RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 SKIV2LQ15477 1246 aaKnown RBP16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 PCNX4Q63HM2 1172 aa16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 XRRA1Q6P2D8 792 aa16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 TRAF7Q6Q0C0 670 aa16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 ATP6V0A1Q93050 837 aa16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 USP26Q9BXU7 913 aa16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 LSG1Q9H089 658 aaKnown RBP16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 RTEL1Q9NZ71 1219 aa16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 MTCH2Q9Y6C9 303 aa16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 EPOPA6NHQ4 379 aa16.45■□□□□ 0.22
SNRNP25-203ENST00000397876 RSPH10B2B2RC85 870 aa16.45■□□□□ 0.22
SNRNP25-203ENST00000397876 PIK3CDO00329 1044 aa16.45■□□□□ 0.22
SNRNP25-203ENST00000397876 SLC27A2O14975 620 aa16.45■□□□□ 0.22
SNRNP25-203ENST00000397876 LGR5O75473 907 aa16.45■□□□□ 0.22
SNRNP25-203ENST00000397876 PLEKHA8P1O95397 391 aa16.45■□□□□ 0.22
SNRNP25-203ENST00000397876 RSPH10BP0C881 870 aa16.45■□□□□ 0.22
SNRNP25-203ENST00000397876 SMIM10L2AP0DMW4 78 aa16.45■□□□□ 0.22
SNRNP25-203ENST00000397876 SMIM10L2BP0DMW5 78 aa16.45■□□□□ 0.22
SNRNP25-203ENST00000397876 SEMA3FQ13275 785 aa16.45■□□□□ 0.22
SNRNP25-203ENST00000397876 HIC1Q14526 733 aa16.45■□□□□ 0.22
SNRNP25-203ENST00000397876 USP17L6PQ6QN14 398 aa16.45■□□□□ 0.22
SNRNP25-203ENST00000397876 CYFIP1Q7L576 1253 aa16.45■□□□□ 0.22
SNRNP25-203ENST00000397876 TMCO2Q7Z6W1 182 aaPredicted RBP16.45■□□□□ 0.22
SNRNP25-203ENST00000397876 NLRX1Q86UT6 975 aa16.45■□□□□ 0.22
SNRNP25-203ENST00000397876 ADAMTS19Q8TE59 1207 aa16.45■□□□□ 0.22
SNRNP25-203ENST00000397876 ESYT1Q9BSJ8 1104 aa16.45■□□□□ 0.22
SNRNP25-203ENST00000397876 ZNF215Q9UL58 517 aaPredicted RBP16.45■□□□□ 0.22
SNRNP25-203ENST00000397876 TRANK1O15050 2925 aa16.45■□□□□ 0.22
SNRNP25-203ENST00000397876 COL4A4P53420 1690 aaPredicted RBP16.44■□□□□ 0.22
SNRNP25-203ENST00000397876 LCHNA4D1U4 455 aa16.44■□□□□ 0.22
SNRNP25-203ENST00000397876 MEIS2O14770 477 aa16.44■□□□□ 0.22
SNRNP25-203ENST00000397876 GJB5O95377 273 aa16.44■□□□□ 0.22
SNRNP25-203ENST00000397876 GNAT1P11488 350 aa16.44■□□□□ 0.22
SNRNP25-203ENST00000397876 HOXC8P31273 242 aa16.44■□□□□ 0.22
SNRNP25-203ENST00000397876 LIFRP42702 1097 aa16.44■□□□□ 0.22
SNRNP25-203ENST00000397876 MBTPS1Q14703 1052 aa16.44■□□□□ 0.22
SNRNP25-203ENST00000397876 AAK1Q2M2I8 961 aa16.44■□□□□ 0.22
SNRNP25-203ENST00000397876 TCTN1Q2MV58 587 aa16.44■□□□□ 0.22
SNRNP25-203ENST00000397876 SRBD1Q8N5C6 995 aaKnown RBP16.44■□□□□ 0.22
SNRNP25-203ENST00000397876 RAD9AQ99638 391 aa16.44■□□□□ 0.22
SNRNP25-203ENST00000397876 GPR20Q99678 358 aa16.44■□□□□ 0.22
SNRNP25-203ENST00000397876 BCAS3Q9H6U6 928 aa16.44■□□□□ 0.22
SNRNP25-203ENST00000397876 ANO2Q9NQ90 1003 aa16.44■□□□□ 0.22
SNRNP25-203ENST00000397876 SLC12A7Q9Y666 1083 aa16.44■□□□□ 0.22
SNRNP25-203ENST00000397876 PRRC2BQ5JSZ5 2229 aaKnown RBP16.43■□□□□ 0.22
SNRNP25-203ENST00000397876 CAND2O75155 1236 aa16.43■□□□□ 0.22
SNRNP25-203ENST00000397876 RXRAP19793 462 aa16.43■□□□□ 0.22
SNRNP25-203ENST00000397876 SP4Q02446 784 aa16.43■□□□□ 0.22
SNRNP25-203ENST00000397876 GRB10Q13322 594 aa16.43■□□□□ 0.22
SNRNP25-203ENST00000397876 CREB3L3Q68CJ9 461 aa16.43■□□□□ 0.22
SNRNP25-203ENST00000397876 GIMAP8Q8ND71 665 aaPredicted RBP16.43■□□□□ 0.22
SNRNP25-203ENST00000397876 UHRF1Q96T88 793 aaPredicted RBP16.43■□□□□ 0.22
SNRNP25-203ENST00000397876 SENP7Q9BQF6 1050 aa16.43■□□□□ 0.22
SNRNP25-203ENST00000397876 DOCK5Q9H7D0 1870 aa16.42■□□□□ 0.22
SNRNP25-203ENST00000397876 TREHO43280 583 aa16.42■□□□□ 0.22
SNRNP25-203ENST00000397876 AMHP03971 560 aa16.42■□□□□ 0.22
SNRNP25-203ENST00000397876 UTP14CQ5TAP6 766 aaKnown RBP16.42■□□□□ 0.22
SNRNP25-203ENST00000397876 FAM117BQ6P1L5 589 aa16.42■□□□□ 0.22
SNRNP25-203ENST00000397876 SPRED2Q7Z698 418 aa16.42■□□□□ 0.22
SNRNP25-203ENST00000397876 TRIM50Q86XT4 487 aa16.42■□□□□ 0.22
SNRNP25-203ENST00000397876 CMTR1Q8N1G2 835 aaKnown RBP16.42■□□□□ 0.22
SNRNP25-203ENST00000397876 DBF4BQ8NFT6 615 aa16.42■□□□□ 0.22
SNRNP25-203ENST00000397876 GPRASP2Q96D09 838 aa16.42■□□□□ 0.22
SNRNP25-203ENST00000397876 CDHR1Q96JP9 859 aa16.42■□□□□ 0.22
SNRNP25-203ENST00000397876 RNPEPQ9H4A4 650 aa16.42■□□□□ 0.22
SNRNP25-203ENST00000397876 PSTPIP2Q9H939 334 aa16.42■□□□□ 0.22
SNRNP25-203ENST00000397876 SPDYE3A6NKU9 549 aa16.41■□□□□ 0.22
SNRNP25-203ENST00000397876 CTSHP09668 335 aa16.41■□□□□ 0.22
SNRNP25-203ENST00000397876 NECTIN1Q15223 517 aa16.41■□□□□ 0.22
SNRNP25-203ENST00000397876 RNF20Q5VTR2 975 aa16.41■□□□□ 0.22
SNRNP25-203ENST00000397876 KRT40Q6A162 431 aa16.41■□□□□ 0.22
SNRNP25-203ENST00000397876 TMTC3Q6ZXV5 915 aa16.41■□□□□ 0.22
SNRNP25-203ENST00000397876 MICU3Q86XE3 530 aa16.41■□□□□ 0.22
SNRNP25-203ENST00000397876 RAB11FIP4Q86YS3 637 aa16.41■□□□□ 0.22
SNRNP25-203ENST00000397876 MYOCDQ8IZQ8 938 aa16.41■□□□□ 0.22
SNRNP25-203ENST00000397876 GDPD5Q8WTR4 605 aa16.41■□□□□ 0.22
SNRNP25-203ENST00000397876 SEPT8Q92599 483 aa16.41■□□□□ 0.22
SNRNP25-203ENST00000397876 TGS1Q96RS0 853 aaKnown RBP16.41■□□□□ 0.22
SNRNP25-203ENST00000397876 LRRC2Q9BYS8 371 aa16.41■□□□□ 0.22
SNRNP25-203ENST00000397876 SETD4Q9NVD3 440 aa16.41■□□□□ 0.22
SNRNP25-203ENST00000397876 COG5Q9UP83 839 aa16.41■□□□□ 0.22
SNRNP25-203ENST00000397876 MICAL3Q7RTP6 2002 aa16.4■□□□□ 0.22
SNRNP25-203ENST00000397876 LINC01553A4QN01 128 aa16.4■□□□□ 0.22
SNRNP25-203ENST00000397876 ARHGAP4P98171 946 aa16.4■□□□□ 0.22
SNRNP25-203ENST00000397876 TFF2Q03403 129 aa16.4■□□□□ 0.22
SNRNP25-203ENST00000397876 COL9A3Q14050 684 aaPredicted RBP16.4■□□□□ 0.22
SNRNP25-203ENST00000397876 PLEKHG4Q58EX7 1191 aa16.4■□□□□ 0.22
SNRNP25-203ENST00000397876 SYNE3Q6ZMZ3 975 aa16.4■□□□□ 0.22
SNRNP25-203ENST00000397876 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.4■□□□□ 0.222e-7■■■■■ 81.2
SNRNP25-203ENST00000397876 HEATR3Q7Z4Q2 680 aa16.4■□□□□ 0.22
SNRNP25-203ENST00000397876 FANCBQ8NB91 859 aa16.4■□□□□ 0.22
SNRNP25-203ENST00000397876 EHMT1Q9H9B1 1298 aa16.4■□□□□ 0.22
SNRNP25-203ENST00000397876 LMCD1Q9NZU5 365 aa16.4■□□□□ 0.22
SNRNP25-203ENST00000397876 MTUS1Q9ULD2 1270 aa16.4■□□□□ 0.22
SNRNP25-203ENST00000397876 INSL6Q9Y581 213 aa16.4■□□□□ 0.22
SNRNP25-203ENST00000397876 hCG_1642624A0A1W2PR95 340 aa16.39■□□□□ 0.21
SNRNP25-203ENST00000397876 LPXNO60711 386 aa16.39■□□□□ 0.21
SNRNP25-203ENST00000397876 TCF7P36402 384 aaPredicted RBP16.39■□□□□ 0.21
SNRNP25-203ENST00000397876 ERVK-21P61565 698 aa16.39■□□□□ 0.21
SNRNP25-203ENST00000397876 MTMR1Q13613 665 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms