RNA–Protein interactions for RNA: ENST00000397113.6

FGFR1-209, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene FGFR1, Length 3,680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-209ENST00000397113 PDE8AO60658 829 aa11.23□□□□□ -0.61
FGFR1-209ENST00000397113 SHOX2O60902 331 aaPredicted RBP11.23□□□□□ -0.61
FGFR1-209ENST00000397113 USP17L8P0C7I0 530 aa11.23□□□□□ -0.61
FGFR1-209ENST00000397113 TSPY3P0CV98 308 aa11.23□□□□□ -0.61
FGFR1-209ENST00000397113 TSPY8P0CW00 308 aa11.23□□□□□ -0.61
FGFR1-209ENST00000397113 CALML3P27482 149 aa11.23□□□□□ -0.61
FGFR1-209ENST00000397113 AMPD3Q01432 767 aa11.23□□□□□ -0.61
FGFR1-209ENST00000397113 CHADLQ6NUI6 762 aa11.23□□□□□ -0.61
FGFR1-209ENST00000397113 MMGT1Q8N4V1 131 aa11.23□□□□□ -0.61
FGFR1-209ENST00000397113 ANKRD42Q8N9B4 389 aa11.23□□□□□ -0.61
FGFR1-209ENST00000397113 PNMA1Q8ND90 353 aa11.23□□□□□ -0.61
FGFR1-209ENST00000397113 SH3GL2Q99962 352 aa11.23□□□□□ -0.61
FGFR1-209ENST00000397113 ISCA1Q9BUE6 129 aa11.23□□□□□ -0.61
FGFR1-209ENST00000397113 RBM28Q9NW13 759 aaKnown RBP11.23□□□□□ -0.61
FGFR1-209ENST00000397113 MYH13Q9UKX3 1938 aa11.23□□□□□ -0.61
FGFR1-209ENST00000397113 CPP00450 1065 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 TROAPQ12815 778 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 SMIM5Q71RC9 77 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 KIF2BQ8N4N8 673 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 RSRC1Q96IZ7 334 aaKnown RBP11.22□□□□□ -0.61
FGFR1-209ENST00000397113 SEC16BQ96JE7 1060 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 PYM1Q9BRP8 204 aaKnown RBP11.22□□□□□ -0.61
FGFR1-209ENST00000397113 DDX20Q9UHI6 824 aaKnown RBP11.22□□□□□ -0.61
FGFR1-209ENST00000397113 A0A1W2PQC6 194 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 CLGNO14967 610 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 ACTN1P12814 892 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 HSD17B3P37058 310 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 CAVIN4Q5BKX8 364 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 SWT1Q5T5J6 900 aaKnown RBP11.22□□□□□ -0.61
FGFR1-209ENST00000397113 CNNM4Q6P4Q7 775 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 ZNF444Q8N0Y2 327 aaPredicted RBP11.22□□□□□ -0.61
FGFR1-209ENST00000397113 ZNF507Q8TCN5 953 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 KCNK9Q9NPC2 374 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 PNMA2Q9UL42 364 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 TPX2Q9ULW0 747 aaKnown RBP11.22□□□□□ -0.61
FGFR1-209ENST00000397113 ECM29Q5VYK3 1845 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 DNM1LO00429 736 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 FAM107AO95990 144 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 PLTPP55058 493 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 ZNF211Q13398 564 aaPredicted RBP11.22□□□□□ -0.61
FGFR1-209ENST00000397113 NAALADL2Q58DX5 795 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 KLHDC7AQ5VTJ3 777 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 PEX26Q7Z412 305 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 SNX29Q8TEQ0 813 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 SPDL1Q96EA4 605 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 TRIM51Q9BSJ1 452 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 TRIM9Q9C026 710 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 DONSONQ9NYP3 566 aa11.22□□□□□ -0.61
FGFR1-209ENST00000397113 ARPP21Q9UBL0 812 aaPredicted RBP11.22□□□□□ -0.61
FGFR1-209ENST00000397113 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.22□□□□□ -0.61
FGFR1-209ENST00000397113 FLT3P36888 993 aa11.21□□□□□ -0.61
FGFR1-209ENST00000397113 ACCSLQ4AC99 568 aa11.21□□□□□ -0.61
FGFR1-209ENST00000397113 GIGYF2Q6Y7W6 1299 aaKnown RBP11.21□□□□□ -0.61
FGFR1-209ENST00000397113 CCDC84Q86UT8 332 aaPredicted RBP11.21□□□□□ -0.61
FGFR1-209ENST00000397113 DZIP1Q86YF9 867 aaKnown RBP11.21□□□□□ -0.61
FGFR1-209ENST00000397113 CCDC63Q8NA47 563 aa11.21□□□□□ -0.61
FGFR1-209ENST00000397113 RETREG2Q8NC44 543 aa11.21□□□□□ -0.61
FGFR1-209ENST00000397113 MRRFQ96E11 262 aaKnown RBP11.21□□□□□ -0.61
FGFR1-209ENST00000397113 ACSBG1Q96GR2 724 aa11.21□□□□□ -0.61
FGFR1-209ENST00000397113 NIP7Q9Y221 180 aaKnown RBP eCLIP11.21□□□□□ -0.61
FGFR1-209ENST00000397113 A0A087X0T9 212 aa11.21□□□□□ -0.61
FGFR1-209ENST00000397113 TTI1O43156 1089 aa11.21□□□□□ -0.61
FGFR1-209ENST00000397113 FAM228BP0C875 321 aa11.21□□□□□ -0.61
FGFR1-209ENST00000397113 CHRNDQ07001 517 aa11.21□□□□□ -0.61
FGFR1-209ENST00000397113 VCPKMTQ9H867 229 aa11.21□□□□□ -0.61
FGFR1-209ENST00000397113 CHORDC1Q9UHD1 332 aaPredicted RBP11.21□□□□□ -0.61
FGFR1-209ENST00000397113 CHD4Q14839 1912 aa11.21□□□□□ -0.62
FGFR1-209ENST00000397113 ERVV-2B6SEH9 535 aa11.21□□□□□ -0.62
FGFR1-209ENST00000397113 CALM1P0DP23 149 aa11.21□□□□□ -0.62
FGFR1-209ENST00000397113 CALM2P0DP24 149 aa11.21□□□□□ -0.62
FGFR1-209ENST00000397113 CALM3P0DP25 149 aa11.21□□□□□ -0.62
FGFR1-209ENST00000397113 ITGA4P13612 1032 aa11.21□□□□□ -0.62
FGFR1-209ENST00000397113 KCNQ4P56696 695 aa11.21□□□□□ -0.62
FGFR1-209ENST00000397113 HERC4Q5GLZ8 1057 aaPredicted RBP11.21□□□□□ -0.62
FGFR1-209ENST00000397113 ANKS4BQ8N8V4 417 aa11.21□□□□□ -0.62
FGFR1-209ENST00000397113 GIMAP8Q8ND71 665 aaPredicted RBP11.21□□□□□ -0.62
FGFR1-209ENST00000397113 STAMBPL1Q96FJ0 436 aa11.21□□□□□ -0.62
FGFR1-209ENST00000397113 DHTKD1Q96HY7 919 aaPredicted RBP11.21□□□□□ -0.62
FGFR1-209ENST00000397113 TRIM6Q9C030 488 aaPredicted RBP11.21□□□□□ -0.62
FGFR1-209ENST00000397113 TMEM260Q9NX78 707 aa11.21□□□□□ -0.62
FGFR1-209ENST00000397113 SEC63Q9UGP8 760 aaKnown RBP11.21□□□□□ -0.62
FGFR1-209ENST00000397113 PLAGL2Q9UPG8 496 aa11.21□□□□□ -0.62
FGFR1-209ENST00000397113 SMCO2A6NFE2 343 aa11.2□□□□□ -0.62
FGFR1-209ENST00000397113 RASSF10A6NK89 507 aa11.2□□□□□ -0.62
FGFR1-209ENST00000397113 SART1O43290 800 aaKnown RBP11.2□□□□□ -0.62
FGFR1-209ENST00000397113 FAM83BQ5T0W9 1011 aa11.2□□□□□ -0.62
FGFR1-209ENST00000397113 USP17L2Q6R6M4 530 aa11.2□□□□□ -0.62
FGFR1-209ENST00000397113 YIPF3Q9GZM5 350 aa11.2□□□□□ -0.62
FGFR1-209ENST00000397113 SEMA6BQ9H3T3 888 aa11.2□□□□□ -0.62
FGFR1-209ENST00000397113 SAMD15Q9P1V8 674 aa11.2□□□□□ -0.62
FGFR1-209ENST00000397113 PTPN22Q9Y2R2 807 aa11.2□□□□□ -0.62
FGFR1-209ENST00000397113 SPATA31A6Q5VVP1 1343 aa11.2□□□□□ -0.62
FGFR1-209ENST00000397113 HMGB1P1B2RPK0 211 aaPredicted RBP11.2□□□□□ -0.62
FGFR1-209ENST00000397113 OR52Z1P0C646 297 aa11.2□□□□□ -0.62
FGFR1-209ENST00000397113 BIRC2Q13490 618 aa11.2□□□□□ -0.62
FGFR1-209ENST00000397113 SEC23AQ15436 765 aa11.2□□□□□ -0.62
FGFR1-209ENST00000397113 ASIC2Q16515 512 aa11.2□□□□□ -0.62
FGFR1-209ENST00000397113 RUFY4Q6ZNE9 571 aa11.2□□□□□ -0.62
FGFR1-209ENST00000397113 ELOA2Q8IYF1 753 aaPredicted RBP11.2□□□□□ -0.62
FGFR1-209ENST00000397113 FUKQ8N0W3 1084 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms