RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 KIRREL3Q8IZU9 778 aa15.92■□□□□ 0.14
RPRD1A-202ENST00000399022 MAGOHBQ96A72 148 aaKnown RBP15.92■□□□□ 0.14
RPRD1A-202ENST00000399022 IL17RAQ96F46 866 aa15.92■□□□□ 0.14
RPRD1A-202ENST00000399022 SCP2P22307 547 aa15.92■□□□□ 0.14
RPRD1A-202ENST00000399022 FYB2Q5VWT5 728 aa15.92■□□□□ 0.14
RPRD1A-202ENST00000399022 P2RX5Q93086 422 aa15.92■□□□□ 0.14
RPRD1A-202ENST00000399022 DBNDD1Q9H9R9 158 aa15.92■□□□□ 0.14
RPRD1A-202ENST00000399022 TFR2Q9UP52 801 aa15.92■□□□□ 0.14
RPRD1A-202ENST00000399022 RPS6KA4O75676 772 aa15.92■□□□□ 0.14
RPRD1A-202ENST00000399022 RPUSD2Q8IZ73 545 aaKnown RBP15.92■□□□□ 0.14
RPRD1A-202ENST00000399022 MYCT1Q8N699 235 aa15.92■□□□□ 0.14
RPRD1A-202ENST00000399022 KCNV2Q8TDN2 545 aa15.92■□□□□ 0.14
RPRD1A-202ENST00000399022 NAP1L4Q99733 375 aaKnown RBP15.92■□□□□ 0.14
RPRD1A-202ENST00000399022 ADD3Q9UEY8 706 aaKnown RBP15.92■□□□□ 0.14
RPRD1A-202ENST00000399022 TRIM37O94972 964 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 MDH1P40925 334 aaKnown RBP15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 UBE2SQ16763 222 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 FAM26FQ5R3K3 315 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 MIPOL1Q8TD10 442 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 TMEM47Q9BQJ4 181 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 SLC40A1Q9NP59 571 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 KIAA1024Q9UPX6 916 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 LGALS16A8MUM7 142 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 GCFC2P16383 781 aaKnown RBP15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 KRT15P19012 456 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 CERKLQ49MI3 558 aaPredicted RBP15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 HHATQ5VTY9 493 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 DGKHQ86XP1 1220 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 CNOT10Q9H9A5 744 aaKnown RBP15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 FAM114A2Q9NRY5 505 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 NARFQ9UHQ1 456 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 SERPINB13Q9UIV8 391 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 H0YIN7 160 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 H2AFZP0C0S5 128 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 ITPK1Q13572 414 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 GRAPQ13588 217 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 SLFN13Q68D06 897 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 H2AFVQ71UI9 128 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 SUGP1Q8IWZ8 645 aaKnown RBP15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 STAG2Q8N3U4 1231 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 SRBD1Q8N5C6 995 aaKnown RBP15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 UBL4BQ8N7F7 174 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 GRAPLQ8TC17 118 aaPredicted RBP15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 KIFC2Q96AC6 838 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 FBXO2Q9UK22 296 aaPredicted RBP15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 RIMS1Q86UR5 1692 aaKnown RBP15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 TXNDC9O14530 226 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 EEF2P13639 858 aaKnown RBP15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 IRX1P78414 480 aaPredicted RBP15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 CCHCR1Q8TD31 782 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 LARP4BQ92615 738 aaKnown RBP15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 PANK4Q9NVE7 773 aa15.91■□□□□ 0.14
RPRD1A-202ENST00000399022 PGRMC1O00264 195 aaKnown RBP15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 CAMTA2O94983 1202 aa15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 MMEP08473 750 aa15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 PFKFB3Q16875 520 aaPredicted RBP15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 GLE1Q53GS7 698 aaKnown RBP15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 PPP4R3AQ6IN85 833 aa15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 CNPY4Q8N129 248 aa15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 DISC1Q9NRI5 854 aa15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 FRMD4BQ9Y2L6 1034 aa15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 PNPLA7Q6ZV29 1317 aa15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 CIB2O75838 187 aa15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 APBA3O96018 575 aa15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 GYPCP04921 128 aa15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 CACNB3P54284 484 aa15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 ICA1Q05084 483 aa15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 NKX1-1Q15270 411 aaPredicted RBP15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 ARHGEF1Q92888 912 aaKnown RBP15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 NT5C3AQ9H0P0 336 aa15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 ARHGEF10LQ9HCE6 1279 aa15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 MAP2K7O14733 419 aa15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 VPS41P49754 854 aa15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 MARCH10Q8NA82 808 aaPredicted RBP15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 ZNF579Q8NAF0 562 aaKnown RBP15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 DHTKD1Q96HY7 919 aaPredicted RBP15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 SH3GL3Q99963 347 aa15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 SMARCAL1Q9NZC9 954 aa15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 BAZ2BQ9UIF8 2168 aaKnown RBP15.9■□□□□ 0.14
RPRD1A-202ENST00000399022 ARHGEF35A5YM69 484 aa15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 UAP1Q16222 522 aaPredicted RBP15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 WDR93Q6P2C0 686 aa15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 ZNF365Q70YC5 407 aa15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 SPATA24Q86W54 205 aa15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 IRAK4Q9NWZ3 460 aa15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 DAAM1Q9Y4D1 1078 aa15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 PPP2R2AP63151 447 aa15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 SLMAPQ14BN4 828 aa15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 GLT8D2Q9H1C3 349 aa15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 PRCPP42785 496 aa15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 PABPC4Q13310 644 aaKnown RBP eCLIP15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 ANKRD20A3Q5VUR7 823 aa15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 LARGE2Q8N3Y3 721 aa15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 ZIM3Q96PE6 472 aa15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 TCHPQ9BT92 498 aa15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 EHD4Q9H223 541 aa15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 ADAMTS1Q9UHI8 967 aa15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 SNX12Q9UMY4 172 aa15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 USH1CQ9Y6N9 552 aa15.89■□□□□ 0.13
RPRD1A-202ENST00000399022 PDHA1P08559 390 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms