RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SH3GLB2Q9NR46 395 aa16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 KCNH7Q9NS40 1196 aa16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 GJB4Q9NTQ9 266 aa16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 NOP56O00567 594 aaKnown RBP16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 HOXD8P13378 290 aaPredicted RBP16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 KCNA2P16389 499 aa16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 CEP55Q53EZ4 464 aa16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 PPP1R12CQ9BZL4 782 aa16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 DOCK5Q9H7D0 1870 aa16.08■□□□□ 0.17
HLA-DQB1-202ENST00000399079 LTBP2Q14767 1821 aa16.08■□□□□ 0.16
HLA-DQB1-202ENST00000399079 FAM86B1E9PN63 330 aa16.08■□□□□ 0.16
HLA-DQB1-202ENST00000399079 FAM86B2P0C5J1 330 aa16.08■□□□□ 0.16
HLA-DQB1-202ENST00000399079 ARP10275 920 aa16.08■□□□□ 0.16
HLA-DQB1-202ENST00000399079 ST3GAL1Q11201 340 aa16.08■□□□□ 0.16
HLA-DQB1-202ENST00000399079 NPY5RQ15761 445 aa16.08■□□□□ 0.16
HLA-DQB1-202ENST00000399079 KIAA0753Q2KHM9 967 aa16.08■□□□□ 0.16
HLA-DQB1-202ENST00000399079 NFRKBQ6P4R8 1299 aa16.08■□□□□ 0.16
HLA-DQB1-202ENST00000399079 BICD2Q8TD16 824 aa16.08■□□□□ 0.16
HLA-DQB1-202ENST00000399079 CDHR1Q96JP9 859 aa16.08■□□□□ 0.16
HLA-DQB1-202ENST00000399079 UIMC1Q96RL1 719 aa16.08■□□□□ 0.16
HLA-DQB1-202ENST00000399079 GPR20Q99678 358 aa16.08■□□□□ 0.16
HLA-DQB1-202ENST00000399079 C16orf70Q9BSU1 422 aa16.08■□□□□ 0.16
HLA-DQB1-202ENST00000399079 ALG1Q9BT22 464 aa16.08■□□□□ 0.16
HLA-DQB1-202ENST00000399079 SEZ6LQ9BYH1 1024 aa16.08■□□□□ 0.16
HLA-DQB1-202ENST00000399079 KCNJ14Q9UNX9 436 aa16.08■□□□□ 0.16
HLA-DQB1-202ENST00000399079 UMODL1Q5DID0 1318 aa16.07■□□□□ 0.16
HLA-DQB1-202ENST00000399079 MAFGO15525 162 aa16.07■□□□□ 0.16
HLA-DQB1-202ENST00000399079 F2P00734 622 aa16.07■□□□□ 0.16
HLA-DQB1-202ENST00000399079 TIMP1P01033 207 aa16.07■□□□□ 0.16
HLA-DQB1-202ENST00000399079 CYP2C9P11712 490 aa16.07■□□□□ 0.16
HLA-DQB1-202ENST00000399079 FDPSP14324 419 aaKnown RBP16.07■□□□□ 0.16
HLA-DQB1-202ENST00000399079 ZNF76P36508 570 aa16.07■□□□□ 0.16
HLA-DQB1-202ENST00000399079 PSEN2P49810 448 aa16.07■□□□□ 0.16
HLA-DQB1-202ENST00000399079 MFSD10Q14728 455 aa16.07■□□□□ 0.16
HLA-DQB1-202ENST00000399079 ORC3Q9UBD5 711 aaPredicted RBP16.07■□□□□ 0.16
HLA-DQB1-202ENST00000399079 PCDHA4Q9UN74 947 aa16.07■□□□□ 0.16
HLA-DQB1-202ENST00000399079 LIMCH1Q9UPQ0 1083 aa16.07■□□□□ 0.16
HLA-DQB1-202ENST00000399079 STK36Q9NRP7 1315 aa16.07■□□□□ 0.16
HLA-DQB1-202ENST00000399079 HAS3O00219 553 aa16.06■□□□□ 0.16
HLA-DQB1-202ENST00000399079 MEIS1O00470 390 aa16.06■□□□□ 0.16
HLA-DQB1-202ENST00000399079 LGALS2P05162 132 aa16.06■□□□□ 0.16
HLA-DQB1-202ENST00000399079 CYP3A4P08684 503 aa16.06■□□□□ 0.16
HLA-DQB1-202ENST00000399079 CYP2C18P33260 490 aa16.06■□□□□ 0.16
HLA-DQB1-202ENST00000399079 MCTP2Q6DN12 878 aa16.06■□□□□ 0.16
HLA-DQB1-202ENST00000399079 TRIM50Q86XT4 487 aa16.06■□□□□ 0.16
HLA-DQB1-202ENST00000399079 GIMAP8Q8ND71 665 aaPredicted RBP16.06■□□□□ 0.16
HLA-DQB1-202ENST00000399079 NSUN7Q8NE18 718 aaKnown RBP16.06■□□□□ 0.16
HLA-DQB1-202ENST00000399079 HIPK3Q9H422 1215 aa16.06■□□□□ 0.16
HLA-DQB1-202ENST00000399079 HDAC6Q9UBN7 1215 aa16.06■□□□□ 0.16
HLA-DQB1-202ENST00000399079 IGLV3-22A0A075B6J6 115 aa16.05■□□□□ 0.16
HLA-DQB1-202ENST00000399079 H3BRB1 525 aa16.05■□□□□ 0.16
HLA-DQB1-202ENST00000399079 EDIL3O43854 480 aa16.05■□□□□ 0.16
HLA-DQB1-202ENST00000399079 JAK2O60674 1132 aa16.05■□□□□ 0.16
HLA-DQB1-202ENST00000399079 EPHB4P54760 987 aa16.05■□□□□ 0.16
HLA-DQB1-202ENST00000399079 ITGB3BPQ13352 177 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQB1-202ENST00000399079 UTP14CQ5TAP6 766 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB1-202ENST00000399079 GDF6Q6KF10 455 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQB1-202ENST00000399079 TDHQ8IZJ6 230 aa16.05■□□□□ 0.16
HLA-DQB1-202ENST00000399079 BLIDQ8IZY5 108 aa16.05■□□□□ 0.16
HLA-DQB1-202ENST00000399079 C7orf31Q8N865 590 aa16.05■□□□□ 0.16
HLA-DQB1-202ENST00000399079 PHF20Q9BVI0 1012 aa16.05■□□□□ 0.16
HLA-DQB1-202ENST00000399079 NOC4LQ9BVI4 516 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB1-202ENST00000399079 KATNAL1Q9BW62 490 aa16.05■□□□□ 0.16
HLA-DQB1-202ENST00000399079 TUT1Q9H6E5 874 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB1-202ENST00000399079 UPF2Q9HAU5 1272 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB1-202ENST00000399079 AGO4Q9HCK5 861 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB1-202ENST00000399079 A0A1W2PPC1 479 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 M0R2N6 131 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 SUPT20HL2P0C7V6 817 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 TCF7P36402 384 aaPredicted RBP16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 FPGSQ05932 587 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 PTPN11Q06124 597 aaPredicted RBP16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 HIC1Q14526 733 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 PTGISQ16647 500 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 C9orf50Q5SZB4 431 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 MFSD5Q6N075 450 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 PLA2G4DQ86XP0 818 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 CTAGE1Q96RT6 745 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 GTF2IRD1Q9UHL9 959 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 GSTTP1A0A1W2PQM5 241 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 CSF2RAP15509 400 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 FXR1P51114 621 aaKnown RBP eCLIP16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 CCL23P55773 120 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 ZNF200P98182 395 aaPredicted RBP16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 SHHQ15465 462 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 SESTD1Q86VW0 696 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 CCDC83Q8IWF9 413 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 DAGLBQ8NCG7 672 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 OXER1Q8TDS5 423 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 TBCKQ8TEA7 893 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 WNT8AQ9H1J5 351 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 JPH1Q9HDC5 661 aaPredicted RBP16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 SLC9A2Q9UBY0 812 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 NOD1Q9Y239 953 aa16.04■□□□□ 0.16
HLA-DQB1-202ENST00000399079 DDX39AO00148 427 aaKnown RBP16.03■□□□□ 0.16
HLA-DQB1-202ENST00000399079 SOX1O00570 391 aaPredicted RBP16.03■□□□□ 0.16
HLA-DQB1-202ENST00000399079 FOSBP53539 338 aa16.03■□□□□ 0.16
HLA-DQB1-202ENST00000399079 PRR16Q569H4 304 aa16.03■□□□□ 0.16
HLA-DQB1-202ENST00000399079 NIPA1Q7RTP0 329 aa16.03■□□□□ 0.16
HLA-DQB1-202ENST00000399079 SEPT1Q8WYJ6 367 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms