RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 STIM2Q9P246 746 aa21.92■■□□□ 1.1
CCDC47-202ENST00000403162 MTMR7Q9Y216 660 aa21.92■■□□□ 1.1
CCDC47-202ENST00000403162 MYMKA6NI61 221 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 LRRC53A6NM62 1247 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 EPB41P11171 864 aaKnown RBP21.91■■□□□ 1.1
CCDC47-202ENST00000403162 BTDP43251 543 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 PPP4CP60510 307 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 ASTE1Q2TB18 679 aaPredicted RBP21.91■■□□□ 1.1
CCDC47-202ENST00000403162 HAUS3Q68CZ6 603 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 RSBN1LQ6PCB5 846 aaPredicted RBP21.91■■□□□ 1.1
CCDC47-202ENST00000403162 PPM1EQ8WY54 764 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 RRP36Q96EU6 259 aaKnown RBP21.91■■□□□ 1.1
CCDC47-202ENST00000403162 FAM163AQ96GL9 167 aaPredicted RBP21.91■■□□□ 1.1
CCDC47-202ENST00000403162 MMRN2Q9H8L6 949 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 ZNF646O15015 1829 aaPredicted RBP21.91■■□□□ 1.1
CCDC47-202ENST00000403162 ESYT2A0FGR8 921 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 OPA1O60313 960 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 VIL1P09327 827 aaKnown RBP21.91■■□□□ 1.1
CCDC47-202ENST00000403162 MAGEA1P43355 309 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 FXR2P51116 673 aaKnown RBP eCLIP21.91■■□□□ 1.12e-7■■■■□ 21.2
CCDC47-202ENST00000403162 CXCL9Q07325 125 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 MAPK8IP2Q13387 824 aaPredicted RBP21.91■■□□□ 1.1
CCDC47-202ENST00000403162 RRAGAQ7L523 313 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 POTEDQ86YR6 584 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 SLC44A5Q8NCS7 719 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 CAVIN3Q969G5 261 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 DRC1Q96MC2 740 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 MTMR9Q96QG7 549 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 FAM107BQ9H098 131 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 PLEKHA4Q9H4M7 779 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 DAGLAQ9Y4D2 1042 aa21.91■■□□□ 1.1
CCDC47-202ENST00000403162 GAKO14976 1311 aa21.9■■□□□ 1.1
CCDC47-202ENST00000403162 GPR75-ASB3A0A0A6YYF3 556 aa21.9■■□□□ 1.1
CCDC47-202ENST00000403162 SSU72P8A0A1W2PR75 194 aa21.9■■□□□ 1.1
CCDC47-202ENST00000403162 IRAK1P51617 712 aa21.9■■□□□ 1.1
CCDC47-202ENST00000403162 GLE1Q53GS7 698 aaKnown RBP21.9■■□□□ 1.1
CCDC47-202ENST00000403162 CCDC181Q5TID7 509 aa21.9■■□□□ 1.1
CCDC47-202ENST00000403162 ALS2CLQ60I27 953 aa21.9■■□□□ 1.1
CCDC47-202ENST00000403162 PDXDC1Q6P996 788 aa21.9■■□□□ 1.1
CCDC47-202ENST00000403162 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.9■■□□□ 1.1
CCDC47-202ENST00000403162 EFCAB13Q8IY85 973 aa21.9■■□□□ 1.1
CCDC47-202ENST00000403162 RNF10Q8N5U6 811 aaKnown RBP21.9■■□□□ 1.1
CCDC47-202ENST00000403162 LARP4BQ92615 738 aaKnown RBP21.9■■□□□ 1.1
CCDC47-202ENST00000403162 ZNF287Q9HBT7 754 aa21.9■■□□□ 1.1
CCDC47-202ENST00000403162 TSKSQ9UJT2 592 aa21.9■■□□□ 1.1
CCDC47-202ENST00000403162 PAFAH1B1P43034 410 aa21.89■■□□□ 1.1
CCDC47-202ENST00000403162 NOP2P46087 812 aaKnown RBP21.89■■□□□ 1.1
CCDC47-202ENST00000403162 NNTQ13423 1086 aa21.89■■□□□ 1.1
CCDC47-202ENST00000403162 LRRC55Q6ZSA7 311 aa21.89■■□□□ 1.1
CCDC47-202ENST00000403162 TEKT1Q969V4 418 aa21.89■■□□□ 1.1
CCDC47-202ENST00000403162 PNMA5Q96PV4 448 aa21.89■■□□□ 1.1
CCDC47-202ENST00000403162 SEC63Q9UGP8 760 aaKnown RBP21.89■■□□□ 1.1
CCDC47-202ENST00000403162 PSME4Q14997 1843 aa21.89■■□□□ 1.09
CCDC47-202ENST00000403162 RBAK-RBAKDNI3L0D1 243 aa21.89■■□□□ 1.09
CCDC47-202ENST00000403162 CIAPIN1Q6FI81 312 aa21.89■■□□□ 1.09
CCDC47-202ENST00000403162 REXO1Q8N1G1 1221 aaKnown RBP21.89■■□□□ 1.09
CCDC47-202ENST00000403162 TLR10Q9BXR5 811 aa21.89■■□□□ 1.09
CCDC47-202ENST00000403162 CAPS2Q9BXY5 557 aa21.89■■□□□ 1.09
CCDC47-202ENST00000403162 CPVLQ9H3G5 476 aa21.89■■□□□ 1.09
CCDC47-202ENST00000403162 MYO3BQ8WXR4 1341 aa21.89■■□□□ 1.09
CCDC47-202ENST00000403162 CDK5RAP2Q96SN8 1893 aa21.88■■□□□ 1.09
CCDC47-202ENST00000403162 CRKP46108 304 aa21.88■■□□□ 1.09
CCDC47-202ENST00000403162 TTC31Q49AM3 519 aaPredicted RBP21.88■■□□□ 1.09
CCDC47-202ENST00000403162 TGFBRAP1Q8WUH2 860 aa21.88■■□□□ 1.09
CCDC47-202ENST00000403162 NOX5Q96PH1 765 aa21.88■■□□□ 1.09
CCDC47-202ENST00000403162 RIC8AQ9NPQ8 531 aa21.88■■□□□ 1.09
CCDC47-202ENST00000403162 RNF14Q9UBS8 474 aa21.88■■□□□ 1.09
CCDC47-202ENST00000403162 SALL4Q9UJQ4 1053 aa21.88■■□□□ 1.09
CCDC47-202ENST00000403162 ZBTB12Q9Y330 459 aaPredicted RBP21.88■■□□□ 1.09
CCDC47-202ENST00000403162 CPP00450 1065 aa21.88■■□□□ 1.09
CCDC47-202ENST00000403162 TXKP42681 527 aa21.88■■□□□ 1.09
CCDC47-202ENST00000403162 EHHADHQ08426 723 aa21.88■■□□□ 1.09
CCDC47-202ENST00000403162 PSMD2Q13200 908 aa21.88■■□□□ 1.09
CCDC47-202ENST00000403162 HHIPL2Q6UWX4 724 aa21.88■■□□□ 1.09
CCDC47-202ENST00000403162 DDX60LQ5H9U9 1706 aaKnown RBP21.87■■□□□ 1.09
CCDC47-202ENST00000403162 hCG_1984214I3L0E3 225 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 CLSTN1O94985 981 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 LMNB1P20700 586 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 RBM5P52756 815 aaKnown RBP eCLIP21.87■■□□□ 1.09
CCDC47-202ENST00000403162 SLC7A5Q01650 507 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 CALCRLQ16602 461 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 KLHDC7AQ5VTJ3 777 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 HGSNATQ68CP4 663 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 CERS3Q8IU89 383 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 ZNF713Q8N859 430 aaPredicted RBP21.87■■□□□ 1.09
CCDC47-202ENST00000403162 LRRC27Q9C0I9 530 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 PLCG2P16885 1265 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 CXCR5P32302 372 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 TNIP1Q15025 636 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 TMEM266Q2M3C6 531 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 C8orf74Q6P047 294 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 C16orf86Q6ZW13 317 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 NEDD1Q8NHV4 660 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 RAD54LQ92698 747 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 MTMR8Q96EF0 704 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 CDK5RAP3Q96JB5 506 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 TSG101Q99816 390 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 HINFPQ9BQA5 517 aa21.87■■□□□ 1.09
CCDC47-202ENST00000403162 NUCKS1Q9H1E3 243 aaKnown RBP21.87■■□□□ 1.09
CCDC47-202ENST00000403162 GRIN2DO15399 1336 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms