RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 KCNQ5Q9NR82 932 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 EHD2Q9NZN4 543 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 TMOD2Q9NZR1 351 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 SWAP70Q9UH65 585 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 AFF2P51816 1311 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 PRPF6O94906 941 aaKnown RBP8.48□□□□□ -1.05
HDAC9-201ENST00000401921 FTCDO95954 541 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 CCDC172P0C7W6 258 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 APBA1Q02410 837 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 LRRC63Q05C16 580 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 KIAA0753Q2KHM9 967 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 HAUS3Q68CZ6 603 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 CENPPQ6IPU0 288 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 CCDC174Q6PII3 467 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 FBXO11Q86XK2 927 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 TPH2Q8IWU9 490 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 ZFPM1Q8IX07 1006 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 RDH13Q8NBN7 331 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 RIN2Q8WYP3 895 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-201ENST00000401921 RIC8AQ9NPQ8 531 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 PCDHAC2Q9Y5I4 1007 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 TRIM66O15016 1216 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 MMP10P09238 476 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 ALDH1B1P30837 517 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 USP14P54578 494 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 DDR1Q08345 913 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 ASIC2Q16515 512 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 SHROOM1Q2M3G4 852 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-201ENST00000401921 C8orf74Q6P047 294 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 SLC30A10Q6XR72 485 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 CCDC17Q96LX7 622 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 TDRD3Q9H7E2 651 aaKnown RBP8.48□□□□□ -1.05
HDAC9-201ENST00000401921 VEZTQ9HBM0 779 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-201ENST00000401921 ARHGAP20Q9P2F6 1191 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 TCEAL9Q9UHQ7 104 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 CAPN6Q9Y6Q1 641 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 TIAM2Q8IVF5 1701 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 KDM3AQ9Y4C1 1321 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 hCG_1984214I3L0E3 225 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 DDX39AO00148 427 aaKnown RBP8.47□□□□□ -1.05
HDAC9-201ENST00000401921 MYO1CO00159 1063 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 PSMD14O00487 310 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 FAM13AO94988 1023 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 EHHADHQ08426 723 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 PRPF4BQ13523 1007 aaKnown RBP8.47□□□□□ -1.05
HDAC9-201ENST00000401921 PDIA5Q14554 519 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 ABCB5Q2M3G0 1257 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 TRAPPC11Q7Z392 1133 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 SP8Q8IXZ3 490 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 CERS5Q8N5B7 392 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 ZNF713Q8N859 430 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-201ENST00000401921 ERGIC2Q96RQ1 377 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 AMNQ9BXJ7 453 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.47□□□□□ -1.05
HDAC9-201ENST00000401921 FAM204AQ9H8W3 233 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 L1RE1Q9UN81 338 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 PACSIN2Q9UNF0 486 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-201ENST00000401921 JRKLQ9Y4A0 524 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 NHSL1Q5SYE7 1610 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 ESYT2A0FGR8 921 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 TCP10L2B9ZVM9 353 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 F5H6K3 240 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 FXR2P51116 673 aaKnown RBP eCLIP8.47□□□□□ -1.05
HDAC9-201ENST00000401921 KLRC3Q07444 240 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 MIIPQ5JXC2 388 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 FAM83BQ5T0W9 1011 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 RBM26Q5T8P6 1007 aaKnown RBP8.47□□□□□ -1.05
HDAC9-201ENST00000401921 KLHL7Q8IXQ5 586 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 SYCP3Q8IZU3 236 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 PIGOQ8TEQ8 1089 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 COG1Q8WTW3 980 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 MTMR9Q96QG7 549 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 CRAMP1Q96RY5 1269 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 ARMCX3Q9UH62 379 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-201ENST00000401921 ZBTB21Q9ULJ3 1066 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 PLAGL2Q9UPG8 496 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 HYOU1Q9Y4L1 999 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 SAMM50Q9Y512 469 aa8.47□□□□□ -1.05
HDAC9-201ENST00000401921 DDX60Q8IY21 1712 aaKnown RBP8.47□□□□□ -1.05
HDAC9-201ENST00000401921 ECM29Q5VYK3 1845 aa8.46□□□□□ -1.05
HDAC9-201ENST00000401921 DOCK2Q92608 1830 aa8.46□□□□□ -1.05
HDAC9-201ENST00000401921 CLRN2A0PK11 232 aa8.46□□□□□ -1.05
HDAC9-201ENST00000401921 PPP1R12BO60237 982 aaPredicted RBP8.46□□□□□ -1.05
HDAC9-201ENST00000401921 RNF40O75150 1001 aa8.46□□□□□ -1.05
HDAC9-201ENST00000401921 GH2P01242 217 aa8.46□□□□□ -1.05
HDAC9-201ENST00000401921 GCFC2P16383 781 aaKnown RBP8.46□□□□□ -1.05
HDAC9-201ENST00000401921 GUCY2CP25092 1073 aa8.46□□□□□ -1.05
HDAC9-201ENST00000401921 ARHGAP4P98171 946 aa8.46□□□□□ -1.05
HDAC9-201ENST00000401921 PSMD2Q13200 908 aa8.46□□□□□ -1.05
HDAC9-201ENST00000401921 ECM1Q16610 540 aa8.46□□□□□ -1.05
HDAC9-201ENST00000401921 MYCT1Q8N699 235 aa8.46□□□□□ -1.05
HDAC9-201ENST00000401921 RPGRIP1Q96KN7 1286 aa8.46□□□□□ -1.05
HDAC9-201ENST00000401921 BHMT2Q9H2M3 363 aa8.46□□□□□ -1.05
HDAC9-201ENST00000401921 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.46□□□□□ -1.05
HDAC9-201ENST00000401921 PI4KBQ9UBF8 816 aa8.46□□□□□ -1.05
HDAC9-201ENST00000401921 ATP6V0A2Q9Y487 856 aa8.46□□□□□ -1.05
HDAC9-201ENST00000401921 CTDP1Q9Y5B0 961 aaPredicted RBP8.46□□□□□ -1.05
HDAC9-201ENST00000401921 GOLGA6BA6NDN3 693 aa8.46□□□□□ -1.06
HDAC9-201ENST00000401921 LRRIQ3A6PVS8 624 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms