□□□□□ -1.56
HMGB1P17-201ENST00000403495 OXR1Q8N573 874 aa5.31□□□□□ -1.56
HMGB1P17-201ENST00000403495 CLRN3Q8NCR9 226 aa5.31□□□□□ -1.56
HMGB1P17-201ENST00000403495 SHISA4Q96DD7 197 aa5.31□□□□□ -1.56
HMGB1P17-201ENST00000403495 YIPF4Q9BSR8 244 aa5.31□□□□□ -1.56
HMGB1P17-201ENST00000403495 METTL14Q9HCE5 456 aaKnown RBP5.31□□□□□ -1.56
HMGB1P17-201ENST00000403495 PCMTD2Q9NV79 361 aa5.31□□□□□ -1.56
HMGB1P17-201ENST00000403495 DSEQ9UL01 958 aa5.31□□□□□ -1.56
HMGB1P17-201ENST00000403495 FITM1A5D6W6 292 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 H7C1D1 291 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 SGSM2O43147 1006 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 ZEB2O60315 1214 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 GLI4P10075 376 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 PTX3P26022 381 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 KIF11P52732 1056 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 CORO7P57737 925 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 GRIN1Q05586 938 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 TMEM132BQ14DG7 1078 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 LRRC41Q15345 812 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 TTF1Q15361 905 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 ABCB5Q2M3G0 1257 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 ZNF792Q3KQV3 632 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 MROH9Q5TGP6 573 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 BROXQ5VW32 411 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 FYB2Q5VWT5 728 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 OTOP1Q7RTM1 612 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 NECAB2Q7Z6G3 386 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 KIAA1958Q8N8K9 716 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 NLGN2Q8NFZ4 835 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 MYLIPQ8WY64 445 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 ELF4Q99607 663 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 BOCQ9BWV1 1114 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 RNF32Q9H0A6 362 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 RC3H2Q9HBD1 1191 aaKnown RBP5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 SLC6A20Q9NP91 592 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 TOMM22Q9NS69 142 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 ADGRE2Q9UHX3 823 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 SRPK3Q9UPE1 567 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 CTNND2Q9UQB3 1225 aa5.3□□□□□ -1.56
HMGB1P17-201ENST00000403495 FAM90A27PA6NNH2 459 aa5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 NUDT19A8MXV4 375 aa5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 GABRDO14764 452 aa5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 MT-CO1P00395 513 aa5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 GDNFP39905 211 aa5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 IARSP41252 1262 aaKnown RBP5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 TUSC3Q13454 348 aa5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 DDB1Q16531 1140 aa5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 HHIPL2Q6UWX4 724 aa5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 EP400NLQ6ZTU2 488 aa5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 C11orf74Q86VG3 221 aa5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 RIOX2Q8IUF8 465 aa5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 FMNL3Q8IVF7 1028 aa5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 UHMK1Q8TAS1 419 aaKnown RBP5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 CLEC4DQ8WXI8 215 aa5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 SLC5A5Q92911 643 aa5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 TSR2Q969E8 191 aaKnown RBP5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 CHPF2Q9P2E5 772 aa5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 MYOTQ9UBF9 498 aa5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 PALD1Q9ULE6 856 aa5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 PLA2G2DQ9UNK4 145 aa5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 EID1Q9Y6B2 187 aa5.29□□□□□ -1.56
HMGB1P17-201ENST00000403495 TNKSO95271 1327 aa5.28□□□□□ -1.56
HMGB1P17-201ENST00000403495 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P17-201ENST00000403495 WNT11O96014 354 aa5.28□□□□□ -1.56
HMGB1P17-201ENST00000403495 DBHP09172 617 aa5.28□□□□□ -1.56
HMGB1P17-201ENST00000403495 TMEM253P0C7T8 217 aa5.28□□□□□ -1.56
HMGB1P17-201ENST00000403495 ARHGAP44Q17R89 818 aa5.28□□□□□ -1.56
HMGB1P17-201ENST00000403495 ESRP1Q6NXG1 681 aaKnown RBP5.28□□□□□ -1.56
HMGB1P17-201ENST00000403495 KCTD1Q719H9 257 aa5.28□□□□□ -1.56
HMGB1P17-201ENST00000403495 ABI1Q8IZP0 508 aa5.28□□□□□ -1.56
HMGB1P17-201ENST00000403495 ARRDC4Q8NCT1 418 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms