RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 POU3F3P20264 500 aaPredicted RBP15.41■□□□□ 0.06
VCX3A-202ENST00000398729 HSPA4P34932 840 aa15.41■□□□□ 0.06
VCX3A-202ENST00000398729 RFC2P35250 354 aa15.41■□□□□ 0.06
VCX3A-202ENST00000398729 KCNQ1P51787 676 aa15.41■□□□□ 0.06
VCX3A-202ENST00000398729 NEDD9Q14511 834 aa15.41■□□□□ 0.06
VCX3A-202ENST00000398729 MFSD10Q14728 455 aa15.41■□□□□ 0.06
VCX3A-202ENST00000398729 KIAA0753Q2KHM9 967 aa15.41■□□□□ 0.06
VCX3A-202ENST00000398729 GDF6Q6KF10 455 aaPredicted RBP15.41■□□□□ 0.06
VCX3A-202ENST00000398729 CCDC155Q8N6L0 562 aa15.41■□□□□ 0.06
VCX3A-202ENST00000398729 CAGE1Q8TC20 777 aa15.41■□□□□ 0.06
VCX3A-202ENST00000398729 KCNB2Q92953 911 aa15.41■□□□□ 0.06
VCX3A-202ENST00000398729 ALG1Q9BT22 464 aa15.41■□□□□ 0.06
VCX3A-202ENST00000398729 HDAC6Q9UBN7 1215 aa15.41■□□□□ 0.06
VCX3A-202ENST00000398729 GTF2IRD1Q9UHL9 959 aa15.41■□□□□ 0.06
VCX3A-202ENST00000398729 MTCH2Q9Y6C9 303 aa15.41■□□□□ 0.06
VCX3A-202ENST00000398729 BRWD1Q9NSI6 2320 aa15.41■□□□□ 0.06
VCX3A-202ENST00000398729 CNTNAP5Q8WYK1 1306 aa15.41■□□□□ 0.06
VCX3A-202ENST00000398729 EPOPA6NHQ4 379 aa15.4■□□□□ 0.06
VCX3A-202ENST00000398729 SPDYE3A6NKU9 549 aa15.4■□□□□ 0.06
VCX3A-202ENST00000398729 HAS3O00219 553 aa15.4■□□□□ 0.06
VCX3A-202ENST00000398729 NOP56O00567 594 aaKnown RBP15.4■□□□□ 0.06
VCX3A-202ENST00000398729 IQCF3P0C7M6 154 aa15.4■□□□□ 0.06
VCX3A-202ENST00000398729 RCAN1P53805 252 aa15.4■□□□□ 0.06
VCX3A-202ENST00000398729 PPP2R2DQ66LE6 453 aa15.4■□□□□ 0.06
VCX3A-202ENST00000398729 BLOC1S2Q6QNY1 142 aa15.4■□□□□ 0.06
VCX3A-202ENST00000398729 DEFB128Q7Z7B8 93 aa15.4■□□□□ 0.06
VCX3A-202ENST00000398729 NLRX1Q86UT6 975 aa15.4■□□□□ 0.06
VCX3A-202ENST00000398729 MICALL1Q8N3F8 863 aa15.4■□□□□ 0.06
VCX3A-202ENST00000398729 FAM122AQ96E09 287 aa15.4■□□□□ 0.06
VCX3A-202ENST00000398729 JAKMIP1Q96N16 626 aaKnown RBP15.4■□□□□ 0.06
VCX3A-202ENST00000398729 NAP1L2Q9ULW6 460 aaPredicted RBP15.4■□□□□ 0.06
VCX3A-202ENST00000398729 TANC1Q9C0D5 1861 aa15.4■□□□□ 0.06
VCX3A-202ENST00000398729 ACTN1P12814 892 aa15.39■□□□□ 0.05
VCX3A-202ENST00000398729 ATP2A2P16615 1042 aaKnown RBP15.39■□□□□ 0.05
VCX3A-202ENST00000398729 UBE2SQ16763 222 aa15.39■□□□□ 0.05
VCX3A-202ENST00000398729 KRT40Q6A162 431 aa15.39■□□□□ 0.05
VCX3A-202ENST00000398729 METTL7BQ6UX53 244 aa15.39■□□□□ 0.05
VCX3A-202ENST00000398729 IL27Q8NEV9 243 aa15.39■□□□□ 0.05
VCX3A-202ENST00000398729 TSPYL2Q9H2G4 693 aaPredicted RBP15.39■□□□□ 0.05
VCX3A-202ENST00000398729 EPHX3Q9H6B9 360 aa15.39■□□□□ 0.05
VCX3A-202ENST00000398729 EHMT1Q9H9B1 1298 aa15.39■□□□□ 0.05
VCX3A-202ENST00000398729 SNX14Q9Y5W7 946 aa15.39■□□□□ 0.05
VCX3A-202ENST00000398729 SCN5AQ14524 2016 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 CCDC196A0A1B0GTZ2 297 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 ZBBXA8MT70 800 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 hCG_1984214I3L0E3 225 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 ARHGEF15O94989 841 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 CPA1P15085 419 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 PSMA5P28066 241 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 NAPAP54920 295 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 FUT2Q10981 343 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 SEMA3FQ13275 785 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 WWC2Q6AWC2 1192 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 Q6ZUG5 572 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 CYFIP1Q7L576 1253 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 TEX2Q8IWB9 1127 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 ZNF713Q8N859 430 aaPredicted RBP15.38■□□□□ 0.05
VCX3A-202ENST00000398729 GIMAP8Q8ND71 665 aaPredicted RBP15.38■□□□□ 0.05
VCX3A-202ENST00000398729 AFAP1L1Q8TED9 768 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 GPRASP2Q96D09 838 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 CDHR1Q96JP9 859 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 SENP7Q9BQF6 1050 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 C16orf70Q9BSU1 422 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 C1QTNF1Q9BXJ1 281 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 CERS4Q9HA82 394 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 PCDHA6Q9UN73 950 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 PCDHA8Q9Y5H6 950 aa15.38■□□□□ 0.05
VCX3A-202ENST00000398729 V9GY48 417 aaPredicted RBP15.38■□□□□ 0.05
VCX3A-202ENST00000398729 TRIP12Q14669 1992 aaPredicted RBP15.38■□□□□ 0.05
VCX3A-202ENST00000398729 H3BRB1 525 aa15.37■□□□□ 0.05
VCX3A-202ENST00000398729 EPB41L2O43491 1005 aaKnown RBP15.37■□□□□ 0.05
VCX3A-202ENST00000398729 TLL1O43897 1013 aa15.37■□□□□ 0.05
VCX3A-202ENST00000398729 LGALS2P05162 132 aa15.37■□□□□ 0.05
VCX3A-202ENST00000398729 CA3P07451 260 aa15.37■□□□□ 0.05
VCX3A-202ENST00000398729 HOXD11P31277 338 aaPredicted RBP15.37■□□□□ 0.05
VCX3A-202ENST00000398729 METAP2P50579 478 aaKnown RBP eCLIP15.37■□□□□ 0.05
VCX3A-202ENST00000398729 PTK7Q13308 1070 aa15.37■□□□□ 0.05
VCX3A-202ENST00000398729 PPP1R18Q6NYC8 613 aa15.37■□□□□ 0.05
VCX3A-202ENST00000398729 BRF1Q92994 677 aa15.37■□□□□ 0.05
VCX3A-202ENST00000398729 CTAGE1Q96RT6 745 aa15.37■□□□□ 0.05
VCX3A-202ENST00000398729 LRFN3Q9BTN0 628 aa15.37■□□□□ 0.05
VCX3A-202ENST00000398729 USP26Q9BXU7 913 aa15.37■□□□□ 0.05
VCX3A-202ENST00000398729 FTOQ9C0B1 505 aaKnown RBP eCLIP15.37■□□□□ 0.05
VCX3A-202ENST00000398729 TUT1Q9H6E5 874 aaKnown RBP15.37■□□□□ 0.05
VCX3A-202ENST00000398729 BCAS3Q9H6U6 928 aa15.37■□□□□ 0.05
VCX3A-202ENST00000398729 FAM217BQ9NTX9 383 aaPredicted RBP15.37■□□□□ 0.05
VCX3A-202ENST00000398729 DOCK5Q9H7D0 1870 aa15.37■□□□□ 0.05
VCX3A-202ENST00000398729 PARNO95453 639 aaKnown RBP15.36■□□□□ 0.05
VCX3A-202ENST00000398729 CKBP12277 381 aa15.36■□□□□ 0.05
VCX3A-202ENST00000398729 SELPP16109 830 aa15.36■□□□□ 0.05
VCX3A-202ENST00000398729 RPS6KB1P23443 525 aa15.36■□□□□ 0.05
VCX3A-202ENST00000398729 CDC27P30260 824 aa15.36■□□□□ 0.05
VCX3A-202ENST00000398729 RBL2Q08999 1139 aa15.36■□□□□ 0.05
VCX3A-202ENST00000398729 APOBRQ0VD83 1088 aa15.36■□□□□ 0.05
VCX3A-202ENST00000398729 MTMR1Q13613 665 aa15.36■□□□□ 0.05
VCX3A-202ENST00000398729 LRRC8DQ7L1W4 858 aa15.36■□□□□ 0.05
VCX3A-202ENST00000398729 TET1Q8NFU7 2136 aa15.36■□□□□ 0.05
VCX3A-202ENST00000398729 DHX38Q92620 1227 aaKnown RBP15.36■□□□□ 0.05
VCX3A-202ENST00000398729 GPR20Q99678 358 aa15.36■□□□□ 0.05
VCX3A-202ENST00000398729 GLT8D2Q9H1C3 349 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms