RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 CHD9Q3L8U1 2897 aa17.05■□□□□ 0.32
SMIM11A-203ENST00000399299 MAFGO15525 162 aa17.04■□□□□ 0.32
SMIM11A-203ENST00000399299 LGALS2P05162 132 aa17.04■□□□□ 0.32
SMIM11A-203ENST00000399299 IQCF3P0C7M6 154 aa17.04■□□□□ 0.32
SMIM11A-203ENST00000399299 ADCY7P51828 1080 aa17.04■□□□□ 0.32
SMIM11A-203ENST00000399299 AP3B2Q13367 1082 aa17.04■□□□□ 0.32
SMIM11A-203ENST00000399299 RETREG2Q8NC44 543 aa17.04■□□□□ 0.32
SMIM11A-203ENST00000399299 AFAP1L1Q8TED9 768 aa17.04■□□□□ 0.32
SMIM11A-203ENST00000399299 GPR20Q99678 358 aa17.04■□□□□ 0.32
SMIM11A-203ENST00000399299 ALG1Q9BT22 464 aa17.04■□□□□ 0.32
SMIM11A-203ENST00000399299 BCAS3Q9H6U6 928 aa17.04■□□□□ 0.32
SMIM11A-203ENST00000399299 STXBP5LQ9Y2K9 1186 aa17.04■□□□□ 0.32
SMIM11A-203ENST00000399299 ESYT2A0FGR8 921 aa17.03■□□□□ 0.32
SMIM11A-203ENST00000399299 SMCO2A6NFE2 343 aa17.03■□□□□ 0.32
SMIM11A-203ENST00000399299 H3BRB1 525 aa17.03■□□□□ 0.32
SMIM11A-203ENST00000399299 SCG2P13521 617 aa17.03■□□□□ 0.32
SMIM11A-203ENST00000399299 KCNA2P16389 499 aa17.03■□□□□ 0.32
SMIM11A-203ENST00000399299 ITGB5P18084 799 aa17.03■□□□□ 0.32
SMIM11A-203ENST00000399299 CLK2P49760 499 aaKnown RBP17.03■□□□□ 0.32
SMIM11A-203ENST00000399299 PTK7Q13308 1070 aa17.03■□□□□ 0.32
SMIM11A-203ENST00000399299 GUCD1Q96NT3 240 aa17.03■□□□□ 0.32
SMIM11A-203ENST00000399299 TUT1Q9H6E5 874 aaKnown RBP17.03■□□□□ 0.32
SMIM11A-203ENST00000399299 CYP46A1Q9Y6A2 500 aa17.03■□□□□ 0.32
SMIM11A-203ENST00000399299 GBF1Q92538 1859 aa17.02■□□□□ 0.32
SMIM11A-203ENST00000399299 PRPF3O43395 683 aaKnown RBP17.02■□□□□ 0.32
SMIM11A-203ENST00000399299 PARNO95453 639 aaKnown RBP17.02■□□□□ 0.32
SMIM11A-203ENST00000399299 DNAJB2P25686 324 aa17.02■□□□□ 0.32
SMIM11A-203ENST00000399299 HOXC8P31273 242 aa17.02■□□□□ 0.32
SMIM11A-203ENST00000399299 MTMR1Q13613 665 aa17.02■□□□□ 0.32
SMIM11A-203ENST00000399299 TOB2Q14106 344 aaPredicted RBP17.02■□□□□ 0.32
SMIM11A-203ENST00000399299 NTRK3Q16288 839 aa17.02■□□□□ 0.32
SMIM11A-203ENST00000399299 OTOP2Q7RTS6 562 aa17.02■□□□□ 0.32
SMIM11A-203ENST00000399299 CCDC12Q8WUD4 166 aaPredicted RBP17.02■□□□□ 0.32
SMIM11A-203ENST00000399299 DHX38Q92620 1227 aaKnown RBP17.02■□□□□ 0.32
SMIM11A-203ENST00000399299 RNF26Q9BY78 433 aaPredicted RBP17.02■□□□□ 0.32
SMIM11A-203ENST00000399299 ANO3Q9BYT9 981 aa17.02■□□□□ 0.32
SMIM11A-203ENST00000399299 TTYH1Q9H313 450 aaPredicted RBP17.02■□□□□ 0.32
SMIM11A-203ENST00000399299 SEMA6BQ9H3T3 888 aa17.02■□□□□ 0.32
SMIM11A-203ENST00000399299 JADE2Q9NQC1 790 aa17.02■□□□□ 0.32
SMIM11A-203ENST00000399299 CXXC1Q9P0U4 656 aaPredicted RBP17.02■□□□□ 0.32
SMIM11A-203ENST00000399299 TET1Q8NFU7 2136 aa17.02■□□□□ 0.31
SMIM11A-203ENST00000399299 ATP9AO75110 1047 aa17.01■□□□□ 0.31
SMIM11A-203ENST00000399299 SELPP16109 830 aa17.01■□□□□ 0.31
SMIM11A-203ENST00000399299 IFNAR1P17181 557 aa17.01■□□□□ 0.31
SMIM11A-203ENST00000399299 PDIA3P30101 505 aaKnown RBP17.01■□□□□ 0.31
SMIM11A-203ENST00000399299 SREBF1P36956 1147 aa17.01■□□□□ 0.31
SMIM11A-203ENST00000399299 PKN1Q16512 942 aa17.01■□□□□ 0.31
SMIM11A-203ENST00000399299 MCTP2Q6DN12 878 aa17.01■□□□□ 0.31
SMIM11A-203ENST00000399299 MXRA8Q9BRK3 442 aa17.01■□□□□ 0.31
SMIM11A-203ENST00000399299 ZMYND12Q9H0C1 365 aa17.01■□□□□ 0.31
SMIM11A-203ENST00000399299 ZNF215Q9UL58 517 aaPredicted RBP17.01■□□□□ 0.31
SMIM11A-203ENST00000399299 ACTN1P12814 892 aa17■□□□□ 0.31
SMIM11A-203ENST00000399299 AKAP17AQ02040 695 aaKnown RBP17■□□□□ 0.31
SMIM11A-203ENST00000399299 TRIM71Q2Q1W2 868 aaKnown RBP17■□□□□ 0.31
SMIM11A-203ENST00000399299 LRRC8DQ7L1W4 858 aa17■□□□□ 0.31
SMIM11A-203ENST00000399299 DEFB128Q7Z7B8 93 aa17■□□□□ 0.31
SMIM11A-203ENST00000399299 SERINC5Q86VE9 423 aa17■□□□□ 0.31
SMIM11A-203ENST00000399299 FAM161BQ96MY7 647 aa17■□□□□ 0.31
SMIM11A-203ENST00000399299 PBX4Q9BYU1 374 aa17■□□□□ 0.31
SMIM11A-203ENST00000399299 SLC4A7Q9Y6M7 1214 aa17■□□□□ 0.31
SMIM11A-203ENST00000399299 CDH23Q9H251 3354 aa17■□□□□ 0.31
SMIM11A-203ENST00000399299 C17orf102A2RUQ5 167 aa16.99■□□□□ 0.31
SMIM11A-203ENST00000399299 SMIM10L2AP0DMW4 78 aa16.99■□□□□ 0.31
SMIM11A-203ENST00000399299 SMIM10L2BP0DMW5 78 aa16.99■□□□□ 0.31
SMIM11A-203ENST00000399299 CKBP12277 381 aa16.99■□□□□ 0.31
SMIM11A-203ENST00000399299 TCF7P36402 384 aaPredicted RBP16.99■□□□□ 0.31
SMIM11A-203ENST00000399299 HIC1Q14526 733 aa16.99■□□□□ 0.31
SMIM11A-203ENST00000399299 RAB30Q15771 203 aa16.99■□□□□ 0.31
SMIM11A-203ENST00000399299 CEP55Q53EZ4 464 aa16.99■□□□□ 0.31
SMIM11A-203ENST00000399299 SEPT1Q8WYJ6 367 aa16.99■□□□□ 0.31
SMIM11A-203ENST00000399299 PHKBQ93100 1093 aa16.99■□□□□ 0.31
SMIM11A-203ENST00000399299 TIFAQ96CG3 184 aa16.99■□□□□ 0.31
SMIM11A-203ENST00000399299 ZNF274Q96GC6 653 aaPredicted RBP16.99■□□□□ 0.31
SMIM11A-203ENST00000399299 PGBD1Q96JS3 809 aa16.99■□□□□ 0.31
SMIM11A-203ENST00000399299 UPF3BQ9BZI7 483 aaKnown RBP16.99■□□□□ 0.31
SMIM11A-203ENST00000399299 C6orf50Q9HD87 102 aa16.99■□□□□ 0.31
SMIM11A-203ENST00000399299 KCNH7Q9NS40 1196 aa16.99■□□□□ 0.31
SMIM11A-203ENST00000399299 KAT6AQ92794 2004 aa16.99■□□□□ 0.31
SMIM11A-203ENST00000399299 NFASCO94856 1347 aa16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 GRXCR1A8MXD5 290 aa16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 EIF5BO60841 1220 aaKnown RBP16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 BAIAP3O94812 1187 aa16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 GNAT1P11488 350 aa16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 GNA11P29992 359 aa16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 ANAPC15P60006 121 aa16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 CCT2P78371 535 aaKnown RBP16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 ZNF200P98182 395 aaPredicted RBP16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 SP4Q02446 784 aa16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 NIPA1Q7RTP0 329 aa16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 TRIM50Q86XT4 487 aa16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 REXO1Q8N1G1 1221 aaKnown RBP16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 CCDC148Q8NFR7 591 aa16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 CRYGNQ8WXF5 182 aa16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 ATP6V0A1Q93050 837 aa16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 CDX2Q99626 313 aaPredicted RBP16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 RNPEPQ9H4A4 650 aa16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 NCOA5Q9HCD5 579 aaKnown RBP16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 TMEM260Q9NX78 707 aa16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 MSRAQ9UJ68 235 aa16.98■□□□□ 0.31
SMIM11A-203ENST00000399299 TELO2Q9Y4R8 837 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms