RNA–Protein interactions for RNA: ENST00000396384.1

TUBB-207, Transcript of tubulin beta class I, humanhuman

TSL 3 BASIC

Gene TUBB, Length 2,823 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-207ENST00000396384 CDK8P49336 464 aa11.52□□□□□ -0.56
TUBB-207ENST00000396384 MRPS25P82663 173 aaKnown RBP11.52□□□□□ -0.56
TUBB-207ENST00000396384 SLC7A5Q01650 507 aa11.52□□□□□ -0.56
TUBB-207ENST00000396384 ITIH3Q06033 890 aa11.52□□□□□ -0.56
TUBB-207ENST00000396384 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.52□□□□□ -0.56
TUBB-207ENST00000396384 SND1Q7KZF4 910 aaKnown RBP eCLIP11.52□□□□□ -0.561e-28■■□□□ 11.6
TUBB-207ENST00000396384 ZNF572Q7Z3I7 529 aaPredicted RBP11.52□□□□□ -0.56
TUBB-207ENST00000396384 LARP4BQ92615 738 aaKnown RBP11.52□□□□□ -0.56
TUBB-207ENST00000396384 FAM163AQ96GL9 167 aaPredicted RBP11.52□□□□□ -0.56
TUBB-207ENST00000396384 GOLGA6AQ9NYA3 693 aa11.52□□□□□ -0.56
TUBB-207ENST00000396384 STK17AQ9UEE5 414 aa11.52□□□□□ -0.56
TUBB-207ENST00000396384 MAGEA1P43355 309 aa11.52□□□□□ -0.57
TUBB-207ENST00000396384 SLF2Q8IX21 1173 aa11.52□□□□□ -0.57
TUBB-207ENST00000396384 GUF1Q8N442 669 aaKnown RBP11.52□□□□□ -0.57
TUBB-207ENST00000396384 ANKRD13CQ8N6S4 541 aa11.52□□□□□ -0.57
TUBB-207ENST00000396384 MTMR9Q96QG7 549 aa11.52□□□□□ -0.57
TUBB-207ENST00000396384 UBA5Q9GZZ9 404 aa11.52□□□□□ -0.57
TUBB-207ENST00000396384 SUGT1Q9Y2Z0 365 aa11.52□□□□□ -0.57
TUBB-207ENST00000396384 HYOU1Q9Y4L1 999 aa11.52□□□□□ -0.57
TUBB-207ENST00000396384 NFKBIEO00221 500 aa11.51□□□□□ -0.57
TUBB-207ENST00000396384 ATP2B2Q01814 1243 aa11.51□□□□□ -0.57
TUBB-207ENST00000396384 LRRC63Q05C16 580 aa11.51□□□□□ -0.57
TUBB-207ENST00000396384 ORC2Q13416 577 aaPredicted RBP11.51□□□□□ -0.57
TUBB-207ENST00000396384 TMEM266Q2M3C6 531 aa11.51□□□□□ -0.57
TUBB-207ENST00000396384 GRIPAP1Q4V328 841 aa11.51□□□□□ -0.57
TUBB-207ENST00000396384 CACNA2D4Q7Z3S7 1137 aa11.51□□□□□ -0.57
TUBB-207ENST00000396384 TANGO6Q9C0B7 1094 aa11.51□□□□□ -0.57
TUBB-207ENST00000396384 SPON1Q9HCB6 807 aa11.51□□□□□ -0.57
TUBB-207ENST00000396384 SMARCAL1Q9NZC9 954 aa11.51□□□□□ -0.57
TUBB-207ENST00000396384 ZNF646O15015 1829 aaPredicted RBP11.51□□□□□ -0.57
TUBB-207ENST00000396384 NCK2O43639 380 aa11.51□□□□□ -0.57
TUBB-207ENST00000396384 PAFAH1B1P43034 410 aa11.51□□□□□ -0.57
TUBB-207ENST00000396384 CRKP46108 304 aa11.51□□□□□ -0.57
TUBB-207ENST00000396384 NAP1L1P55209 391 aaKnown RBP11.51□□□□□ -0.57
TUBB-207ENST00000396384 GFPT1Q06210 699 aaPredicted RBP11.51□□□□□ -0.57
TUBB-207ENST00000396384 PICALMQ13492 652 aa11.51□□□□□ -0.57
TUBB-207ENST00000396384 NEDD1Q8NHV4 660 aa11.51□□□□□ -0.57
TUBB-207ENST00000396384 RUBCNQ92622 972 aa11.51□□□□□ -0.57
TUBB-207ENST00000396384 PNMA5Q96PV4 448 aa11.51□□□□□ -0.57
TUBB-207ENST00000396384 TAOK3Q9H2K8 898 aa11.51□□□□□ -0.57
TUBB-207ENST00000396384 ZBTB12Q9Y330 459 aaPredicted RBP11.51□□□□□ -0.57
TUBB-207ENST00000396384 ABCB11O95342 1321 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 POTEMA6NI47 508 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 ANKRD65E5RJM6 399 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 FXR2P51116 673 aaKnown RBP eCLIP11.5□□□□□ -0.57
TUBB-207ENST00000396384 RBM5P52756 815 aaKnown RBP eCLIP11.5□□□□□ -0.57
TUBB-207ENST00000396384 RASSF7Q02833 373 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 LRRC41Q15345 812 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 APOBEC3HQ6NTF7 200 aaKnown RBP11.5□□□□□ -0.57
TUBB-207ENST00000396384 C16orf86Q6ZW13 317 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 BAP1Q92560 729 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 DDX12PQ92771 950 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 TEKT1Q969V4 418 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 CEP95Q96GE4 821 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 RAB34Q9BZG1 259 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 EHD2Q9NZN4 543 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 SALL4Q9UJQ4 1053 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 USP17L5A8MUK1 530 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 SLC37A4O43826 429 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 SMARCA1P28370 1054 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 CACNB3P54284 484 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 DNAJC21Q5F1R6 531 aaKnown RBP11.5□□□□□ -0.57
TUBB-207ENST00000396384 LRRC55Q6ZSA7 311 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 CCDC155Q8N6L0 562 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 RAD54LQ92698 747 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 NOX5Q96PH1 765 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 TSG101Q99816 390 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 USP40Q9NVE5 1235 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 STIM2Q9P246 746 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 PJA2O43164 708 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 BUB1O43683 1085 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 SHOX2O60902 331 aaPredicted RBP11.5□□□□□ -0.57
TUBB-207ENST00000396384 TDP2O95551 362 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 PLCG2P16885 1265 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 SLC1A4P43007 532 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 MAGEA9P43362 315 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 EPHB4P54760 987 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 PDIA5Q14554 519 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 TDRD12Q587J7 1177 aaKnown RBP11.5□□□□□ -0.57
TUBB-207ENST00000396384 KRT79Q5XKE5 535 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 NIM1KQ8IY84 436 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 GLIS3Q8NEA6 775 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 SNX29Q8TEQ0 813 aa11.5□□□□□ -0.57
TUBB-207ENST00000396384 FHDC1Q9C0D6 1143 aaPredicted RBP11.5□□□□□ -0.57
TUBB-207ENST00000396384 FRMPD2Q68DX3 1309 aaPredicted RBP11.49□□□□□ -0.57
TUBB-207ENST00000396384 ESYT2A0FGR8 921 aa11.49□□□□□ -0.57
TUBB-207ENST00000396384 CORO7P57737 925 aa11.49□□□□□ -0.57
TUBB-207ENST00000396384 HAUS3Q68CZ6 603 aa11.49□□□□□ -0.57
TUBB-207ENST00000396384 CDC42EP5Q6NZY7 148 aa11.49□□□□□ -0.57
TUBB-207ENST00000396384 C8orf74Q6P047 294 aa11.49□□□□□ -0.57
TUBB-207ENST00000396384 PDXDC1Q6P996 788 aa11.49□□□□□ -0.57
TUBB-207ENST00000396384 COA7Q96BR5 231 aa11.49□□□□□ -0.57
TUBB-207ENST00000396384 MTMR8Q96EF0 704 aa11.49□□□□□ -0.57
TUBB-207ENST00000396384 NUDT12Q9BQG2 462 aa11.49□□□□□ -0.57
TUBB-207ENST00000396384 TLR10Q9BXR5 811 aa11.49□□□□□ -0.57
TUBB-207ENST00000396384 LRRC27Q9C0I9 530 aa11.49□□□□□ -0.57
TUBB-207ENST00000396384 NLRC4Q9NPP4 1024 aa11.49□□□□□ -0.57
TUBB-207ENST00000396384 RIC8AQ9NPQ8 531 aa11.49□□□□□ -0.57
TUBB-207ENST00000396384 DDX4Q9NQI0 724 aaKnown RBP11.49□□□□□ -0.57
TUBB-207ENST00000396384 FER1L6Q2WGJ9 1857 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms