RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 FIBCD1Q8N539 461 aa21.09■□□□□ 0.97
UFD1-202ENST00000399523 APBB2Q92870 758 aa21.09■□□□□ 0.97
UFD1-202ENST00000399523 SPATA33Q96N06 139 aa21.09■□□□□ 0.97
UFD1-202ENST00000399523 PXMP2Q9NR77 195 aa21.09■□□□□ 0.97
UFD1-202ENST00000399523 RWDD3Q9Y3V2 267 aa21.09■□□□□ 0.97
UFD1-202ENST00000399523 EYA4O95677 639 aa21.08■□□□□ 0.97
UFD1-202ENST00000399523 ADAM15Q13444 863 aa21.08■□□□□ 0.97
UFD1-202ENST00000399523 ALG13Q9NP73 1137 aaKnown RBP21.08■□□□□ 0.97
UFD1-202ENST00000399523 MYH6P13533 1939 aa21.08■□□□□ 0.96
UFD1-202ENST00000399523 KMT2EQ8IZD2 1858 aa21.07■□□□□ 0.96
UFD1-202ENST00000399523 TREHO43280 583 aa21.07■□□□□ 0.96
UFD1-202ENST00000399523 HSPD1P10809 573 aaKnown RBP21.07■□□□□ 0.96
UFD1-202ENST00000399523 GTF2F1P35269 517 aaKnown RBP eCLIP21.07■□□□□ 0.96
UFD1-202ENST00000399523 SUGP1Q8IWZ8 645 aaKnown RBP21.07■□□□□ 0.96
UFD1-202ENST00000399523 ADGRF4Q8IZF3 695 aa21.07■□□□□ 0.96
UFD1-202ENST00000399523 CLP1Q92989 425 aaKnown RBP21.07■□□□□ 0.96
UFD1-202ENST00000399523 MSLNLQ96KJ4 702 aa21.07■□□□□ 0.96
UFD1-202ENST00000399523 MRPL11Q9Y3B7 192 aaKnown RBP21.07■□□□□ 0.96
UFD1-202ENST00000399523 FAM186AA6NE01 2351 aa21.06■□□□□ 0.96
UFD1-202ENST00000399523 H3BRB1 525 aa21.06■□□□□ 0.96
UFD1-202ENST00000399523 LINC01565O15544 149 aa21.06■□□□□ 0.96
UFD1-202ENST00000399523 GGPS1O95749 300 aa21.06■□□□□ 0.96
UFD1-202ENST00000399523 SMIM10L2AP0DMW4 78 aa21.06■□□□□ 0.96
UFD1-202ENST00000399523 SMIM10L2BP0DMW5 78 aa21.06■□□□□ 0.96
UFD1-202ENST00000399523 PCP11498 1178 aaKnown RBP21.06■□□□□ 0.96
UFD1-202ENST00000399523 ZXDAP98168 799 aa21.06■□□□□ 0.96
UFD1-202ENST00000399523 FOXK2Q01167 660 aa21.06■□□□□ 0.96
UFD1-202ENST00000399523 FBXL6Q8N531 539 aa21.06■□□□□ 0.96
UFD1-202ENST00000399523 OTUD7AQ8TE49 926 aaPredicted RBP21.06■□□□□ 0.96
UFD1-202ENST00000399523 RNPEPQ9H4A4 650 aa21.06■□□□□ 0.96
UFD1-202ENST00000399523 TUT1Q9H6E5 874 aaKnown RBP21.06■□□□□ 0.96
UFD1-202ENST00000399523 RC3H2Q9HBD1 1191 aaKnown RBP21.06■□□□□ 0.96
UFD1-202ENST00000399523 LOC730098B7Z3J9 87 aa21.05■□□□□ 0.96
UFD1-202ENST00000399523 GFRA3O60609 400 aa21.05■□□□□ 0.96
UFD1-202ENST00000399523 MMP1P03956 469 aa21.05■□□□□ 0.96
UFD1-202ENST00000399523 CTSHP09668 335 aa21.05■□□□□ 0.96
UFD1-202ENST00000399523 TGFB3P10600 412 aa21.05■□□□□ 0.96
UFD1-202ENST00000399523 HSD17B4P51659 736 aa21.05■□□□□ 0.96
UFD1-202ENST00000399523 SP2Q02086 613 aa21.05■□□□□ 0.96
UFD1-202ENST00000399523 GHRHRQ02643 423 aa21.05■□□□□ 0.96
UFD1-202ENST00000399523 CBX2Q14781 532 aaPredicted RBP21.05■□□□□ 0.96
UFD1-202ENST00000399523 QRICH1Q2TAL8 776 aa21.05■□□□□ 0.96
UFD1-202ENST00000399523 FAM26DQ5JW98 314 aa21.05■□□□□ 0.96
UFD1-202ENST00000399523 DGKHQ86XP1 1220 aa21.05■□□□□ 0.96
UFD1-202ENST00000399523 PDCD2LQ9BRP1 358 aa21.05■□□□□ 0.96
UFD1-202ENST00000399523 IGFLR1Q9H665 355 aa21.05■□□□□ 0.96
UFD1-202ENST00000399523 HELLSQ9NRZ9 838 aa21.05■□□□□ 0.96
UFD1-202ENST00000399523 TTC3P53804 2025 aa21.05■□□□□ 0.96
UFD1-202ENST00000399523 ADGRA3Q8IWK6 1321 aa21.04■□□□□ 0.96
UFD1-202ENST00000399523 SORBS3O60504 671 aa21.04■□□□□ 0.96
UFD1-202ENST00000399523 CAMK1Q14012 370 aa21.04■□□□□ 0.96
UFD1-202ENST00000399523 VSIG10LQ86VR7 867 aa21.04■□□□□ 0.96
UFD1-202ENST00000399523 PLVAPQ9BX97 442 aa21.04■□□□□ 0.96
UFD1-202ENST00000399523 ZMYM6O95789 1325 aa21.04■□□□□ 0.96
UFD1-202ENST00000399523 OPLAHO14841 1288 aa21.03■□□□□ 0.96
UFD1-202ENST00000399523 CFBP00751 764 aa21.03■□□□□ 0.96
UFD1-202ENST00000399523 UBA1P22314 1058 aaKnown RBP21.03■□□□□ 0.96
UFD1-202ENST00000399523 C20orf194Q5TEA3 1177 aa21.03■□□□□ 0.96
UFD1-202ENST00000399523 MFSD6Q6ZSS7 791 aa21.03■□□□□ 0.96
UFD1-202ENST00000399523 STOX1Q6ZVD7 989 aa21.03■□□□□ 0.96
UFD1-202ENST00000399523 MIER1Q8N108 512 aa21.03■□□□□ 0.96
UFD1-202ENST00000399523 SMRP1Q8NCR6 262 aa21.03■□□□□ 0.96
UFD1-202ENST00000399523 CLEC1BQ9P126 229 aa21.03■□□□□ 0.96
UFD1-202ENST00000399523 PLAGL2Q9UPG8 496 aa21.03■□□□□ 0.96
UFD1-202ENST00000399523 MYO15AQ9UKN7 3530 aa21.03■□□□□ 0.96
UFD1-202ENST00000399523 LGALS2P05162 132 aa21.02■□□□□ 0.96
UFD1-202ENST00000399523 GNAT1P11488 350 aa21.02■□□□□ 0.96
UFD1-202ENST00000399523 MYCLP12524 364 aaPredicted RBP21.02■□□□□ 0.96
UFD1-202ENST00000399523 NDUFV1P49821 464 aa21.02■□□□□ 0.96
UFD1-202ENST00000399523 HAND2P61296 217 aa21.02■□□□□ 0.96
UFD1-202ENST00000399523 COASYQ13057 564 aa21.02■□□□□ 0.96
UFD1-202ENST00000399523 PNMA1Q8ND90 353 aa21.02■□□□□ 0.96
UFD1-202ENST00000399523 ZNF689Q96CS4 500 aaPredicted RBP21.02■□□□□ 0.96
UFD1-202ENST00000399523 IRF2BPLQ9H1B7 796 aa21.02■□□□□ 0.96
UFD1-202ENST00000399523 MLXIPQ9HAP2 919 aa21.02■□□□□ 0.96
UFD1-202ENST00000399523 MAP3K20Q9NYL2 800 aaKnown RBP21.02■□□□□ 0.96
UFD1-202ENST00000399523 CACNA1AO00555 2505 aa21.01■□□□□ 0.95
UFD1-202ENST00000399523 KAT6AQ92794 2004 aa21.01■□□□□ 0.95
UFD1-202ENST00000399523 MX1P20591 662 aa21.01■□□□□ 0.95
UFD1-202ENST00000399523 RRP1P56182 461 aaKnown RBP21.01■□□□□ 0.95
UFD1-202ENST00000399523 ADAM17P78536 824 aa21.01■□□□□ 0.95
UFD1-202ENST00000399523 ASPRV1Q53RT3 343 aa21.01■□□□□ 0.95
UFD1-202ENST00000399523 EFHBQ8N7U6 833 aa21.01■□□□□ 0.95
UFD1-202ENST00000399523 P2RX5Q93086 422 aa21.01■□□□□ 0.95
UFD1-202ENST00000399523 PPP2R3CQ969Q6 453 aa21.01■□□□□ 0.95
UFD1-202ENST00000399523 JMJD4Q9H9V9 463 aa21.01■□□□□ 0.95
UFD1-202ENST00000399523 SETD4Q9NVD3 440 aa21.01■□□□□ 0.95
UFD1-202ENST00000399523 CHRNA1P02708 482 aa21■□□□□ 0.95
UFD1-202ENST00000399523 SIGLEC14Q08ET2 396 aa21■□□□□ 0.95
UFD1-202ENST00000399523 PGM5Q15124 567 aa21■□□□□ 0.95
UFD1-202ENST00000399523 MCMDC2Q4G0Z9 681 aa21■□□□□ 0.95
UFD1-202ENST00000399523 TBC1D10CQ8IV04 446 aa21■□□□□ 0.95
UFD1-202ENST00000399523 ESR2Q92731 530 aa21■□□□□ 0.95
UFD1-202ENST00000399523 EVI5LQ96CN4 794 aa21■□□□□ 0.95
UFD1-202ENST00000399523 ZKSCAN3Q9BRR0 538 aa21■□□□□ 0.95
UFD1-202ENST00000399523 USP26Q9BXU7 913 aa21■□□□□ 0.95
UFD1-202ENST00000399523 EHMT1Q9H9B1 1298 aa21■□□□□ 0.95
UFD1-202ENST00000399523 FAM86C1Q9NVL1 165 aa21■□□□□ 0.95
UFD1-202ENST00000399523 ENPP3O14638 875 aa20.99■□□□□ 0.95
UFD1-202ENST00000399523 VCPP55072 806 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms