RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 TMOD4Q9NZQ9 345 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 GDAQ9Y2T3 454 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 ATP8B3O60423 1300 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 LOC102724159A0A0B4J2E5 919 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 RAD21O60216 631 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 SFNP31947 248 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 MYBPC2Q14324 1141 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 PWP2Q15269 919 aaKnown RBP8.21□□□□□ -1.09
RGPD1-201ENST00000398193 CYP26C1Q6V0L0 522 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 OTOP1Q7RTM1 612 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 TMEM139Q8IV31 216 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 KIAA0895Q8NCT3 520 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 GPRASP2Q96D09 838 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 PPP1R13BQ96KQ4 1090 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 NACC1Q96RE7 527 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 OLFML3Q9NRN5 406 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 EMILIN3Q9NT22 766 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 NFASCO94856 1347 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 PTPRAP18433 802 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 VCAM1P19320 739 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 CCND2P30279 289 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 MCCD1P59942 119 aaPredicted RBP8.21□□□□□ -1.1
RGPD1-201ENST00000398193 HSP90AA2PQ14568 343 aaPredicted RBP8.21□□□□□ -1.1
RGPD1-201ENST00000398193 CCDC174Q6PII3 467 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 CSGALNACT2Q8N6G5 542 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 REPS2Q8NFH8 660 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 GOLGA5Q8TBA6 731 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 ZC3H15Q8WU90 426 aaKnown RBP8.21□□□□□ -1.1
RGPD1-201ENST00000398193 GTF3C2Q8WUA4 911 aaPredicted RBP8.21□□□□□ -1.1
RGPD1-201ENST00000398193 DNAJC7Q99615 494 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 EIF2AK1Q9BQI3 630 aaKnown RBP8.21□□□□□ -1.1
RGPD1-201ENST00000398193 JADE2Q9NQC1 790 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 CAPN11Q9UMQ6 739 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 N4BP3O15049 544 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 SPATA31C1P0DKV0 1188 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 PTPN14Q15678 1187 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 LBX2Q6XYB7 198 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 EPM2AIP1Q7L775 607 aaPredicted RBP8.21□□□□□ -1.1
RGPD1-201ENST00000398193 MTERF4Q7Z6M4 381 aaKnown RBP8.21□□□□□ -1.1
RGPD1-201ENST00000398193 GPBP1Q86WP2 473 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 CATSPER3Q86XQ3 398 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 KCNN1Q92952 543 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 L3MBTL3Q96JM7 780 aaPredicted RBP8.21□□□□□ -1.1
RGPD1-201ENST00000398193 MYO1AQ9UBC5 1043 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 PPME1Q9Y570 386 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 RLFQ13129 1914 aa8.21□□□□□ -1.1
RGPD1-201ENST00000398193 SCN4AP35499 1836 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 MAN2A1Q16706 1144 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 ZCWPW2Q504Y3 356 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 FAM26FQ5R3K3 315 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 CEP135Q66GS9 1140 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 KLHL10Q6JEL2 608 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 USP50Q70EL3 339 aaPredicted RBP8.2□□□□□ -1.1
RGPD1-201ENST00000398193 MIGA2Q7L4E1 593 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 CHST13Q8NET6 341 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 IWS1Q96ST2 819 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 SRRTQ9BXP5 876 aaKnown RBP8.2□□□□□ -1.1
RGPD1-201ENST00000398193 HOXC10Q9NYD6 342 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 KIAA1024Q9UPX6 916 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 CYP11B2P19099 503 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 GUCY2CP25092 1073 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 LRMPQ12912 555 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 LRCH2Q5VUJ6 765 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 SYN2Q92777 582 aaPredicted RBP8.2□□□□□ -1.1
RGPD1-201ENST00000398193 KLRG1Q96E93 195 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 CDHR1Q96JP9 859 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 HSD17B14Q9BPX1 270 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 RPAP3Q9H6T3 665 aaPredicted RBP8.2□□□□□ -1.1
RGPD1-201ENST00000398193 AFG3L2Q9Y4W6 797 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 COL4A3BPQ9Y5P4 624 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 OTOFQ9HC10 1997 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 MED24O75448 989 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 ECM1Q16610 540 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 NCAPH2Q6IBW4 605 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 CATSPERGQ6ZRH7 1159 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 NLRX1Q86UT6 975 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 PROCA1Q8NCQ7 364 aaPredicted RBP8.2□□□□□ -1.1
RGPD1-201ENST00000398193 ZNF397Q8NF99 534 aaPredicted RBP8.2□□□□□ -1.1
RGPD1-201ENST00000398193 AGO4Q9HCK5 861 aaKnown RBP8.2□□□□□ -1.1
RGPD1-201ENST00000398193 KCNG1Q9UIX4 513 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 TRAF3IP3Q9Y228 551 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 GJA3Q9Y6H8 435 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.2□□□□□ -1.1
RGPD1-201ENST00000398193 VWA5AO00534 786 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 PDXKO00764 312 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 INPP5BP32019 993 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 TUBB4BP68371 445 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 DNTTIP2Q5QJE6 756 aaKnown RBP8.2□□□□□ -1.1
RGPD1-201ENST00000398193 ANKRD40Q6AI12 368 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 CCDC84Q86UT8 332 aaPredicted RBP8.2□□□□□ -1.1
RGPD1-201ENST00000398193 CNOT6LQ96LI5 555 aaKnown RBP8.2□□□□□ -1.1
RGPD1-201ENST00000398193 SEMA6BQ9H3T3 888 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 TNNT1P13805 278 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 CASP1P29466 404 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 CDC25AP30304 524 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 VWA3BQ502W6 1294 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 IRF2BP1Q8IU81 584 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 FMNL3Q8IVF7 1028 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 HVCN1Q96D96 273 aa8.2□□□□□ -1.1
RGPD1-201ENST00000398193 ZNF577Q9BSK1 485 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms