RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 SNHG28P0DPA3 235 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 CUL1Q13616 776 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 ZNF174Q15697 407 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 ANKRD42Q8N9B4 389 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 IRAK4Q9NWZ3 460 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 MTRF1LQ9UGC7 380 aaKnown RBP5.97□□□□□ -1.45
PTPRD-205ENST00000397611 MCM7P33993 719 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 CRKLP46109 303 aaKnown RBP5.97□□□□□ -1.45
PTPRD-205ENST00000397611 FAM26FQ5R3K3 315 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 FBXW10Q5XX13 1052 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 TRIM59Q8IWR1 403 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 LRRN4CLQ8ND94 238 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 FLT1P17948 1338 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 LRRD1A4D1F6 860 aa5.96□□□□□ -1.45
PTPRD-205ENST00000397611 CEP104O60308 925 aa5.96□□□□□ -1.45
PTPRD-205ENST00000397611 TFAP4Q01664 338 aa5.96□□□□□ -1.45
PTPRD-205ENST00000397611 INTS5Q6P9B9 1019 aaKnown RBP5.96□□□□□ -1.45
PTPRD-205ENST00000397611 TRIM6Q9C030 488 aaPredicted RBP5.96□□□□□ -1.45
PTPRD-205ENST00000397611 SH2D4AQ9H788 454 aa5.96□□□□□ -1.45
PTPRD-205ENST00000397611 AIPL1Q9NZN9 384 aa5.96□□□□□ -1.45
PTPRD-205ENST00000397611 CEP72Q9P209 647 aa5.96□□□□□ -1.45
PTPRD-205ENST00000397611 CTDP1Q9Y5B0 961 aaPredicted RBP5.96□□□□□ -1.45
PTPRD-205ENST00000397611 MTMR3Q13615 1198 aa5.96□□□□□ -1.45
PTPRD-205ENST00000397611 FAM133BQ5BKY9 247 aaKnown RBP5.96□□□□□ -1.45
PTPRD-205ENST00000397611 HOOK3Q86VS8 718 aa5.96□□□□□ -1.45
PTPRD-205ENST00000397611 CREG2Q8IUH2 290 aa5.96□□□□□ -1.45
PTPRD-205ENST00000397611 CCDC63Q8NA47 563 aa5.96□□□□□ -1.45
PTPRD-205ENST00000397611 HELBQ8NG08 1087 aaPredicted RBP5.96□□□□□ -1.45
PTPRD-205ENST00000397611 MRRFQ96E11 262 aaKnown RBP5.96□□□□□ -1.45
PTPRD-205ENST00000397611 GDAQ9Y2T3 454 aa5.96□□□□□ -1.45
PTPRD-205ENST00000397611 GAKO14976 1311 aa5.96□□□□□ -1.45
PTPRD-205ENST00000397611 PLEKHA8P1O95397 391 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 GUCY2CP25092 1073 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 PLCB4Q15147 1175 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 LRIG3Q6UXM1 1119 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 GSPT2Q8IYD1 628 aaKnown RBP5.96□□□□□ -1.46
PTPRD-205ENST00000397611 TEX11Q8IYF3 940 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 LARP4BQ92615 738 aaKnown RBP5.96□□□□□ -1.46
PTPRD-205ENST00000397611 STAMQ92783 540 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 MRIQ9BWK5 157 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 SLITRK6Q9H5Y7 841 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 GEMIN8Q9NWZ8 242 aaKnown RBP5.96□□□□□ -1.46
PTPRD-205ENST00000397611 FAM170AA1A519 330 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 CETN2P41208 172 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 POLE2P56282 527 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 PDCLQ13371 301 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 SLC4A8Q2Y0W8 1093 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 ZNF444Q8N0Y2 327 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-205ENST00000397611 TACC3Q9Y6A5 838 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 HMGB1P1B2RPK0 211 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-205ENST00000397611 HIP1RO75146 1068 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 DRG2P55039 364 aaKnown RBP5.96□□□□□ -1.46
PTPRD-205ENST00000397611 AP3B2Q13367 1082 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 TYW1BQ6NUM6 668 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 DDX27Q96GQ7 796 aaKnown RBP5.96□□□□□ -1.46
PTPRD-205ENST00000397611 CNOT6LQ96LI5 555 aaKnown RBP5.96□□□□□ -1.46
PTPRD-205ENST00000397611 SEC63Q9UGP8 760 aaKnown RBP5.96□□□□□ -1.46
PTPRD-205ENST00000397611 HPCAL4Q9UM19 191 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 DIS3Q9Y2L1 958 aaKnown RBP5.96□□□□□ -1.46
PTPRD-205ENST00000397611 ERCC3P19447 782 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 RPL13P26373 211 aaKnown RBP5.96□□□□□ -1.46
PTPRD-205ENST00000397611 GJC1P36383 396 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 PDE4DQ08499 809 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 STK4Q13043 487 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 ZNF365Q70YC5 407 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 CABP7Q86V35 215 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 CCDC26Q8TAB7 109 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 PPP1R14CQ8TAE6 165 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 MTMR9Q96QG7 549 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 MMS19Q96T76 1030 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 TLR10Q9BXR5 811 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 HOMER2Q9NSB8 354 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 KLRF2D3W0D1 207 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 GGCXP38435 758 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 IRAK1P51617 712 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 EIF3BP55884 814 aaKnown RBP5.96□□□□□ -1.46
PTPRD-205ENST00000397611 RAPGEF1Q13905 1077 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 ZKSCAN8Q15776 578 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-205ENST00000397611 DDX60Q8IY21 1712 aaKnown RBP5.96□□□□□ -1.46
PTPRD-205ENST00000397611 SEC14L1Q92503 715 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 MCUR1Q96AQ8 359 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 SHISA4Q96DD7 197 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.96□□□□□ -1.46
PTPRD-205ENST00000397611 RREB1Q92766 1687 aa5.96□□□□□ -1.46
PTPRD-205ENST00000397611 A0A0A6YYK5 440 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-205ENST00000397611 FAM205CA6NFA0 338 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 CETN3O15182 167 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 BUB1O43683 1085 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 PFDN1O60925 122 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 SLC18A3Q16572 532 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 BMT2Q1RMZ1 405 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 MCM9Q9NXL9 1143 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 BTG4Q9NY30 223 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 TRAF3IP3Q9Y228 551 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 ATP6V0A2Q9Y487 856 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 ALDH3A1P30838 453 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 RANBP1P43487 201 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 KIF11P52732 1056 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 TAF11Q15544 211 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 NFIL3Q16649 462 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms