RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 ARHGAP1Q07960 439 aa9.43□□□□□ -0.9
NUP98-206ENST00000397013 MBTPS1Q14703 1052 aa9.43□□□□□ -0.9
NUP98-206ENST00000397013 PPP2R5BQ15173 497 aa9.43□□□□□ -0.9
NUP98-206ENST00000397013 TMEM31Q5JXX7 168 aa9.43□□□□□ -0.9
NUP98-206ENST00000397013 TRAF7Q6Q0C0 670 aa9.43□□□□□ -0.9
NUP98-206ENST00000397013 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.43□□□□□ -0.9
NUP98-206ENST00000397013 SEPT14Q6ZU15 432 aa9.43□□□□□ -0.9
NUP98-206ENST00000397013 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.43□□□□□ -0.9
NUP98-206ENST00000397013 ZKSCAN3Q9BRR0 538 aa9.43□□□□□ -0.9
NUP98-206ENST00000397013 ALG1Q9BT22 464 aa9.43□□□□□ -0.9
NUP98-206ENST00000397013 HDAC6Q9UBN7 1215 aa9.43□□□□□ -0.9
NUP98-206ENST00000397013 ANAPC4Q9UJX5 808 aa9.43□□□□□ -0.9
NUP98-206ENST00000397013 COG5Q9UP83 839 aa9.43□□□□□ -0.9
NUP98-206ENST00000397013 NOD1Q9Y239 953 aa9.43□□□□□ -0.9
NUP98-206ENST00000397013 SCN5AQ14524 2016 aa9.43□□□□□ -0.9
NUP98-206ENST00000397013 GBF1Q92538 1859 aa9.42□□□□□ -0.9
NUP98-206ENST00000397013 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.42□□□□□ -0.9
NUP98-206ENST00000397013 A0A0D9SFI3 127 aa9.42□□□□□ -0.9
NUP98-206ENST00000397013 KIF28PB7ZC32 967 aa9.42□□□□□ -0.9
NUP98-206ENST00000397013 PI4K2BG5E9Z4 385 aa9.42□□□□□ -0.9
NUP98-206ENST00000397013 MMP3P08254 477 aa9.42□□□□□ -0.9
NUP98-206ENST00000397013 TOP1P11387 765 aaKnown RBP9.42□□□□□ -0.9
NUP98-206ENST00000397013 CKBP12277 381 aa9.42□□□□□ -0.9
NUP98-206ENST00000397013 IL9P15248 144 aa9.42□□□□□ -0.9
NUP98-206ENST00000397013 ZNF543Q08ER8 600 aa9.42□□□□□ -0.9
NUP98-206ENST00000397013 BFSP2Q13515 415 aa9.42□□□□□ -0.9
NUP98-206ENST00000397013 TRIM71Q2Q1W2 868 aaKnown RBP9.42□□□□□ -0.9
NUP98-206ENST00000397013 ZNF589Q86UQ0 364 aaPredicted RBP9.42□□□□□ -0.9
NUP98-206ENST00000397013 ALYREFQ86V81 257 aaKnown RBP9.42□□□□□ -0.9
NUP98-206ENST00000397013 SCFD2Q8WU76 684 aa9.42□□□□□ -0.9
NUP98-206ENST00000397013 C17orf80Q9BSJ5 609 aa9.42□□□□□ -0.9
NUP98-206ENST00000397013 BCAS3Q9H6U6 928 aa9.42□□□□□ -0.9
NUP98-206ENST00000397013 TTC41PQ6P2S7 1318 aa9.41□□□□□ -0.9
NUP98-206ENST00000397013 SALL3Q9BXA9 1300 aa9.41□□□□□ -0.9
NUP98-206ENST00000397013 LINC01553A4QN01 128 aa9.41□□□□□ -0.9
NUP98-206ENST00000397013 GPR37L1O60883 481 aa9.41□□□□□ -0.9
NUP98-206ENST00000397013 CXCL10P02778 98 aa9.41□□□□□ -0.9
NUP98-206ENST00000397013 SELPP16109 830 aa9.41□□□□□ -0.9
NUP98-206ENST00000397013 KCNA5P22460 613 aa9.41□□□□□ -0.9
NUP98-206ENST00000397013 KCNJ6P48051 423 aa9.41□□□□□ -0.9
NUP98-206ENST00000397013 PTPN11Q06124 597 aaPredicted RBP9.41□□□□□ -0.9
NUP98-206ENST00000397013 ALX1Q15699 326 aa9.41□□□□□ -0.9
NUP98-206ENST00000397013 ZNF618Q5T7W0 954 aa9.41□□□□□ -0.9
NUP98-206ENST00000397013 LRRC8DQ7L1W4 858 aa9.41□□□□□ -0.9
NUP98-206ENST00000397013 TBC1D10CQ8IV04 446 aa9.41□□□□□ -0.9
NUP98-206ENST00000397013 SYTL5Q8TDW5 730 aaPredicted RBP9.41□□□□□ -0.9
NUP98-206ENST00000397013 CHMP4BQ9H444 224 aaKnown RBP9.41□□□□□ -0.9
NUP98-206ENST00000397013 UBE2ZQ9H832 354 aaPredicted RBP9.41□□□□□ -0.9
NUP98-206ENST00000397013 LRRC37A2A6NM11 1700 aa9.41□□□□□ -0.9
NUP98-206ENST00000397013 LCTP09848 1927 aa9.41□□□□□ -0.9
NUP98-206ENST00000397013 MYH4Q9Y623 1939 aa9.41□□□□□ -0.9
NUP98-206ENST00000397013 TET1Q8NFU7 2136 aa9.4□□□□□ -0.9
NUP98-206ENST00000397013 H3BQ06 376 aaPredicted RBP9.4□□□□□ -0.9
NUP98-206ENST00000397013 NKRFO15226 690 aaKnown RBP eCLIP9.4□□□□□ -0.9
NUP98-206ENST00000397013 KPNA6O60684 536 aa9.4□□□□□ -0.9
NUP98-206ENST00000397013 BAIAP3O94812 1187 aa9.4□□□□□ -0.9
NUP98-206ENST00000397013 GJB5O95377 273 aa9.4□□□□□ -0.9
NUP98-206ENST00000397013 ZNF286BP0CG31 522 aa9.4□□□□□ -0.9
NUP98-206ENST00000397013 SNHG28P0DPA3 235 aa9.4□□□□□ -0.9
NUP98-206ENST00000397013 HSPD1P10809 573 aaKnown RBP9.4□□□□□ -0.9
NUP98-206ENST00000397013 MX1P20591 662 aa9.4□□□□□ -0.9
NUP98-206ENST00000397013 ERVK-21P61565 698 aa9.4□□□□□ -0.9
NUP98-206ENST00000397013 MSS51Q4VC12 460 aa9.4□□□□□ -0.9
NUP98-206ENST00000397013 BRDTQ58F21 947 aaPredicted RBP9.4□□□□□ -0.9
NUP98-206ENST00000397013 BLOC1S3Q6QNY0 202 aa9.4□□□□□ -0.9
NUP98-206ENST00000397013 AFAP1L1Q8TED9 768 aa9.4□□□□□ -0.9
NUP98-206ENST00000397013 GPKOWQ92917 476 aaPredicted RBP eCLIP9.4□□□□□ -0.93e-6■■□□□ 12.4
NUP98-206ENST00000397013 RAD9AQ99638 391 aa9.4□□□□□ -0.9
NUP98-206ENST00000397013 VAT1LQ9HCJ6 419 aa9.4□□□□□ -0.9
NUP98-206ENST00000397013 TCP11L1Q9NUJ3 509 aa9.4□□□□□ -0.9
NUP98-206ENST00000397013 DDX41Q9UJV9 622 aaKnown RBP9.4□□□□□ -0.9
NUP98-206ENST00000397013 TELO2Q9Y4R8 837 aa9.4□□□□□ -0.9
NUP98-206ENST00000397013 TRAK2O60296 914 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 LGR5O75473 907 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 RGS20O76081 388 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 GH1P01241 217 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 EIF2AK2P19525 551 aaKnown RBP9.39□□□□□ -0.91
NUP98-206ENST00000397013 SP2Q02086 613 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 NMIQ13287 307 aaPredicted RBP9.39□□□□□ -0.91
NUP98-206ENST00000397013 KIAA0753Q2KHM9 967 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 LRRFIP1Q32MZ4 808 aaKnown RBP9.39□□□□□ -0.91
NUP98-206ENST00000397013 ANKRD45Q5TZF3 282 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 DIEXFQ68CQ4 756 aaKnown RBP9.39□□□□□ -0.91
NUP98-206ENST00000397013 CNKSR3Q6P9H4 555 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 LYPD8Q6UX82 237 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 RNF19BQ6ZMZ0 732 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 SESTD1Q86VW0 696 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 FAM178BQ8IXR5 827 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 ADGRF4Q8IZF3 695 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 GJD3Q8N144 294 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 DBF4BQ8NFT6 615 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 DNERQ8NFT8 737 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 UIMC1Q96RL1 719 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 TGS1Q96RS0 853 aaKnown RBP9.39□□□□□ -0.91
NUP98-206ENST00000397013 GTF2IRD1Q9UHL9 959 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 HCN4Q9Y3Q4 1203 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 WDFY4Q6ZS81 3184 aa9.39□□□□□ -0.91
NUP98-206ENST00000397013 NEDD4P46934 1319 aa9.38□□□□□ -0.91
NUP98-206ENST00000397013 RAD50Q92878 1312 aa9.38□□□□□ -0.91
NUP98-206ENST00000397013 LOC102724159A0A0B4J2E5 919 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms