RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 H3BRB1 525 aa21.68■■□□□ 1.06
MCF2L-207ENST00000397024 LGALS2P05162 132 aa21.68■■□□□ 1.06
MCF2L-207ENST00000397024 FUT2Q10981 343 aa21.68■■□□□ 1.06
MCF2L-207ENST00000397024 NEDD9Q14511 834 aa21.68■■□□□ 1.06
MCF2L-207ENST00000397024 MBTPS1Q14703 1052 aa21.68■■□□□ 1.06
MCF2L-207ENST00000397024 ZNF618Q5T7W0 954 aa21.68■■□□□ 1.06
MCF2L-207ENST00000397024 METTL7BQ6UX53 244 aa21.68■■□□□ 1.06
MCF2L-207ENST00000397024 GAS2L1Q99501 681 aaPredicted RBP21.68■■□□□ 1.06
MCF2L-207ENST00000397024 GPR20Q99678 358 aa21.68■■□□□ 1.06
MCF2L-207ENST00000397024 TUT1Q9H6E5 874 aaKnown RBP21.68■■□□□ 1.06
MCF2L-207ENST00000397024 ATP9AO75110 1047 aa21.67■■□□□ 1.06
MCF2L-207ENST00000397024 ARHGEF15O94989 841 aa21.67■■□□□ 1.06
MCF2L-207ENST00000397024 CXCL10P02778 98 aa21.67■■□□□ 1.06
MCF2L-207ENST00000397024 PPP2R2DQ66LE6 453 aa21.67■■□□□ 1.06
MCF2L-207ENST00000397024 XRRA1Q6P2D8 792 aa21.67■■□□□ 1.06
MCF2L-207ENST00000397024 PRDM6Q9NQX0 595 aa21.67■■□□□ 1.06
MCF2L-207ENST00000397024 NOP56O00567 594 aaKnown RBP21.66■■□□□ 1.06
MCF2L-207ENST00000397024 CA3P07451 260 aa21.66■■□□□ 1.06
MCF2L-207ENST00000397024 ITGB5P18084 799 aa21.66■■□□□ 1.06
MCF2L-207ENST00000397024 HOXC8P31273 242 aa21.66■■□□□ 1.06
MCF2L-207ENST00000397024 WWC2Q6AWC2 1192 aa21.66■■□□□ 1.06
MCF2L-207ENST00000397024 TYW1BQ6NUM6 668 aa21.66■■□□□ 1.06
MCF2L-207ENST00000397024 SYNE3Q6ZMZ3 975 aa21.66■■□□□ 1.06
MCF2L-207ENST00000397024 HEATR3Q7Z4Q2 680 aa21.66■■□□□ 1.06
MCF2L-207ENST00000397024 TMCO2Q7Z6W1 182 aaPredicted RBP21.66■■□□□ 1.06
MCF2L-207ENST00000397024 SERINC5Q86VE9 423 aa21.66■■□□□ 1.06
MCF2L-207ENST00000397024 TRIM50Q86XT4 487 aa21.66■■□□□ 1.06
MCF2L-207ENST00000397024 HERC6Q8IVU3 1022 aa21.66■■□□□ 1.06
MCF2L-207ENST00000397024 PHOSPHO2Q8TCD6 241 aa21.66■■□□□ 1.06
MCF2L-207ENST00000397024 PPM1EQ8WY54 764 aa21.66■■□□□ 1.06
MCF2L-207ENST00000397024 SLC9A7Q96T83 725 aa21.66■■□□□ 1.06
MCF2L-207ENST00000397024 SENP7Q9BQF6 1050 aa21.66■■□□□ 1.06
MCF2L-207ENST00000397024 RNPEPQ9H4A4 650 aa21.66■■□□□ 1.06
MCF2L-207ENST00000397024 FAM217BQ9NTX9 383 aaPredicted RBP21.66■■□□□ 1.06
MCF2L-207ENST00000397024 PTPRSQ13332 1948 aa21.65■■□□□ 1.06
MCF2L-207ENST00000397024 CNTNAP5Q8WYK1 1306 aa21.65■■□□□ 1.06
MCF2L-207ENST00000397024 SMIM10L2AP0DMW4 78 aa21.65■■□□□ 1.06
MCF2L-207ENST00000397024 SMIM10L2BP0DMW5 78 aa21.65■■□□□ 1.06
MCF2L-207ENST00000397024 CPA1P15085 419 aa21.65■■□□□ 1.06
MCF2L-207ENST00000397024 SP4Q02446 784 aa21.65■■□□□ 1.06
MCF2L-207ENST00000397024 USP26Q9BXU7 913 aa21.65■■□□□ 1.06
MCF2L-207ENST00000397024 PCDHA6Q9UN73 950 aa21.65■■□□□ 1.06
MCF2L-207ENST00000397024 PCDHA8Q9Y5H6 950 aa21.65■■□□□ 1.06
MCF2L-207ENST00000397024 C17orf102A2RUQ5 167 aa21.64■■□□□ 1.05
MCF2L-207ENST00000397024 RFXAPO00287 272 aa21.64■■□□□ 1.05
MCF2L-207ENST00000397024 TREHO43280 583 aa21.64■■□□□ 1.05
MCF2L-207ENST00000397024 ZBTB43O43298 467 aa21.64■■□□□ 1.05
MCF2L-207ENST00000397024 BAIAP3O94812 1187 aa21.64■■□□□ 1.05
MCF2L-207ENST00000397024 IGFBP4P22692 258 aa21.64■■□□□ 1.05
MCF2L-207ENST00000397024 WDR5P61964 334 aaKnown RBP21.64■■□□□ 1.05
MCF2L-207ENST00000397024 CCDC85BQ15834 202 aaPredicted RBP21.64■■□□□ 1.05
MCF2L-207ENST00000397024 RTN1Q16799 776 aa21.64■■□□□ 1.05
MCF2L-207ENST00000397024 UTP14CQ5TAP6 766 aaKnown RBP21.64■■□□□ 1.05
MCF2L-207ENST00000397024 NLRX1Q86UT6 975 aa21.64■■□□□ 1.05
MCF2L-207ENST00000397024 KCNB2Q92953 911 aa21.64■■□□□ 1.05
MCF2L-207ENST00000397024 ATP6V0A1Q93050 837 aa21.64■■□□□ 1.05
MCF2L-207ENST00000397024 OSBPL7Q9BZF2 842 aa21.64■■□□□ 1.05
MCF2L-207ENST00000397024 CERS4Q9HA82 394 aa21.64■■□□□ 1.05
MCF2L-207ENST00000397024 SETD4Q9NVD3 440 aa21.64■■□□□ 1.05
MCF2L-207ENST00000397024 UBIAD1Q9Y5Z9 338 aa21.64■■□□□ 1.05
MCF2L-207ENST00000397024 V9GY48 417 aaPredicted RBP21.64■■□□□ 1.05
MCF2L-207ENST00000397024 TTC28Q96AY4 2481 aa21.63■■□□□ 1.05
MCF2L-207ENST00000397024 KLF18A0A0U1RQI7 1052 aa21.63■■□□□ 1.05
MCF2L-207ENST00000397024 PARNO95453 639 aaKnown RBP21.63■■□□□ 1.05
MCF2L-207ENST00000397024 KCNA2P16389 499 aa21.63■■□□□ 1.05
MCF2L-207ENST00000397024 CDC27P30260 824 aa21.63■■□□□ 1.05
MCF2L-207ENST00000397024 DEFB103AP81534 67 aa21.63■■□□□ 1.05
MCF2L-207ENST00000397024 CNKSR3Q6P9H4 555 aa21.63■■□□□ 1.05
MCF2L-207ENST00000397024 GPRASP2Q96D09 838 aa21.63■■□□□ 1.05
MCF2L-207ENST00000397024 CCDC136Q96JN2 1154 aa21.63■■□□□ 1.05
MCF2L-207ENST00000397024 RBM28Q9NW13 759 aaKnown RBP21.63■■□□□ 1.05
MCF2L-207ENST00000397024 THPOP40225 353 aa21.62■■□□□ 1.05
MCF2L-207ENST00000397024 TAP1Q03518 808 aa21.62■■□□□ 1.05
MCF2L-207ENST00000397024 KRT32Q14532 448 aa21.62■■□□□ 1.05
MCF2L-207ENST00000397024 SPRED2Q7Z698 418 aa21.62■■□□□ 1.05
MCF2L-207ENST00000397024 PKD2L1Q9P0L9 805 aa21.62■■□□□ 1.05
MCF2L-207ENST00000397024 GSTTP1A0A1W2PQM5 241 aa21.61■■□□□ 1.05
MCF2L-207ENST00000397024 EPOPA6NHQ4 379 aa21.61■■□□□ 1.05
MCF2L-207ENST00000397024 SPDYE3A6NKU9 549 aa21.61■■□□□ 1.05
MCF2L-207ENST00000397024 GOLGA8AA7E2F4 631 aa21.61■■□□□ 1.05
MCF2L-207ENST00000397024 GOLGA8BA8MQT2 603 aa21.61■■□□□ 1.05
MCF2L-207ENST00000397024 RSPH10B2B2RC85 870 aa21.61■■□□□ 1.05
MCF2L-207ENST00000397024 RSPH10BP0C881 870 aa21.61■■□□□ 1.05
MCF2L-207ENST00000397024 KCNJ6P48051 423 aa21.61■■□□□ 1.05
MCF2L-207ENST00000397024 ADAM17P78536 824 aa21.61■■□□□ 1.05
MCF2L-207ENST00000397024 CYP2W1Q8TAV3 490 aa21.61■■□□□ 1.05
MCF2L-207ENST00000397024 JADE2Q9NQC1 790 aa21.61■■□□□ 1.05
MCF2L-207ENST00000397024 SNX14Q9Y5W7 946 aa21.61■■□□□ 1.05
MCF2L-207ENST00000397024 ABHD14A-ACY1A0A1B0GW23 586 aa21.6■■□□□ 1.05
MCF2L-207ENST00000397024 LCHNA4D1U4 455 aa21.6■■□□□ 1.05
MCF2L-207ENST00000397024 STXBP3O00186 592 aa21.6■■□□□ 1.05
MCF2L-207ENST00000397024 ADD1P35611 737 aaKnown RBP21.6■■□□□ 1.05
MCF2L-207ENST00000397024 NAPAP54920 295 aa21.6■■□□□ 1.05
MCF2L-207ENST00000397024 APOBRQ0VD83 1088 aa21.6■■□□□ 1.05
MCF2L-207ENST00000397024 GIMAP8Q8ND71 665 aaPredicted RBP21.6■■□□□ 1.05
MCF2L-207ENST00000397024 PGBD1Q96JS3 809 aa21.6■■□□□ 1.05
MCF2L-207ENST00000397024 RIC8AQ9NPQ8 531 aa21.6■■□□□ 1.05
MCF2L-207ENST00000397024 XIRP2A4UGR9 3374 aa21.59■■□□□ 1.05
MCF2L-207ENST00000397024 PRRC2BQ5JSZ5 2229 aaKnown RBP21.59■■□□□ 1.05
MCF2L-207ENST00000397024 KIF28PB7ZC32 967 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms