RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 C6orf50Q9HD87 102 aa12.7□□□□□ -0.38
NDUFA9-202ENST00000396655 JADE2Q9NQC1 790 aa12.7□□□□□ -0.38
NDUFA9-202ENST00000396655 SH3GLB2Q9NR46 395 aa12.7□□□□□ -0.38
NDUFA9-202ENST00000396655 RTEL1Q9NZ71 1219 aa12.7□□□□□ -0.38
NDUFA9-202ENST00000396655 UBIAD1Q9Y5Z9 338 aa12.7□□□□□ -0.38
NDUFA9-202ENST00000396655 PARNO95453 639 aaKnown RBP12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 PFKMP08237 780 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 ITGB5P18084 799 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 RFC2P35250 354 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 SREBF1P36956 1147 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 PSEN2P49810 448 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 SMAD3P84022 425 aaKnown RBP12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 RBL2Q08999 1139 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 SEMA3FQ13275 785 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 BFSP2Q13515 415 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 UBE2SQ16763 222 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 FAM47CQ5HY64 1035 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 RASIP1Q5U651 963 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 PSRC1Q6PGN9 363 aaPredicted RBP12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 NIPA1Q7RTP0 329 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 TRIM22Q8IYM9 498 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 PLCD3Q8N3E9 789 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 DEFB123Q8N688 67 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 C7orf31Q8N865 590 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 CAGE1Q8TC20 777 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 C16orf70Q9BSU1 422 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 IL23AQ9NPF7 189 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 PDRG1Q9NUG6 133 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 TRMT13Q9NUP7 481 aaKnown RBP12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 GTF2IRD1Q9UHL9 959 aa12.69□□□□□ -0.38
NDUFA9-202ENST00000396655 H3BRB1 525 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 MEIS1O00470 390 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 NOP56O00567 594 aaKnown RBP12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 CYP3A4P08684 503 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 CSF2RAP15509 400 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 KCNA2P16389 499 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 CYP2C18P33260 490 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 EPHB4P54760 987 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 MTMR1Q13613 665 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 MFSD10Q14728 455 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 PTGISQ16647 500 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 KIAA0753Q2KHM9 967 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 CEP55Q53EZ4 464 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 C9orf50Q5SZB4 431 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 C16orf59Q7L2K0 433 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 CYFIP1Q7L576 1253 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 CCDC155Q8N6L0 562 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 CCDC148Q8NFR7 591 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 CRYGNQ8WXF5 182 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 GPR20Q99678 358 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 MXRA8Q9BRK3 442 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 UPF3BQ9BZI7 483 aaKnown RBP12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 TUT1Q9H6E5 874 aaKnown RBP12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 NOD1Q9Y239 953 aa12.68□□□□□ -0.38
NDUFA9-202ENST00000396655 CPLX1O14810 134 aa12.67□□□□□ -0.38
NDUFA9-202ENST00000396655 HOXC8P31273 242 aa12.67□□□□□ -0.38
NDUFA9-202ENST00000396655 CCT2P78371 535 aaKnown RBP12.67□□□□□ -0.38
NDUFA9-202ENST00000396655 SSRP1Q08945 709 aaKnown RBP12.67□□□□□ -0.38
NDUFA9-202ENST00000396655 TMEM240Q5SV17 173 aa12.67□□□□□ -0.38
NDUFA9-202ENST00000396655 GALNT17Q6IS24 598 aa12.67□□□□□ -0.38
NDUFA9-202ENST00000396655 REXO1Q8N1G1 1221 aaKnown RBP12.67□□□□□ -0.38
NDUFA9-202ENST00000396655 RETREG2Q8NC44 543 aa12.67□□□□□ -0.38
NDUFA9-202ENST00000396655 AFAP1L1Q8TED9 768 aa12.67□□□□□ -0.38
NDUFA9-202ENST00000396655 PHKBQ93100 1093 aa12.67□□□□□ -0.38
NDUFA9-202ENST00000396655 ZFP91Q96JP5 570 aaPredicted RBP12.67□□□□□ -0.38
NDUFA9-202ENST00000396655 RNPC3Q96LT9 517 aaKnown RBP12.67□□□□□ -0.38
NDUFA9-202ENST00000396655 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.67□□□□□ -0.384e-6■■□□□ 12.7
NDUFA9-202ENST00000396655 ANO3Q9BYT9 981 aa12.67□□□□□ -0.38
NDUFA9-202ENST00000396655 PPP1R12CQ9BZL4 782 aa12.67□□□□□ -0.38
NDUFA9-202ENST00000396655 MTIF3Q9H2K0 278 aaKnown RBP12.67□□□□□ -0.38
NDUFA9-202ENST00000396655 KCNH7Q9NS40 1196 aa12.67□□□□□ -0.38
NDUFA9-202ENST00000396655 ZNF215Q9UL58 517 aaPredicted RBP12.67□□□□□ -0.38
NDUFA9-202ENST00000396655 STXBP5LQ9Y2K9 1186 aa12.67□□□□□ -0.38
NDUFA9-202ENST00000396655 CDH23Q9H251 3354 aa12.67□□□□□ -0.38
NDUFA9-202ENST00000396655 NFASCO94856 1347 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 TMEM265A0A087WTH1 108 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 ATP9AO75110 1047 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 CDKL5O76039 1030 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 DEXIO95424 95 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 FGBP02675 491 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 LGALS2P05162 132 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 GNAT1P11488 350 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 CYP2C9P11712 490 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 PTK7Q13308 1070 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 GDF6Q6KF10 455 aaPredicted RBP12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 ZNF365Q70YC5 407 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 SEPT1Q8WYJ6 367 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 HERVK_113Q902F9 699 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 CTAGE1Q96RT6 745 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 SLC26A6Q9BXS9 759 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 C22orf23Q9BZE7 217 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 WNT8AQ9H1J5 351 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 BCAS3Q9H6U6 928 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 NCOA5Q9HCD5 579 aaKnown RBP12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 HDAC6Q9UBN7 1215 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 MUC3AQ02505 3323 aa12.66□□□□□ -0.38
NDUFA9-202ENST00000396655 PFKFB2O60825 505 aa12.65□□□□□ -0.38
NDUFA9-202ENST00000396655 IQCF3P0C7M6 154 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms