RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 SPOPLQ6IQ16 392 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 FAM186BQ8IYM0 893 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 AFF4Q9UHB7 1163 aaKnown RBP18.88■□□□□ 0.61
MCF2L-208ENST00000397030 SOS2Q07890 1332 aaPredicted RBP18.88■□□□□ 0.61
MCF2L-208ENST00000397030 FAM196BA6NMK8 535 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 CPB1P15086 417 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 ZKSCAN5Q9Y2L8 839 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 TTC4O95801 387 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 CRKP46108 304 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 GRAPQ13588 217 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 RCN2Q14257 317 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 MXD4Q14582 209 aaPredicted RBP18.88■□□□□ 0.61
MCF2L-208ENST00000397030 GRAPLQ8TC17 118 aaPredicted RBP18.88■□□□□ 0.61
MCF2L-208ENST00000397030 SNX19Q92543 992 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 WDR11Q9BZH6 1224 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 SARS2Q9NP81 518 aaKnown RBP18.88■□□□□ 0.61
MCF2L-208ENST00000397030 SFI1A8K8P3 1242 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 IL6STP40189 918 aaPredicted RBP18.88■□□□□ 0.61
MCF2L-208ENST00000397030 DEPDC1BQ8WUY9 529 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 LARP4BQ92615 738 aaKnown RBP18.88■□□□□ 0.61
MCF2L-208ENST00000397030 TACO1Q9BSH4 297 aaKnown RBP18.88■□□□□ 0.61
MCF2L-208ENST00000397030 DHX36Q9H2U1 1008 aaKnown RBP18.88■□□□□ 0.61
MCF2L-208ENST00000397030 BPIFB4P59827 614 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 B4GALNT4Q76KP1 1039 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 IL17REQ8NFR9 667 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 IFT43Q96FT9 208 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 RNF40O75150 1001 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 EEF1GP26641 437 aaKnown RBP18.87■□□□□ 0.61
MCF2L-208ENST00000397030 HADHAP40939 763 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 C8orf34Q49A92 452 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 LCORLQ8N3X6 602 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 CNOT6LQ96LI5 555 aaKnown RBP18.87■□□□□ 0.61
MCF2L-208ENST00000397030 BCAP29Q9UHQ4 241 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 CLIC4Q9Y696 253 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 PROSER3Q2NL68 480 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 ZNF394Q53GI3 561 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 TSPOAP1O95153 1857 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 TRIP13Q15645 432 aaPredicted RBP18.87■□□□□ 0.61
MCF2L-208ENST00000397030 NUDCD1Q96RS6 583 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 ELP3Q9H9T3 547 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 PHEXP78562 749 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 MECOMQ03112 1051 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 CROCCP2Q86T23 111 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 SH3KBP1Q96B97 665 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 DYRK4Q9NR20 520 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 KBTBD13C9JR72 458 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 ZNF853P0CG23 659 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 NFKBIAP25963 317 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 ANKRD13CQ8N6S4 541 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 TYW1Q9NV66 732 aaKnown RBP18.87■□□□□ 0.61
MCF2L-208ENST00000397030 CLCA2Q9UQC9 943 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 ARAP3Q8WWN8 1544 aa18.87■□□□□ 0.61
MCF2L-208ENST00000397030 EVI5O60447 810 aa18.86■□□□□ 0.61
MCF2L-208ENST00000397030 SRPK1Q96SB4 655 aaKnown RBP18.86■□□□□ 0.61
MCF2L-208ENST00000397030 VCX3AQ9NNX9 186 aa18.86■□□□□ 0.61
MCF2L-208ENST00000397030 NUP160Q12769 1436 aa18.86■□□□□ 0.61
MCF2L-208ENST00000397030 ABCB11O95342 1321 aa18.86■□□□□ 0.61
MCF2L-208ENST00000397030 TNPO2O14787 897 aaKnown RBP18.86■□□□□ 0.61
MCF2L-208ENST00000397030 RHPN2Q8IUC4 686 aa18.86■□□□□ 0.61
MCF2L-208ENST00000397030 SPECC1L-ADORA2AF8WAN1 911 aa18.86■□□□□ 0.61
MCF2L-208ENST00000397030 TSNAXIP1Q2TAA8 658 aa18.86■□□□□ 0.61
MCF2L-208ENST00000397030 TTC19Q6DKK2 380 aaPredicted RBP18.86■□□□□ 0.61
MCF2L-208ENST00000397030 IFT122Q9HBG6 1241 aa18.86■□□□□ 0.61
MCF2L-208ENST00000397030 GPBP1L1Q9HC44 474 aaPredicted RBP18.86■□□□□ 0.61
MCF2L-208ENST00000397030 PPP2R5EQ16537 467 aa18.86■□□□□ 0.61
MCF2L-208ENST00000397030 RNF10Q8N5U6 811 aaKnown RBP18.86■□□□□ 0.61
MCF2L-208ENST00000397030 DOLKQ9UPQ8 538 aa18.86■□□□□ 0.61
MCF2L-208ENST00000397030 FAM95CA0A1B0GW59 222 aa18.86■□□□□ 0.61
MCF2L-208ENST00000397030 ATP10DQ9P241 1426 aa18.86■□□□□ 0.61
MCF2L-208ENST00000397030 F8W8V4 182 aa18.85■□□□□ 0.61
MCF2L-208ENST00000397030 STXBP2Q15833 593 aa18.85■□□□□ 0.61
MCF2L-208ENST00000397030 TLK1Q9UKI8 766 aa18.85■□□□□ 0.61
MCF2L-208ENST00000397030 GAP43P17677 238 aa18.85■□□□□ 0.61
MCF2L-208ENST00000397030 PEX3P56589 373 aa18.85■□□□□ 0.61
MCF2L-208ENST00000397030 CABS1Q96KC9 395 aa18.85■□□□□ 0.61
MCF2L-208ENST00000397030 AFPP02771 609 aaKnown RBP18.85■□□□□ 0.61
MCF2L-208ENST00000397030 TRIM67Q6ZTA4 783 aa18.85■□□□□ 0.61
MCF2L-208ENST00000397030 FAM160B2Q86V87 743 aa18.85■□□□□ 0.61
MCF2L-208ENST00000397030 COG4Q9H9E3 785 aa18.85■□□□□ 0.61
MCF2L-208ENST00000397030 GFPT2O94808 682 aa18.85■□□□□ 0.61
MCF2L-208ENST00000397030 PALLDQ8WX93 1383 aa18.85■□□□□ 0.61
MCF2L-208ENST00000397030 EAF2Q96CJ1 260 aaPredicted RBP18.85■□□□□ 0.61
MCF2L-208ENST00000397030 XPO4Q9C0E2 1151 aaKnown RBP18.85■□□□□ 0.61
MCF2L-208ENST00000397030 FARP1Q9Y4F1 1045 aaPredicted RBP18.85■□□□□ 0.61
MCF2L-208ENST00000397030 SAR1BQ9Y6B6 198 aa18.85■□□□□ 0.61
MCF2L-208ENST00000397030 ADCY9O60503 1353 aa18.85■□□□□ 0.61
MCF2L-208ENST00000397030 TMEM2Q9UHN6 1383 aa18.85■□□□□ 0.61
MCF2L-208ENST00000397030 K7ERI5 159 aa18.84■□□□□ 0.61
MCF2L-208ENST00000397030 GTPBP6O43824 516 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-208ENST00000397030 CYP27A1Q02318 531 aa18.84■□□□□ 0.61
MCF2L-208ENST00000397030 ELF2Q15723 593 aa18.84■□□□□ 0.61
MCF2L-208ENST00000397030 LONP1P36776 959 aaKnown RBP18.84■□□□□ 0.61
MCF2L-208ENST00000397030 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.84■□□□□ 0.61
MCF2L-208ENST00000397030 SH3RF3Q8TEJ3 882 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-208ENST00000397030 KRT82Q9NSB4 513 aa18.84■□□□□ 0.61
MCF2L-208ENST00000397030 TLR7Q9NYK1 1049 aaKnown RBP18.84■□□□□ 0.61
MCF2L-208ENST00000397030 NPHP4O75161 1426 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-208ENST00000397030 MOCS2O96007 188 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-208ENST00000397030 KIAA1755Q5JYT7 1200 aa18.84■□□□□ 0.61
MCF2L-208ENST00000397030 PBXIP1Q96AQ6 731 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms