RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 WDR11Q9BZH6 1224 aa13.65□□□□□ -0.22
SMIM11A-201ENST00000399292 LY9Q9HBG7 655 aa13.65□□□□□ -0.22
SMIM11A-201ENST00000399292 PRDM5Q9NQX1 630 aaPredicted RBP13.65□□□□□ -0.22
SMIM11A-201ENST00000399292 PCDHA1Q9Y5I3 950 aa13.65□□□□□ -0.22
SMIM11A-201ENST00000399292 FRMPD3Q5JV73 1810 aa13.64□□□□□ -0.23
SMIM11A-201ENST00000399292 RBM47A0AV96 593 aaKnown RBP13.64□□□□□ -0.23
SMIM11A-201ENST00000399292 CCDC69A6NI79 296 aa13.64□□□□□ -0.23
SMIM11A-201ENST00000399292 DCDC2CA8MYV0 355 aa13.64□□□□□ -0.23
SMIM11A-201ENST00000399292 CTAGE5O15320 804 aa13.64□□□□□ -0.23
SMIM11A-201ENST00000399292 PQBP1O60828 265 aaKnown RBP13.64□□□□□ -0.23
SMIM11A-201ENST00000399292 CFBP00751 764 aa13.64□□□□□ -0.23
SMIM11A-201ENST00000399292 KIF5BP33176 963 aa13.64□□□□□ -0.23
SMIM11A-201ENST00000399292 LIFRP42702 1097 aa13.64□□□□□ -0.23
SMIM11A-201ENST00000399292 FSCN1Q16658 493 aaKnown RBP13.64□□□□□ -0.23
SMIM11A-201ENST00000399292 TMEM63BQ5T3F8 832 aa13.64□□□□□ -0.23
SMIM11A-201ENST00000399292 ZNF654Q8IZM8 581 aa13.64□□□□□ -0.23
SMIM11A-201ENST00000399292 CTCFLQ8NI51 663 aaPredicted RBP13.64□□□□□ -0.23
SMIM11A-201ENST00000399292 TOX2Q96NM4 488 aa13.64□□□□□ -0.23
SMIM11A-201ENST00000399292 PIGSQ96S52 555 aa13.64□□□□□ -0.23
SMIM11A-201ENST00000399292 IWS1Q96ST2 819 aa13.64□□□□□ -0.23
SMIM11A-201ENST00000399292 MAP3K20Q9NYL2 800 aaKnown RBP13.64□□□□□ -0.23
SMIM11A-201ENST00000399292 ALPK3Q96L96 1907 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 PNMA6FA0A0J9YX94 578 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 SH2B2O14492 632 aaPredicted RBP13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 CYTH3O43739 400 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 PPP1R11O60927 126 aaPredicted RBP13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 CABYRO75952 493 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 DDAH1O94760 285 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 CLTBP09497 229 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 GNAQP50148 359 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 CDK7P50613 346 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 SLC35G1Q2M3R5 365 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 ARHGEF16Q5VV41 709 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 ANKRD33Q7Z3H0 272 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 SH3RF1Q7Z6J0 888 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 TDHQ8IZJ6 230 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 SAMD3Q8N6K7 520 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 SCFD2Q8WU76 684 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 NEK1Q96PY6 1258 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 LZTS2Q9BRK4 669 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 MYL10Q9BUA6 226 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 PDLIM7Q9NR12 457 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 TMEM39AQ9NV64 488 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 COL20A1Q9P218 1284 aa13.63□□□□□ -0.23
SMIM11A-201ENST00000399292 A0A0C4DFX4 3053 aa13.62□□□□□ -0.23
SMIM11A-201ENST00000399292 A0A0U1RQG5 324 aaPredicted RBP13.62□□□□□ -0.23
SMIM11A-201ENST00000399292 TRIM43BA6NCK2 446 aa13.62□□□□□ -0.23
SMIM11A-201ENST00000399292 CFAP99D6REC4 459 aa13.62□□□□□ -0.23
SMIM11A-201ENST00000399292 ARVCFO00192 962 aa13.62□□□□□ -0.23
SMIM11A-201ENST00000399292 NKRFO15226 690 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMIM11A-201ENST00000399292 CALM1P0DP23 149 aa13.62□□□□□ -0.23
SMIM11A-201ENST00000399292 CALM2P0DP24 149 aa13.62□□□□□ -0.23
SMIM11A-201ENST00000399292 CALM3P0DP25 149 aa13.62□□□□□ -0.23
SMIM11A-201ENST00000399292 PTGS1P23219 599 aa13.62□□□□□ -0.23
SMIM11A-201ENST00000399292 VARSP26640 1264 aaKnown RBP13.62□□□□□ -0.23
SMIM11A-201ENST00000399292 SMARCA1P28370 1054 aa13.62□□□□□ -0.23
SMIM11A-201ENST00000399292 FAAP100Q0VG06 881 aa13.62□□□□□ -0.23
SMIM11A-201ENST00000399292 STXBP2Q15833 593 aa13.62□□□□□ -0.23
SMIM11A-201ENST00000399292 TSGA10IPQ3SY00 556 aa13.62□□□□□ -0.23
SMIM11A-201ENST00000399292 CXCL17Q6UXB2 119 aa13.62□□□□□ -0.23
SMIM11A-201ENST00000399292 TRIM43Q96BQ3 446 aaPredicted RBP13.62□□□□□ -0.23
SMIM11A-201ENST00000399292 SLC12A7Q9Y666 1083 aa13.62□□□□□ -0.23
SMIM11A-201ENST00000399292 MROH7Q68CQ1 1323 aa13.62□□□□□ -0.23
SMIM11A-201ENST00000399292 GCOM1H8Y6P7 765 aaPredicted RBP13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 OPLAHO14841 1288 aa13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 KIAA0355O15063 1070 aa13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 CAPN5O15484 640 aaPredicted RBP13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 EIF3JO75822 258 aaKnown RBP13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 POLR2MP0CAP2 368 aa13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 TXNP10599 105 aaKnown RBP13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 RAG1P15918 1043 aa13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 CPT1AP50416 773 aa13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 HSD17B4P51659 736 aa13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 GHRHRQ02643 423 aa13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 COL9A3Q14050 684 aaPredicted RBP13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 KRT32Q14532 448 aa13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 TTLL4Q14679 1199 aa13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 PPP2R5BQ15173 497 aa13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 BRDTQ58F21 947 aaPredicted RBP13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 SYNE3Q6ZMZ3 975 aa13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 DHX32Q7L7V1 743 aaKnown RBP13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 OR6J1Q8NGC5 347 aa13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 PIBF1Q8WXW3 757 aa13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 BADQ92934 168 aa13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 RRP36Q96EU6 259 aaKnown RBP13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 SPZ1Q9BXG8 430 aa13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 LRRC2Q9BYS8 371 aa13.61□□□□□ -0.23
SMIM11A-201ENST00000399292 NR3C2P08235 984 aa13.6□□□□□ -0.23
SMIM11A-201ENST00000399292 EIF2AK2P19525 551 aaKnown RBP13.6□□□□□ -0.23
SMIM11A-201ENST00000399292 CTHP32929 405 aa13.6□□□□□ -0.23
SMIM11A-201ENST00000399292 EXOSC10Q01780 885 aaKnown RBP13.6□□□□□ -0.23
SMIM11A-201ENST00000399292 ITGA7Q13683 1181 aa13.6□□□□□ -0.23
SMIM11A-201ENST00000399292 LRIT3Q3SXY7 679 aa13.6□□□□□ -0.23
SMIM11A-201ENST00000399292 ERICH6BQ5W0A0 696 aa13.6□□□□□ -0.23
SMIM11A-201ENST00000399292 SEPT14Q6ZU15 432 aa13.6□□□□□ -0.23
SMIM11A-201ENST00000399292 SGMS1Q86VZ5 419 aa13.6□□□□□ -0.23
SMIM11A-201ENST00000399292 FANCBQ8NB91 859 aa13.6□□□□□ -0.23
SMIM11A-201ENST00000399292 SEZ6LQ9BYH1 1024 aa13.6□□□□□ -0.23
SMIM11A-201ENST00000399292 PXMP2Q9NR77 195 aa13.6□□□□□ -0.23
SMIM11A-201ENST00000399292 POLR3EQ9NVU0 708 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms