RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 GPR85P60893 370 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 ERVK-24P63145 666 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 KIF23Q02241 960 aaPredicted RBP2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 ID3Q02535 119 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 PPFIA1Q13136 1202 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 UBAP2LQ14157 1087 aaKnown RBP2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 ZNF174Q15697 407 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 NKG7Q16617 165 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 CCDC96Q2M329 555 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 UAP1L1Q3KQV9 507 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 CCDC38Q502W7 563 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 PRR16Q569H4 304 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 ATAT1Q5SQI0 421 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 RNF220Q5VTB9 566 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 PRAMEF13Q5VWM6 474 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 TTLL5Q6EMB2 1281 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 FAAH2Q6GMR7 532 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 FAM180BQ6P0A1 224 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 LILRA6Q6PI73 481 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 IGF2-ASQ6U949 168 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 C1orf229Q6ZS94 237 aaPredicted RBP2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 OTOP3Q7RTS5 596 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 OVCH2Q7RTZ1 564 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 PTRH1Q86Y79 214 aaKnown RBP2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 KRTAP1-3Q8IUG1 177 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 DENND1CQ8IV53 801 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 ANKRD18AQ8IVF6 992 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 Q8N3U1 123 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 OR2C3Q8N628 320 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 EFHBQ8N7U6 833 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 GALNT6Q8NCL4 622 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 SYTL5Q8TDW5 730 aaPredicted RBP2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 SNRNP27Q8WVK2 155 aaKnown RBP2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 JADE3Q92613 823 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 HPS3Q969F9 1004 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 GTPBP3Q969Y2 492 aaKnown RBP2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 C1orf159Q96HA4 380 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 GMCL1Q96IK5 515 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 PSMG3-AS1Q96PY0 264 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 LPIN3Q9BQK8 851 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 WDR18Q9BV38 432 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 CARD10Q9BWT7 1032 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 CELF4Q9BZC1 486 aaKnown RBP2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 NUP62CLQ9H1M0 184 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 CERS4Q9HA82 394 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 PRDM6Q9NQX0 595 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 TOPORSQ9NS56 1045 aaPredicted RBP2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 TOMM22Q9NS69 142 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 CCM2LQ9NUG4 571 aaPredicted RBP2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 NDFIP2Q9NV92 336 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 GPRC5BQ9NZH0 403 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 PGAP2Q9UHJ9 254 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 CDC23Q9UJX2 597 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 GDF2Q9UK05 429 aaPredicted RBP2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 NAGPAQ9UK23 515 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 TPCN1Q9ULQ1 816 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 PHF24Q9UPV7 400 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 SF3B6Q9Y3B4 125 aaKnown RBP2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 AFG3L2Q9Y4W6 797 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 CTDP1Q9Y5B0 961 aaPredicted RBP2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 PCDHA11Q9Y5I1 949 aa2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 LRRFIP2Q9Y608 721 aaKnown RBP2.52□□□□□ -2.01
HMGN2P39-201ENST00000398005 RHPN2P1A8MT19 583 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 SHISA8B8ZZ34 492 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 M0R3H8 397 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 STXBP3O00186 592 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 FSCN2O14926 492 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 OIP5O43482 229 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 TGM5O43548 720 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 KDM1AO60341 852 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 DTNBO60941 627 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 AOC2O75106 756 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 SIN3BO75182 1162 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 TUSC2O75896 110 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 RGS9O75916 674 aaPredicted RBP2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 CST3P01034 146 aaPredicted RBP2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 HRGP04196 525 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 IFIT1P09914 478 aaKnown RBP2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 FURINP09958 794 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 VDRP11473 427 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 OSMP13725 252 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 HOXB4P17483 251 aaPredicted RBP2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 ABCB4P21439 1286 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 TNFSF4P23510 183 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 COL8A1P27658 744 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 CALRP27797 417 aaKnown RBP2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 PPM1AP35813 382 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 PRIM2P49643 509 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 MECP2P51608 486 aaKnown RBP2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 MAPK10P53779 464 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 CACNB3P54284 484 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 ADKP55263 362 aaKnown RBP2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 PCBP4P57723 403 aaKnown RBP2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 CTBSQ01459 385 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 ICA1Q05084 483 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 RING1Q06587 406 aa2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 G3BP1Q13283 466 aaKnown RBP eCLIP2.51□□□□□ -2.01
HMGN2P39-201ENST00000398005 SEMA5AQ13591 1074 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms