RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 MTFR1LQ9H019 292 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 NDST4Q9H3R1 872 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 ZNF70Q9UC06 446 aaPredicted RBP11.93□□□□□ -0.5
LINC00649-202ENST00000400353 PPP1R1BQ9UD71 204 aaPredicted RBP11.93□□□□□ -0.5
LINC00649-202ENST00000400353 KIAA1024Q9UPX6 916 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 EIF3CLB5ME19 914 aaKnown RBP11.92□□□□□ -0.5
LINC00649-202ENST00000400353 ATP8B1O43520 1251 aa11.92□□□□□ -0.5
LINC00649-202ENST00000400353 HNRNPH3P31942 346 aaKnown RBP11.92□□□□□ -0.5
LINC00649-202ENST00000400353 STAT2P52630 851 aa11.92□□□□□ -0.5
LINC00649-202ENST00000400353 ECM1Q16610 540 aa11.92□□□□□ -0.5
LINC00649-202ENST00000400353 WHAMMP3Q1A5X7 153 aa11.92□□□□□ -0.5
LINC00649-202ENST00000400353 KIF4BQ2VIQ3 1234 aa11.92□□□□□ -0.5
LINC00649-202ENST00000400353 SPDYE2Q495Y8 402 aa11.92□□□□□ -0.5
LINC00649-202ENST00000400353 LRRC55Q6ZSA7 311 aa11.92□□□□□ -0.5
LINC00649-202ENST00000400353 RSRC2Q7L4I2 434 aaKnown RBP11.92□□□□□ -0.5
LINC00649-202ENST00000400353 FAM160B2Q86V87 743 aa11.92□□□□□ -0.5
LINC00649-202ENST00000400353 GPBP1Q86WP2 473 aa11.92□□□□□ -0.5
LINC00649-202ENST00000400353 SLC35F6Q8N357 371 aa11.92□□□□□ -0.5
LINC00649-202ENST00000400353 OGFOD1Q8N543 542 aa11.92□□□□□ -0.5
LINC00649-202ENST00000400353 MTMR14Q8NCE2 650 aa11.92□□□□□ -0.5
LINC00649-202ENST00000400353 CHURC1Q8WUH1 139 aa11.92□□□□□ -0.5
LINC00649-202ENST00000400353 EIF3CQ99613 913 aaKnown RBP11.92□□□□□ -0.5
LINC00649-202ENST00000400353 TMX2Q9Y320 296 aa11.92□□□□□ -0.5
LINC00649-202ENST00000400353 FRMD3A2A2Y4 597 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 RPA1P27694 616 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 BMS1Q14692 1282 aaKnown RBP11.91□□□□□ -0.5
LINC00649-202ENST00000400353 SHROOM1Q2M3G4 852 aaPredicted RBP11.91□□□□□ -0.5
LINC00649-202ENST00000400353 ZCWPW2Q504Y3 356 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 SRGAP1Q7Z6B7 1085 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 LRRN4CLQ8ND94 238 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 HPS3Q969F9 1004 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 GMLQ99445 158 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 CHP1Q99653 195 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 TSGA10Q9BZW7 698 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 PRR12Q9ULL5 1215 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 COL4A3BPQ9Y5P4 624 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 TTC36A6NLP5 189 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 E9PMD0 336 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 KRT86O43790 486 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 SSBP05455 408 aaKnown RBP eCLIP11.91□□□□□ -0.5
LINC00649-202ENST00000400353 KRT18P05783 430 aaKnown RBP11.91□□□□□ -0.5
LINC00649-202ENST00000400353 CYP11B2P19099 503 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 USH1GQ495M9 461 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 PRR16Q569H4 304 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 WDR59Q6PJI9 974 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 TXLNBQ8N3L3 684 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 AGBL3Q8NEM8 1001 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 POLR3CQ9BUI4 534 aaPredicted RBP11.91□□□□□ -0.5
LINC00649-202ENST00000400353 NUCKS1Q9H1E3 243 aaKnown RBP11.91□□□□□ -0.5
LINC00649-202ENST00000400353 DNM3Q9UQ16 869 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 SIK3Q9Y2K2 1263 aa11.91□□□□□ -0.5
LINC00649-202ENST00000400353 POTEB3A0JP26 581 aa11.9□□□□□ -0.5
LINC00649-202ENST00000400353 RASSF10A6NK89 507 aa11.9□□□□□ -0.5
LINC00649-202ENST00000400353 POTECB2RU33 542 aa11.9□□□□□ -0.5
LINC00649-202ENST00000400353 TCP10L2B9ZVM9 353 aa11.9□□□□□ -0.5
LINC00649-202ENST00000400353 MED24O75448 989 aa11.9□□□□□ -0.5
LINC00649-202ENST00000400353 POLD1P28340 1107 aa11.9□□□□□ -0.5
LINC00649-202ENST00000400353 ZNF76P36508 570 aa11.9□□□□□ -0.5
LINC00649-202ENST00000400353 SLC12A3P55017 1021 aa11.9□□□□□ -0.5
LINC00649-202ENST00000400353 MARSP56192 900 aaKnown RBP11.9□□□□□ -0.5
LINC00649-202ENST00000400353 SPIRE1Q08AE8 756 aa11.9□□□□□ -0.5
LINC00649-202ENST00000400353 EDRF1Q3B7T1 1238 aa11.9□□□□□ -0.5
LINC00649-202ENST00000400353 CCDC40Q4G0X9 1142 aa11.9□□□□□ -0.5
LINC00649-202ENST00000400353 POTEBQ6S5H4 581 aa11.9□□□□□ -0.5
LINC00649-202ENST00000400353 TMCO3Q6UWJ1 677 aa11.9□□□□□ -0.5
LINC00649-202ENST00000400353 KIAA1328Q86T90 577 aa11.9□□□□□ -0.5
LINC00649-202ENST00000400353 FAM83AQ86UY5 434 aa11.9□□□□□ -0.5
LINC00649-202ENST00000400353 ZC3H3Q8IXZ2 948 aaKnown RBP11.9□□□□□ -0.5
LINC00649-202ENST00000400353 LARGE2Q8N3Y3 721 aa11.9□□□□□ -0.5
LINC00649-202ENST00000400353 SYT2Q8N9I0 419 aaPredicted RBP11.9□□□□□ -0.5
LINC00649-202ENST00000400353 NHEJ1Q9H9Q4 299 aaPredicted RBP11.9□□□□□ -0.5
LINC00649-202ENST00000400353 FAM184BQ9ULE4 1060 aa11.9□□□□□ -0.5
LINC00649-202ENST00000400353 ZBTB21Q9ULJ3 1066 aa11.9□□□□□ -0.5
LINC00649-202ENST00000400353 MRPL11Q9Y3B7 192 aaKnown RBP11.9□□□□□ -0.5
LINC00649-202ENST00000400353 A0A1W2PRG0 241 aa11.9□□□□□ -0.51
LINC00649-202ENST00000400353 PSMD14O00487 310 aa11.9□□□□□ -0.51
LINC00649-202ENST00000400353 MUTP22033 750 aa11.9□□□□□ -0.51
LINC00649-202ENST00000400353 CHMP4BP1P59074 171 aa11.9□□□□□ -0.51
LINC00649-202ENST00000400353 JAG1P78504 1218 aa11.9□□□□□ -0.51
LINC00649-202ENST00000400353 RRP1BQ14684 758 aaKnown RBP11.9□□□□□ -0.51
LINC00649-202ENST00000400353 HERC4Q5GLZ8 1057 aaPredicted RBP11.9□□□□□ -0.51
LINC00649-202ENST00000400353 NCAPH2Q6IBW4 605 aa11.9□□□□□ -0.51
LINC00649-202ENST00000400353 KRT222Q8N1A0 295 aa11.9□□□□□ -0.51
LINC00649-202ENST00000400353 JAKMIP2Q96AA8 810 aa11.9□□□□□ -0.51
LINC00649-202ENST00000400353 LENG9Q96B70 501 aa11.9□□□□□ -0.51
LINC00649-202ENST00000400353 IRX2Q9BZI1 471 aaPredicted RBP11.9□□□□□ -0.51
LINC00649-202ENST00000400353 RANBP17Q9H2T7 1088 aaKnown RBP11.9□□□□□ -0.51
LINC00649-202ENST00000400353 AGPAT5Q9NUQ2 364 aa11.9□□□□□ -0.51
LINC00649-202ENST00000400353 FAM53CQ9NYF3 392 aa11.9□□□□□ -0.51
LINC00649-202ENST00000400353 REXO2Q9Y3B8 237 aaKnown RBP11.9□□□□□ -0.51
LINC00649-202ENST00000400353 RABGAP1Q9Y3P9 1069 aa11.9□□□□□ -0.51
LINC00649-202ENST00000400353 PCDHA2Q9Y5H9 948 aa11.9□□□□□ -0.51
LINC00649-202ENST00000400353 GCOM1H8Y6P7 765 aaPredicted RBP11.89□□□□□ -0.51
LINC00649-202ENST00000400353 TRAF5O00463 557 aa11.89□□□□□ -0.51
LINC00649-202ENST00000400353 TUBBP07437 444 aa11.89□□□□□ -0.51
LINC00649-202ENST00000400353 POLR2MP0CAP2 368 aa11.89□□□□□ -0.51
LINC00649-202ENST00000400353 CLCN6P51797 869 aa11.89□□□□□ -0.51
LINC00649-202ENST00000400353 CBX1P83916 185 aa11.89□□□□□ -0.51
LINC00649-202ENST00000400353 SPA17Q15506 151 aa11.89□□□□□ -0.51
LINC00649-202ENST00000400353 TEX35Q5T0J7 233 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms