RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 MXRA8Q9BRK3 442 aa19.1■□□□□ 0.65
APTR-201ENST00000398043 C6orf50Q9HD87 102 aa19.1■□□□□ 0.65
APTR-201ENST00000398043 GBF1Q92538 1859 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 MEIS1O00470 390 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 CPLX1O14810 134 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 EDIL3O43854 480 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 DEXIO95424 95 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 CYP3A4P08684 503 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 PSEN2P49810 448 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 NEK4P51957 841 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 ARHGAP4P98171 946 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 MTMR1Q13613 665 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 SHHQ15465 462 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 ME3Q16798 604 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 C9orf50Q5SZB4 431 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 JAKMIP3Q5VZ66 844 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 C16orf59Q7L2K0 433 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 TRIM22Q8IYM9 498 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 VWCEQ96DN2 955 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 CDHR1Q96JP9 859 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 AIFM3Q96NN9 605 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 WNT8AQ9H1J5 351 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 SLKQ9H2G2 1235 aaPredicted RBP19.09■□□□□ 0.65
APTR-201ENST00000398043 HIPK3Q9H422 1215 aa19.09■□□□□ 0.65
APTR-201ENST00000398043 M0R2N6 131 aa19.08■□□□□ 0.64
APTR-201ENST00000398043 SUPT20HL2P0C7V6 817 aa19.08■□□□□ 0.64
APTR-201ENST00000398043 CYP2C9P11712 490 aa19.08■□□□□ 0.64
APTR-201ENST00000398043 GNA11P29992 359 aa19.08■□□□□ 0.64
APTR-201ENST00000398043 CYP2C18P33260 490 aa19.08■□□□□ 0.64
APTR-201ENST00000398043 FPGSQ05932 587 aa19.08■□□□□ 0.64
APTR-201ENST00000398043 HIC1Q14526 733 aa19.08■□□□□ 0.64
APTR-201ENST00000398043 MFSD10Q14728 455 aa19.08■□□□□ 0.64
APTR-201ENST00000398043 CEP55Q53EZ4 464 aa19.08■□□□□ 0.64
APTR-201ENST00000398043 MCTP2Q6DN12 878 aa19.08■□□□□ 0.64
APTR-201ENST00000398043 GDF6Q6KF10 455 aaPredicted RBP19.08■□□□□ 0.64
APTR-201ENST00000398043 REXO1Q8N1G1 1221 aaKnown RBP19.08■□□□□ 0.64
APTR-201ENST00000398043 GIMAP8Q8ND71 665 aaPredicted RBP19.08■□□□□ 0.64
APTR-201ENST00000398043 CCDC148Q8NFR7 591 aa19.08■□□□□ 0.64
APTR-201ENST00000398043 KATNAL1Q9BW62 490 aa19.08■□□□□ 0.64
APTR-201ENST00000398043 PPP1R12CQ9BZL4 782 aa19.08■□□□□ 0.64
APTR-201ENST00000398043 KCNH7Q9NS40 1196 aa19.08■□□□□ 0.64
APTR-201ENST00000398043 GTF2IRD1Q9UHL9 959 aa19.08■□□□□ 0.64
APTR-201ENST00000398043 STK36Q9NRP7 1315 aa19.07■□□□□ 0.64
APTR-201ENST00000398043 IGLV3-22A0A075B6J6 115 aa19.07■□□□□ 0.64
APTR-201ENST00000398043 SLC34A2O95436 690 aa19.07■□□□□ 0.64
APTR-201ENST00000398043 LGALS2P05162 132 aa19.07■□□□□ 0.64
APTR-201ENST00000398043 ARP10275 920 aa19.07■□□□□ 0.64
APTR-201ENST00000398043 CSF2RAP15509 400 aa19.07■□□□□ 0.64
APTR-201ENST00000398043 HOXC8P31273 242 aa19.07■□□□□ 0.64
APTR-201ENST00000398043 KIAA0753Q2KHM9 967 aa19.07■□□□□ 0.64
APTR-201ENST00000398043 FAM47CQ5HY64 1035 aa19.07■□□□□ 0.64
APTR-201ENST00000398043 NIPA1Q7RTP0 329 aa19.07■□□□□ 0.64
APTR-201ENST00000398043 FAM177A1Q8N128 213 aaPredicted RBP19.07■□□□□ 0.64
APTR-201ENST00000398043 RASGRP4Q8TDF6 673 aa19.07■□□□□ 0.64
APTR-201ENST00000398043 HDAC6Q9UBN7 1215 aa19.07■□□□□ 0.64
APTR-201ENST00000398043 GSTTP1A0A1W2PQM5 241 aa19.06■□□□□ 0.64
APTR-201ENST00000398043 FAM86B1E9PN63 330 aa19.06■□□□□ 0.64
APTR-201ENST00000398043 FAM86B2P0C5J1 330 aa19.06■□□□□ 0.64
APTR-201ENST00000398043 RBM25P49756 843 aaKnown RBP19.06■□□□□ 0.64
APTR-201ENST00000398043 ST3GAL1Q11201 340 aa19.06■□□□□ 0.64
APTR-201ENST00000398043 CPLX2Q6PUV4 134 aaKnown RBP19.06■□□□□ 0.64
APTR-201ENST00000398043 DAGLBQ8NCG7 672 aa19.06■□□□□ 0.64
APTR-201ENST00000398043 LRCH3Q96II8 777 aa19.06■□□□□ 0.64
APTR-201ENST00000398043 LOXHD1Q8IVV2 1947 aa19.06■□□□□ 0.64
APTR-201ENST00000398043 NFASCO94856 1347 aa19.05■□□□□ 0.64
APTR-201ENST00000398043 EVPLQ92817 2033 aa19.05■□□□□ 0.64
APTR-201ENST00000398043 H3BRB1 525 aa19.05■□□□□ 0.64
APTR-201ENST00000398043 NOP56O00567 594 aaKnown RBP19.05■□□□□ 0.64
APTR-201ENST00000398043 DTNBO60941 627 aa19.05■□□□□ 0.64
APTR-201ENST00000398043 FDPSP14324 419 aaKnown RBP19.05■□□□□ 0.64
APTR-201ENST00000398043 CIITAP33076 1130 aa19.05■□□□□ 0.64
APTR-201ENST00000398043 RBL2Q08999 1139 aa19.05■□□□□ 0.64
APTR-201ENST00000398043 ITGB3BPQ13352 177 aaPredicted RBP19.05■□□□□ 0.64
APTR-201ENST00000398043 PTGISQ16647 500 aa19.05■□□□□ 0.64
APTR-201ENST00000398043 TMEM199Q8N511 208 aa19.05■□□□□ 0.64
APTR-201ENST00000398043 NECAB1Q8N987 351 aa19.05■□□□□ 0.64
APTR-201ENST00000398043 BICD2Q8TD16 824 aa19.05■□□□□ 0.64
APTR-201ENST00000398043 DHX38Q92620 1227 aaKnown RBP19.05■□□□□ 0.64
APTR-201ENST00000398043 GTF3C6Q969F1 213 aa19.05■□□□□ 0.64
APTR-201ENST00000398043 ALG1Q9BT22 464 aa19.05■□□□□ 0.64
APTR-201ENST00000398043 TUT1Q9H6E5 874 aaKnown RBP19.05■□□□□ 0.64
APTR-201ENST00000398043 AGO4Q9HCK5 861 aaKnown RBP19.05■□□□□ 0.64
APTR-201ENST00000398043 PCDHA4Q9UN74 947 aa19.05■□□□□ 0.64
APTR-201ENST00000398043 PTPRSQ13332 1948 aa19.05■□□□□ 0.64
APTR-201ENST00000398043 SIP14410 1827 aa19.04■□□□□ 0.64
APTR-201ENST00000398043 PITPNM1O00562 1244 aa19.04■□□□□ 0.64
APTR-201ENST00000398043 CDKL5O76039 1030 aa19.04■□□□□ 0.64
APTR-201ENST00000398043 NLRP5P59047 1200 aa19.04■□□□□ 0.64
APTR-201ENST00000398043 PPIGQ13427 754 aaKnown RBP eCLIP19.04■□□□□ 0.64
APTR-201ENST00000398043 TMEM240Q5SV17 173 aa19.04■□□□□ 0.64
APTR-201ENST00000398043 RASIP1Q5U651 963 aa19.04■□□□□ 0.64
APTR-201ENST00000398043 TRIM50Q86XT4 487 aa19.04■□□□□ 0.64
APTR-201ENST00000398043 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.04■□□□□ 0.64
APTR-201ENST00000398043 PHF20Q9BVI0 1012 aa19.04■□□□□ 0.64
APTR-201ENST00000398043 MYO9BQ13459 2157 aa19.03■□□□□ 0.64
APTR-201ENST00000398043 DHX15O43143 795 aaKnown RBP19.03■□□□□ 0.64
APTR-201ENST00000398043 TCF7P36402 384 aaPredicted RBP19.03■□□□□ 0.64
APTR-201ENST00000398043 CCL23P55773 120 aa19.03■□□□□ 0.64
APTR-201ENST00000398043 CHMP4BP1P59074 171 aa19.03■□□□□ 0.64
APTR-201ENST00000398043 ZNF200P98182 395 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms