RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.19□□□□□ -0.94
NDE1-202ENST00000396355 MYCBPAPQ8TBZ2 947 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 FAM89AQ96GI7 184 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 NAF1Q96HR8 494 aaKnown RBP9.19□□□□□ -0.94
NDE1-202ENST00000396355 ISCA1Q9BUE6 129 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 PLCB1Q9NQ66 1216 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 HPS5Q9UPZ3 1129 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 A0A1W2PRG0 241 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 ZNF185O15231 689 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 ANTXR2P58335 489 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 RBL2Q08999 1139 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 PTGISQ16647 500 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 RUFY4Q6ZNE9 571 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 CCHCR1Q8TD31 782 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 MMS19Q96T76 1030 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 MYH3P11055 1940 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 ITGB4P16144 1822 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 CIAO1O76071 339 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 DDHD2O94830 711 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 SLCO1A2P46721 670 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 TUBB2AQ13885 445 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 NKX1-1Q15270 411 aaPredicted RBP9.19□□□□□ -0.94
NDE1-202ENST00000396355 RNF220Q5VTB9 566 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 ISLR2Q6UXK2 745 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 UTS2BQ765I0 119 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 CACNA2D4Q7Z3S7 1137 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 DTNBP1Q96EV8 351 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 XAGE2Q96GT9 111 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 SEC16BQ96JE7 1060 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 TUBB2BQ9BVA1 445 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 PREBQ9HCU5 417 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 TAB2Q9NYJ8 693 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 RABL2AQ9UBK7 228 aaPredicted RBP9.19□□□□□ -0.94
NDE1-202ENST00000396355 NIP7Q9Y221 180 aaKnown RBP eCLIP9.19□□□□□ -0.94
NDE1-202ENST00000396355 ITM2BQ9Y287 266 aa9.19□□□□□ -0.94
NDE1-202ENST00000396355 FGAP02671 866 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 ZAP70P43403 619 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 ZFYVE27Q5T4F4 411 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 CCDC174Q6PII3 467 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 C1orf228Q6PIY5 440 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 OR2W6PQ8NHA6 318 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 TTLL11Q8NHH1 800 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 NMD3Q96D46 503 aaKnown RBP9.18□□□□□ -0.94
NDE1-202ENST00000396355 NUDCD1Q96RS6 583 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 RPS6KC1Q96S38 1066 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 NARFQ9UHQ1 456 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 TFR2Q9UP52 801 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 DAAM1Q9Y4D1 1078 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 E2F6O75461 281 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 TMCC1O94876 653 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 FSBPO95073 299 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 VIL1P09327 827 aaKnown RBP9.18□□□□□ -0.94
NDE1-202ENST00000396355 ALDH3A1P30838 453 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 PCYT1AP49585 367 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 C6orf163Q5TEZ5 329 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 TRIM65Q6PJ69 517 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 STAG2Q8N3U4 1231 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 LARGE2Q8N3Y3 721 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 CCDC110Q8TBZ0 833 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 AGAP11Q8TF27 550 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 TATDN2Q93075 761 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 FBXO9Q9UK97 447 aaPredicted RBP9.18□□□□□ -0.94
NDE1-202ENST00000396355 BLOC1S6Q9UL45 172 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 BTKQ06187 659 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 DDR1Q08345 913 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 MB21D2Q8IYB1 491 aaPredicted RBP9.18□□□□□ -0.94
NDE1-202ENST00000396355 SCYL3Q8IZE3 742 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 KCNG4Q8TDN1 519 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 ZNF274Q96GC6 653 aaPredicted RBP9.18□□□□□ -0.94
NDE1-202ENST00000396355 DPH5Q9H2P9 285 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 ETNK1Q9HBU6 452 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 XAB2Q9HCS7 855 aaKnown RBP9.18□□□□□ -0.94
NDE1-202ENST00000396355 RTEL1Q9NZ71 1219 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 SMARCAL1Q9NZC9 954 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 PCDHA7Q9UN72 937 aa9.18□□□□□ -0.94
NDE1-202ENST00000396355 DPPA5A6NC42 116 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 KIF28PB7ZC32 967 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 HEXIM1O94992 359 aaKnown RBP9.17□□□□□ -0.94
NDE1-202ENST00000396355 USP14P54578 494 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 KRT83P78385 493 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 ZBTB17Q13105 803 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 CBX3Q13185 183 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 RRAGBQ5VZM2 374 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 MIS18BP1Q6P0N0 1132 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 RSRC2Q7L4I2 434 aaKnown RBP9.17□□□□□ -0.94
NDE1-202ENST00000396355 HS2ST1Q7LGA3 356 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 ECT2Q9H8V3 914 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 INTS9Q9NV88 658 aaKnown RBP9.17□□□□□ -0.94
NDE1-202ENST00000396355 TRIM10Q9UDY6 481 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 RBMX2Q9Y388 322 aaKnown RBP9.17□□□□□ -0.94
NDE1-202ENST00000396355 ALOX15P16050 662 aaPredicted RBP9.17□□□□□ -0.94
NDE1-202ENST00000396355 MDH1P40925 334 aaKnown RBP9.17□□□□□ -0.94
NDE1-202ENST00000396355 MCAMP43121 646 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 CYP27A1Q02318 531 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 CCDC15Q0P6D6 951 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 TBC1D25Q3MII6 688 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 CHADLQ6NUI6 762 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 CYP26C1Q6V0L0 522 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 VSTM4Q8IW00 320 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 FBXL16Q8N461 479 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms